RNA–Protein interactions for RNA: ENST00000630607.2

UBE3A-221, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 3

Gene UBE3A, Length 1,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-221ENST00000630607 PCDHGA11Q9Y5H2 935 aa10.35□□□□□ -0.75
UBE3A-221ENST00000630607 CNTLNQ9NXG0 1405 aa10.34□□□□□ -0.75
UBE3A-221ENST00000630607 SCGB1D2O95969 90 aa10.34□□□□□ -0.75
UBE3A-221ENST00000630607 SQSTM1Q13501 440 aa10.34□□□□□ -0.75
UBE3A-221ENST00000630607 PAF1Q8N7H5 531 aa10.34□□□□□ -0.75
UBE3A-221ENST00000630607 PDILTQ8N807 584 aa10.34□□□□□ -0.75
UBE3A-221ENST00000630607 CXorf38Q8TB03 319 aa10.34□□□□□ -0.75
UBE3A-221ENST00000630607 ZDHHC16Q969W1 377 aa10.34□□□□□ -0.75
UBE3A-221ENST00000630607 TPX2Q9ULW0 747 aaKnown RBP10.34□□□□□ -0.75
UBE3A-221ENST00000630607 MTUS2Q5JR59 1369 aa10.34□□□□□ -0.75
UBE3A-221ENST00000630607 POLA1P09884 1462 aaPredicted RBP10.34□□□□□ -0.75
UBE3A-221ENST00000630607 SLC10A3P09131 477 aa10.34□□□□□ -0.75
UBE3A-221ENST00000630607 POU5F1Q01860 360 aaKnown RBP10.34□□□□□ -0.75
UBE3A-221ENST00000630607 LYPD8Q6UX82 237 aa10.34□□□□□ -0.75
UBE3A-221ENST00000630607 C14orf80Q86SX3 495 aa10.34□□□□□ -0.75
UBE3A-221ENST00000630607 OCSTAMPQ9BR26 566 aa10.34□□□□□ -0.75
UBE3A-221ENST00000630607 ADAM33Q9BZ11 813 aa10.34□□□□□ -0.75
UBE3A-221ENST00000630607 SAP130Q9H0E3 1048 aa10.34□□□□□ -0.75
UBE3A-221ENST00000630607 DOLKQ9UPQ8 538 aa10.34□□□□□ -0.75
UBE3A-221ENST00000630607 LZTS1Q9Y250 596 aa10.34□□□□□ -0.75
UBE3A-221ENST00000630607 TOPBP1Q92547 1522 aa10.34□□□□□ -0.75
UBE3A-221ENST00000630607 NASPP49321 788 aaPredicted RBP10.33□□□□□ -0.76
UBE3A-221ENST00000630607 ICE2Q659A1 982 aa10.33□□□□□ -0.76
UBE3A-221ENST00000630607 DESI1Q6ICB0 168 aa10.33□□□□□ -0.76
UBE3A-221ENST00000630607 SVIPQ8NHG7 77 aa10.33□□□□□ -0.76
UBE3A-221ENST00000630607 ZHX3Q9H4I2 956 aa10.33□□□□□ -0.76
UBE3A-221ENST00000630607 COPRSQ9NQ92 184 aa10.33□□□□□ -0.76
UBE3A-221ENST00000630607 NPHP1O15259 732 aa10.32□□□□□ -0.76
UBE3A-221ENST00000630607 COL6A1P12109 1028 aa10.32□□□□□ -0.76
UBE3A-221ENST00000630607 CCDC184Q52MB2 194 aa10.32□□□□□ -0.76
UBE3A-221ENST00000630607 NKX2-3Q8TAU0 364 aa10.32□□□□□ -0.76
UBE3A-221ENST00000630607 FBF1Q8TES7 1133 aa10.32□□□□□ -0.76
UBE3A-221ENST00000630607 TRIM52Q96A61 297 aa10.32□□□□□ -0.76
UBE3A-221ENST00000630607 EMID1Q96A84 441 aaPredicted RBP10.32□□□□□ -0.76
UBE3A-221ENST00000630607 ZNF700Q9H0M5 742 aa10.32□□□□□ -0.76
UBE3A-221ENST00000630607 MIA2Q96PC5 1412 aa10.32□□□□□ -0.76
UBE3A-221ENST00000630607 LRRIQ1Q96JM4 1722 aa10.32□□□□□ -0.76
UBE3A-221ENST00000630607 SHTN1A0MZ66 631 aa10.32□□□□□ -0.76
UBE3A-221ENST00000630607 TBX3O15119 743 aa10.32□□□□□ -0.76
UBE3A-221ENST00000630607 ATF3P18847 181 aa10.32□□□□□ -0.76
UBE3A-221ENST00000630607 MEI1Q5TIA1 1274 aa10.32□□□□□ -0.76
UBE3A-221ENST00000630607 RUNDC1Q96C34 613 aa10.32□□□□□ -0.76
UBE3A-221ENST00000630607 NEUROD6Q96NK8 337 aa10.32□□□□□ -0.76
UBE3A-221ENST00000630607 BMP2KQ9NSY1 1161 aaPredicted RBP10.32□□□□□ -0.76
UBE3A-221ENST00000630607 PPP4R2Q9NY27 417 aa10.32□□□□□ -0.76
UBE3A-221ENST00000630607 LEMD3Q9Y2U8 911 aa10.32□□□□□ -0.76
UBE3A-221ENST00000630607 PTPRKQ15262 1439 aa10.31□□□□□ -0.76
UBE3A-221ENST00000630607 USP31Q70CQ4 1352 aa10.31□□□□□ -0.76
UBE3A-221ENST00000630607 KCNQ2O43526 872 aa10.31□□□□□ -0.76
UBE3A-221ENST00000630607 LDHCP07864 332 aa10.31□□□□□ -0.76
UBE3A-221ENST00000630607 FUT2Q10981 343 aa10.31□□□□□ -0.76
UBE3A-221ENST00000630607 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.31□□□□□ -0.76
UBE3A-221ENST00000630607 EIF4BP23588 611 aaKnown RBP10.3□□□□□ -0.76
UBE3A-221ENST00000630607 CNGA1P29973 690 aa10.3□□□□□ -0.76
UBE3A-221ENST00000630607 RASSF7Q02833 373 aa10.3□□□□□ -0.76
UBE3A-221ENST00000630607 TMEM95Q3KNT9 176 aa10.3□□□□□ -0.76
UBE3A-221ENST00000630607 ERMP1Q7Z2K6 904 aa10.3□□□□□ -0.76
UBE3A-221ENST00000630607 PPCSQ9HAB8 311 aa10.3□□□□□ -0.76
UBE3A-221ENST00000630607 PNMA3Q9UL41 463 aa10.3□□□□□ -0.76
UBE3A-221ENST00000630607 NCOA1Q15788 1441 aa10.3□□□□□ -0.76
UBE3A-221ENST00000630607 ESPNB1AK53 854 aa10.3□□□□□ -0.76
UBE3A-221ENST00000630607 INO80DQ53TQ3 878 aaPredicted RBP10.3□□□□□ -0.76
UBE3A-221ENST00000630607 RETREG3Q86VR2 466 aa10.3□□□□□ -0.76
UBE3A-221ENST00000630607 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.3□□□□□ -0.76
UBE3A-221ENST00000630607 SECISBP2LQ93073 1101 aaKnown RBP10.3□□□□□ -0.76
UBE3A-221ENST00000630607 TATDN2Q93075 761 aa10.3□□□□□ -0.76
UBE3A-221ENST00000630607 ZBED9Q6R2W3 1325 aa10.29□□□□□ -0.76
UBE3A-221ENST00000630607 MCL1Q07820 350 aa10.29□□□□□ -0.76
UBE3A-221ENST00000630607 DALRD3Q5D0E6 543 aaKnown RBP10.29□□□□□ -0.76
UBE3A-221ENST00000630607 MSRB2Q9Y3D2 182 aa10.29□□□□□ -0.76
UBE3A-221ENST00000630607 KDM4FA0A1W2PPD8 638 aa10.28□□□□□ -0.76
UBE3A-221ENST00000630607 NBPF26B4DH59 902 aa10.28□□□□□ -0.76
UBE3A-221ENST00000630607 TIMM44O43615 452 aa10.28□□□□□ -0.76
UBE3A-221ENST00000630607 ALKBH2Q6NS38 261 aa10.28□□□□□ -0.76
UBE3A-221ENST00000630607 DDX42Q86XP3 938 aaKnown RBP eCLIP10.28□□□□□ -0.76
UBE3A-221ENST00000630607 MYO1HQ8N1T3 1032 aa10.28□□□□□ -0.76
UBE3A-221ENST00000630607 ZNF454Q8N9F8 522 aa10.28□□□□□ -0.76
UBE3A-221ENST00000630607 ENOX1Q8TC92 643 aaKnown RBP10.28□□□□□ -0.76
UBE3A-221ENST00000630607 PTPRHQ9HD43 1115 aa10.28□□□□□ -0.76
UBE3A-221ENST00000630607 MAP10Q9P2G4 905 aa10.28□□□□□ -0.76
UBE3A-221ENST00000630607 HNRNPUQ00839 825 aaKnown RBP eCLIP10.27□□□□□ -0.76
UBE3A-221ENST00000630607 CCDC174Q6PII3 467 aa10.27□□□□□ -0.76
UBE3A-221ENST00000630607 EFR3BQ9Y2G0 817 aa10.27□□□□□ -0.76
UBE3A-221ENST00000630607 RPGRIP1LQ68CZ1 1315 aa10.27□□□□□ -0.76
UBE3A-221ENST00000630607 ROCK1Q13464 1354 aa10.27□□□□□ -0.77
UBE3A-221ENST00000630607 FOXO3O43524 673 aa10.27□□□□□ -0.77
UBE3A-221ENST00000630607 F12P00748 615 aaPredicted RBP10.27□□□□□ -0.77
UBE3A-221ENST00000630607 CALRP27797 417 aaKnown RBP10.27□□□□□ -0.77
UBE3A-221ENST00000630607 IRX5P78411 483 aaPredicted RBP10.27□□□□□ -0.77
UBE3A-221ENST00000630607 KCTD2Q14681 263 aa10.27□□□□□ -0.77
UBE3A-221ENST00000630607 C16orf46Q6P387 395 aa10.27□□□□□ -0.77
UBE3A-221ENST00000630607 KSR2Q6VAB6 950 aa10.27□□□□□ -0.77
UBE3A-221ENST00000630607 AS3MTQ9HBK9 375 aa10.27□□□□□ -0.77
UBE3A-221ENST00000630607 SPG7Q9UQ90 795 aa10.27□□□□□ -0.77
UBE3A-221ENST00000630607 MRPS23Q9Y3D9 190 aaKnown RBP10.27□□□□□ -0.77
UBE3A-221ENST00000630607 WASHC2AQ641Q2 1341 aa10.27□□□□□ -0.77
UBE3A-221ENST00000630607 LAMC3Q9Y6N6 1575 aa10.27□□□□□ -0.77
UBE3A-221ENST00000630607 CD44P16070 742 aaKnown RBP10.26□□□□□ -0.77
UBE3A-221ENST00000630607 COL9A1P20849 921 aa10.26□□□□□ -0.77
UBE3A-221ENST00000630607 HLTFQ14527 1009 aaKnown RBP eCLIP10.26□□□□□ -0.774e-6■■■□□ 17.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms