RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W COX3P00420 269 aa2.5□□□□□ -2.01
NUP170YBL079W AI2P03876 854 aa2.5□□□□□ -2.01
NUP170YBL079W MATALPHA2P0CY08 210 aa2.5□□□□□ -2.01
NUP170YBL079W HMLALPHA2P0CY09 210 aa2.5□□□□□ -2.01
NUP170YBL079W PEX34P25584 144 aa2.5□□□□□ -2.01
NUP170YBL079W CBF2P32504 956 aa2.5□□□□□ -2.01
NUP170YBL079W SPT23P35210 1082 aa2.5□□□□□ -2.01
NUP170YBL079W PGM2P37012 569 aaKnown RBP2.5□□□□□ -2.01
NUP170YBL079W MAP2P38174 421 aaKnown RBP2.5□□□□□ -2.01
NUP170YBL079W KRS1P15180 591 aaKnown RBP2.49□□□□□ -2.01
NUP170YBL079W KIN82P25341 720 aa2.49□□□□□ -2.01
NUP170YBL079W TBS1P38114 1094 aa2.49□□□□□ -2.01
NUP170YBL079W UBS1P38290 277 aa2.49□□□□□ -2.01
NUP170YBL079W RPN10P38886 268 aaKnown RBP2.49□□□□□ -2.01
NUP170YBL079W SAK1P38990 1142 aa2.49□□□□□ -2.01
NUP170YBL079W SFB2P53953 876 aa2.49□□□□□ -2.01
NUP170YBL079W YPL014WQ02606 381 aa2.49□□□□□ -2.01
NUP170YBL079W EMI2Q04409 500 aaKnown RBP2.49□□□□□ -2.01
NUP170YBL079W COG8Q04632 607 aa2.49□□□□□ -2.01
NUP170YBL079W YMR321CQ04898 105 aa2.49□□□□□ -2.01
NUP170YBL079W YDR338CQ05497 695 aa2.49□□□□□ -2.01
NUP170YBL079W NOC3Q07896 663 aaPredicted RBP2.49□□□□□ -2.01
NUP170YBL079W SLK19Q08581 821 aaKnown RBP2.49□□□□□ -2.01
NUP170YBL079W STB3Q12427 513 aa2.49□□□□□ -2.01
NUP170YBL079W BRR1Q99177 341 aaPredicted RBP2.49□□□□□ -2.01
NUP170YBL079W PDR1P12383 1068 aa2.49□□□□□ -2.01
NUP170YBL079W ACE2P21192 770 aa2.49□□□□□ -2.01
NUP170YBL079W BMH1P29311 267 aaKnown RBP2.49□□□□□ -2.01
NUP170YBL079W IMP2'P32351 346 aa2.49□□□□□ -2.01
NUP170YBL079W TMT1P32643 299 aa2.49□□□□□ -2.01
NUP170YBL079W EBP2P36049 427 aaKnown RBP2.49□□□□□ -2.01
NUP170YBL079W ARP1P38696 384 aa2.49□□□□□ -2.01
NUP170YBL079W NPR3P38742 1146 aa2.49□□□□□ -2.01
NUP170YBL079W NUP60P39705 539 aa2.49□□□□□ -2.01
NUP170YBL079W DAN4P47179 1161 aa2.49□□□□□ -2.01
NUP170YBL079W SDA1P53313 767 aaKnown RBP2.49□□□□□ -2.01
NUP170YBL079W CAF120P53836 1060 aa2.49□□□□□ -2.01
NUP170YBL079W DOS2P54858 310 aa2.49□□□□□ -2.01
NUP170YBL079W GIR2Q03768 265 aaPredicted RBP2.49□□□□□ -2.01
NUP170YBL079W COQ9Q05779 260 aa2.49□□□□□ -2.01
NUP170YBL079W NKP2Q06162 153 aa2.49□□□□□ -2.01
NUP170YBL079W SVS1Q12254 260 aa2.49□□□□□ -2.01
NUP170YBL079W ERG6P25087 383 aaKnown RBP2.49□□□□□ -2.01
NUP170YBL079W PAT1P25644 796 aaKnown RBP2.49□□□□□ -2.01
NUP170YBL079W PXA2P34230 853 aa2.49□□□□□ -2.01
NUP170YBL079W YMC2P38087 329 aa2.49□□□□□ -2.01
NUP170YBL079W BAT1P38891 393 aaKnown RBP2.49□□□□□ -2.01
NUP170YBL079W HFM1P51979 1187 aa2.49□□□□□ -2.01
NUP170YBL079W YTP1P53584 459 aa2.49□□□□□ -2.01
NUP170YBL079W YNL115CP53925 644 aa2.49□□□□□ -2.01
NUP170YBL079W YVC1Q12324 675 aa2.49□□□□□ -2.01
NUP170YBL079W ARP6Q12509 438 aa2.49□□□□□ -2.01
NUP170YBL079W AEP2P22136 580 aa2.49□□□□□ -2.01
NUP170YBL079W CHL1P22516 861 aaPredicted RBP2.49□□□□□ -2.01
NUP170YBL079W RSA4P25382 515 aaKnown RBP2.49□□□□□ -2.01
NUP170YBL079W TFB1P32776 642 aa2.49□□□□□ -2.01
NUP170YBL079W OSW5P40219 148 aa2.49□□□□□ -2.01
NUP170YBL079W TAM41P53230 385 aa2.49□□□□□ -2.01
NUP170YBL079W ORC4P54791 529 aa2.49□□□□□ -2.01
NUP170YBL079W YDL057WQ07379 328 aa2.49□□□□□ -2.01
NUP170YBL079W NCR1Q12200 1170 aa2.49□□□□□ -2.01
NUP170YBL079W MET6P05694 767 aaKnown RBP2.48□□□□□ -2.01
NUP170YBL079W FLR1P38124 548 aa2.48□□□□□ -2.01
NUP170YBL079W RPS7BP48164 190 aaKnown RBP2.48□□□□□ -2.01
NUP170YBL079W UTP8P53276 713 aaKnown RBP2.48□□□□□ -2.01
NUP170YBL079W YNR065CP53751 1116 aa2.48□□□□□ -2.01
NUP170YBL079W TSR1Q07381 788 aaKnown RBP2.48□□□□□ -2.01
NUP170YBL079W YPL277CQ08989 487 aa2.48□□□□□ -2.01
NUP170YBL079W RRP6Q12149 733 aaKnown RBP2.48□□□□□ -2.01
NUP170YBL079W MLS1P30952 554 aa2.48□□□□□ -2.01
NUP170YBL079W TVP23P38962 199 aa2.48□□□□□ -2.01
NUP170YBL079W GDH3P39708 457 aa2.48□□□□□ -2.01
NUP170YBL079W PTI1P39927 425 aaPredicted RBP2.48□□□□□ -2.01
NUP170YBL079W ACF4P47129 309 aa2.48□□□□□ -2.01
NUP170YBL079W PEX31P53203 462 aa2.48□□□□□ -2.01
NUP170YBL079W SFI1Q12369 946 aa2.48□□□□□ -2.01
NUP170YBL079W GAC1P28006 793 aa2.48□□□□□ -2.01
NUP170YBL079W TKL2P33315 681 aa2.48□□□□□ -2.01
NUP170YBL079W YKT6P36015 200 aaKnown RBP2.48□□□□□ -2.01
NUP170YBL079W ECM13P38195 257 aa2.48□□□□□ -2.01
NUP170YBL079W SIP3P38717 1229 aa2.48□□□□□ -2.01
NUP170YBL079W NAB3P38996 802 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
NUP170YBL079W YJL132WP47014 750 aa2.48□□□□□ -2.01
NUP170YBL079W VPS70P47161 811 aa2.48□□□□□ -2.01
NUP170YBL079W INP52P50942 1183 aa2.48□□□□□ -2.01
NUP170YBL079W CAF130P53280 1122 aaPredicted RBP2.48□□□□□ -2.01
NUP170YBL079W TMN2Q04562 672 aa2.48□□□□□ -2.01
NUP170YBL079W JIP5Q06214 492 aaPredicted RBP2.48□□□□□ -2.01
NUP170YBL079W REC8Q12188 680 aa2.48□□□□□ -2.01
NUP170YBL079W STE4P18851 423 aa2.47□□□□□ -2.01
NUP170YBL079W MSH1P25846 959 aa2.47□□□□□ -2.01
NUP170YBL079W YKL091CP33324 310 aaKnown RBP2.47□□□□□ -2.01
NUP170YBL079W SEG2P34250 1132 aa2.47□□□□□ -2.01
NUP170YBL079W AIM9P40053 627 aaKnown RBP2.47□□□□□ -2.01
NUP170YBL079W PSY2P40164 858 aa2.47□□□□□ -2.01
NUP170YBL079W VMA13P41807 478 aaKnown RBP2.47□□□□□ -2.01
NUP170YBL079W COQ5P49017 307 aa2.47□□□□□ -2.01
NUP170YBL079W PYK2P52489 506 aaKnown RBP2.47□□□□□ -2.01
NUP170YBL079W YGR122WP53272 402 aa2.47□□□□□ -2.01
NUP170YBL079W KRE33P53914 1056 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 70 ms