RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLN3	YAL040C	DED1	P06634	604 aa	Known RBP	2.68	□□□□□ -1.98
CLN3	YAL040C	HEM13	P11353	328 aa	Known RBP	2.68	□□□□□ -1.98
CLN3	YAL040C	PCT1	P13259	424 aa		2.68	□□□□□ -1.98
CLN3	YAL040C	IME2	P32581	645 aa		2.68	□□□□□ -1.98
CLN3	YAL040C	RPT1	P33299	467 aa	Known RBP	2.68	□□□□□ -1.98
CLN3	YAL040C	ECM21	P38167	1117 aa	Known RBP	2.68	□□□□□ -1.98
CLN3	YAL040C	ALG3	P38179	458 aa		2.68	□□□□□ -1.98
CLN3	YAL040C	TAT2	P38967	592 aa		2.68	□□□□□ -1.98
CLN3	YAL040C	MEF2	P39677	819 aa		2.68	□□□□□ -1.98
CLN3	YAL040C	ENT3	P47160	408 aa		2.68	□□□□□ -1.98
CLN3	YAL040C	SPR28	Q04921	423 aa		2.68	□□□□□ -1.98
CLN3	YAL040C	RPN7	Q06103	429 aa	Known RBP	2.68	□□□□□ -1.98
CLN3	YAL040C	TOS4	Q06266	489 aa		2.68	□□□□□ -1.98
CLN3	YAL040C	YDL121C	Q07541	149 aa		2.68	□□□□□ -1.98
CLN3	YAL040C	RCL1	Q08096	367 aa	Predicted RBP	2.68	□□□□□ -1.98
CLN3	YAL040C	PPM2	Q08282	695 aa		2.68	□□□□□ -1.98
CLN3	YAL040C	MCD1	Q12158	566 aa		2.68	□□□□□ -1.98
CLN3	YAL040C	PDR18	P53756	1333 aa		2.67	□□□□□ -1.98
CLN3	YAL040C	GSC2	P40989	1895 aa		2.67	□□□□□ -1.98
CLN3	YAL040C	CYC1	P00044	109 aa	Predicted RBP	2.67	□□□□□ -1.98
CLN3	YAL040C	TUB2	P02557	457 aa	Known RBP	2.67	□□□□□ -1.98
CLN3	YAL040C	SNF5	P18480	905 aa		2.67	□□□□□ -1.98
CLN3	YAL040C	PRE9	P23638	258 aa	Known RBP	2.67	□□□□□ -1.98
CLN3	YAL040C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	not detected
CLN3	YAL040C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	not detected
CLN3	YAL040C	PIC2	P40035	300 aa		2.67	□□□□□ -1.98
CLN3	YAL040C	YNL193W	P53870	558 aa		2.67	□□□□□ -1.98
CLN3	YAL040C	RSM24	Q03976	319 aa		2.67	□□□□□ -1.98
CLN3	YAL040C	BUG1	Q12191	341 aa		2.67	□□□□□ -1.98
CLN3	YAL040C	SAC3	P46674	1301 aa		2.67	□□□□□ -1.98
CLN3	YAL040C	MET6	P05694	767 aa	Known RBP	2.66	□□□□□ -1.98
CLN3	YAL040C	VAS1	P07806	1104 aa	Known RBP	2.66	□□□□□ -1.98
CLN3	YAL040C	SEC18	P18759	758 aa	Known RBP	2.66	□□□□□ -1.98
CLN3	YAL040C	MRC1	P25588	1096 aa		2.66	□□□□□ -1.98
CLN3	YAL040C	MCM2	P29469	868 aa		2.66	□□□□□ -1.98
CLN3	YAL040C	MNN4	P36044	1178 aa		2.66	□□□□□ -1.98
CLN3	YAL040C	AAP1	P37898	856 aa	Known RBP	2.66	□□□□□ -1.98
CLN3	YAL040C	YMR147W	P40218	223 aa	Known RBP	2.66	□□□□□ -1.98
CLN3	YAL040C	DJP1	P40564	432 aa		2.66	□□□□□ -1.98
CLN3	YAL040C	YIR014W	P40570	242 aa		2.66	□□□□□ -1.98
CLN3	YAL040C	MRPS18	P42847	217 aa		2.66	□□□□□ -1.98
CLN3	YAL040C	YGL242C	P53066	181 aa		2.66	□□□□□ -1.98
CLN3	YAL040C	TMA64	Q04600	565 aa	Known RBP	2.66	□□□□□ -1.98
CLN3	YAL040C	BRE1	Q07457	700 aa	Known RBP	2.66	□□□□□ -1.98
CLN3	YAL040C	RIM20	Q12033	661 aa		2.66	□□□□□ -1.98
CLN3	YAL040C	KIN2	P13186	1147 aa	Known RBP	2.65	□□□□□ -1.98
CLN3	YAL040C	CYC8	P14922	966 aa		2.65	□□□□□ -1.98
CLN3	YAL040C	PWP2	P25635	923 aa	Known RBP	2.65	□□□□□ -1.98
CLN3	YAL040C	SEC6	P32844	805 aa		2.65	□□□□□ -1.98
CLN3	YAL040C	DOM34	P33309	386 aa		2.65	□□□□□ -1.98
CLN3	YAL040C	PET112	P33893	541 aa		2.65	□□□□□ -1.98
CLN3	YAL040C	VPS24	P36095	224 aa	Known RBP	2.65	□□□□□ -1.98
CLN3	YAL040C	RGD1	P38339	666 aa		2.65	□□□□□ -1.98
CLN3	YAL040C	NUP82	P40368	713 aa		2.65	□□□□□ -1.98
CLN3	YAL040C	SIW14	P53965	281 aa		2.65	□□□□□ -1.98
CLN3	YAL040C	ROD1	Q02805	837 aa		2.65	□□□□□ -1.98
CLN3	YAL040C	ROT1	Q03691	256 aa		2.65	□□□□□ -1.98
CLN3	YAL040C	ECM16	Q04217	1267 aa	Known RBP	2.65	□□□□□ -1.98
CLN3	YAL040C	THI3	Q07471	609 aa		2.65	□□□□□ -1.98
CLN3	YAL040C	NKP1	Q12493	238 aa		2.65	□□□□□ -1.98
CLN3	YAL040C	NCB2	Q92317	146 aa		2.65	□□□□□ -1.98
CLN3	YAL040C	FLO1	P32768	1537 aa		2.65	□□□□□ -1.99
CLN3	YAL040C	KAR1	P11927	433 aa		2.65	□□□□□ -1.99
CLN3	YAL040C	GAL11	P19659	1081 aa		2.65	□□□□□ -1.99
CLN3	YAL040C	DPB3	P27344	201 aa		2.65	□□□□□ -1.99
CLN3	YAL040C	RPT3	P33298	428 aa	Known RBP	2.65	□□□□□ -1.99
CLN3	YAL040C	GRX7	P38068	203 aa		2.65	□□□□□ -1.99
CLN3	YAL040C	RFC5	P38251	354 aa		2.65	□□□□□ -1.99
CLN3	YAL040C	SPL2	P38839	148 aa		2.65	□□□□□ -1.99
CLN3	YAL040C	YIR042C	P40586	236 aa		2.65	□□□□□ -1.99
CLN3	YAL040C	TY4A-J	P47023	414 aa		2.65	□□□□□ -1.99
CLN3	YAL040C	NPA3	P47122	385 aa		2.65	□□□□□ -1.99
CLN3	YAL040C	HUL5	P53119	910 aa		2.65	□□□□□ -1.99
CLN3	YAL040C	MLC1	P53141	149 aa		2.65	□□□□□ -1.99
CLN3	YAL040C	PBP1	P53297	722 aa	Known RBP	2.65	□□□□□ -1.99
CLN3	YAL040C	RAT1	Q02792	1006 aa	Known RBP	2.65	□□□□□ -1.99
CLN3	YAL040C	GIS1	Q03833	894 aa		2.65	□□□□□ -1.99
CLN3	YAL040C	RXT3	Q07458	294 aa		2.65	□□□□□ -1.99
CLN3	YAL040C	YLR125W	Q12138	136 aa		2.65	□□□□□ -1.99
CLN3	YAL040C	PNS1	Q12412	539 aa		2.65	□□□□□ -1.99
CLN3	YAL040C	SNU66	Q12420	587 aa	Predicted RBP	2.65	□□□□□ -1.99
CLN3	YAL040C	PGA3	Q12746	312 aa	Known RBP	2.65	□□□□□ -1.99
CLN3	YAL040C	ADR1	P07248	1323 aa		2.65	□□□□□ -1.99
CLN3	YAL040C	GAL10	P04397	699 aa		2.64	□□□□□ -1.99
CLN3	YAL040C	PHO8	P11491	566 aa		2.64	□□□□□ -1.99
CLN3	YAL040C	CMP2	P14747	604 aa		2.64	□□□□□ -1.99
CLN3	YAL040C	MGM1	P32266	881 aa		2.64	□□□□□ -1.99
CLN3	YAL040C	SMY1	P32364	656 aa	Known RBP	2.64	□□□□□ -1.99
CLN3	YAL040C	FRD1	P32614	470 aa	Known RBP	2.64	□□□□□ -1.99
CLN3	YAL040C	PBY1	P38254	753 aa		2.64	□□□□□ -1.99
CLN3	YAL040C	LAM4	P38800	1345 aa		2.64	□□□□□ -1.99
CLN3	YAL040C	POM152	P39685	1337 aa		2.64	□□□□□ -1.99
CLN3	YAL040C	RPS26A	P39938	119 aa	Known RBP	2.64	□□□□□ -1.99
CLN3	YAL040C	RPS26B	P39939	119 aa	Known RBP	2.64	□□□□□ -1.99
CLN3	YAL040C	YEN1	P40028	759 aa		2.64	□□□□□ -1.99
CLN3	YAL040C	NAN1	Q02931	896 aa	Known RBP	2.64	□□□□□ -1.99
CLN3	YAL040C	VPS20	Q04272	221 aa		2.64	□□□□□ -1.99
CLN3	YAL040C	DUS4	Q06063	367 aa		2.64	□□□□□ -1.99
CLN3	YAL040C	THS1	P04801	734 aa	Known RBP	2.63	□□□□□ -1.99
CLN3	YAL040C	STE11	P23561	717 aa		2.63	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 30 ms