RNA–Protein interactions for RNA: ENST00000295006.5

CAPN2-201, Transcript of calpain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN2, Length 3,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-201ENST00000295006 COL9A3Q14050 684 aaPredicted RBP18.2■□□□□ 0.5
CAPN2-201ENST00000295006 BIN1O00499 593 aa18.2■□□□□ 0.5
CAPN2-201ENST00000295006 APOBRQ0VD83 1088 aa18.2■□□□□ 0.5
CAPN2-201ENST00000295006 LRMPQ12912 555 aa18.2■□□□□ 0.5
CAPN2-201ENST00000295006 SALL3Q9BXA9 1300 aa18.2■□□□□ 0.5
CAPN2-201ENST00000295006 AOX1Q06278 1338 aa18.19■□□□□ 0.5
CAPN2-201ENST00000295006 DYNC1I1O14576 645 aa18.19■□□□□ 0.5
CAPN2-201ENST00000295006 ZNF496Q96IT1 587 aaPredicted RBP18.19■□□□□ 0.5
CAPN2-201ENST00000295006 TTC14Q96N46 770 aa18.19■□□□□ 0.5
CAPN2-201ENST00000295006 ZSWIM6Q9HCJ5 1215 aa18.19■□□□□ 0.5
CAPN2-201ENST00000295006 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.19■□□□□ 0.5
CAPN2-201ENST00000295006 MAP7D2Q96T17 732 aa18.19■□□□□ 0.5
CAPN2-201ENST00000295006 DDX21Q9NR30 783 aaKnown RBP eCLIP18.19■□□□□ 0.5
CAPN2-201ENST00000295006 ATP2B1P20020 1258 aa18.18■□□□□ 0.5
CAPN2-201ENST00000295006 CLIP2Q9UDT6 1046 aa18.18■□□□□ 0.5
CAPN2-201ENST00000295006 PYCARDQ9ULZ3 195 aa18.18■□□□□ 0.5
CAPN2-201ENST00000295006 OTUD7BQ6GQQ9 843 aa18.18■□□□□ 0.5
CAPN2-201ENST00000295006 ZNF790Q6PG37 636 aa18.18■□□□□ 0.5
CAPN2-201ENST00000295006 FAM200AQ8TCP9 573 aa18.18■□□□□ 0.5
CAPN2-201ENST00000295006 FTOQ9C0B1 505 aaKnown RBP eCLIP18.18■□□□□ 0.5
CAPN2-201ENST00000295006 STRN4Q9NRL3 753 aa18.18■□□□□ 0.5
CAPN2-201ENST00000295006 ZHX1Q9UKY1 873 aaPredicted RBP18.18■□□□□ 0.5
CAPN2-201ENST00000295006 SYTL4Q96C24 671 aaPredicted RBP18.17■□□□□ 0.5
CAPN2-201ENST00000295006 ZNF594Q96JF6 807 aaPredicted RBP18.17■□□□□ 0.5
CAPN2-201ENST00000295006 EPHA10Q5JZY3 1008 aa18.17■□□□□ 0.5
CAPN2-201ENST00000295006 NRBP1Q9UHY1 535 aa18.17■□□□□ 0.5
CAPN2-201ENST00000295006 SMC2O95347 1197 aa18.17■□□□□ 0.5
CAPN2-201ENST00000295006 RPS6KB1P23443 525 aa18.17■□□□□ 0.5
CAPN2-201ENST00000295006 PPP4R3BQ5MIZ7 849 aa18.17■□□□□ 0.5
CAPN2-201ENST00000295006 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.16■□□□□ 0.5
CAPN2-201ENST00000295006 V9GYY5 206 aaPredicted RBP18.16■□□□□ 0.5
CAPN2-201ENST00000295006 RPAP1Q9BWH6 1393 aaPredicted RBP18.16■□□□□ 0.5
CAPN2-201ENST00000295006 DLG5Q8TDM6 1919 aa18.16■□□□□ 0.5
CAPN2-201ENST00000295006 NR1I2O75469 434 aa18.16■□□□□ 0.5
CAPN2-201ENST00000295006 STK38Q15208 465 aa18.16■□□□□ 0.5
CAPN2-201ENST00000295006 PIBF1Q8WXW3 757 aa18.16■□□□□ 0.5
CAPN2-201ENST00000295006 SSH2Q76I76 1423 aa18.16■□□□□ 0.5
CAPN2-201ENST00000295006 IFIT1P09914 478 aaKnown RBP18.16■□□□□ 0.5
CAPN2-201ENST00000295006 ATF3P18847 181 aa18.16■□□□□ 0.5
CAPN2-201ENST00000295006 AXIN2Q9Y2T1 843 aa18.16■□□□□ 0.5
CAPN2-201ENST00000295006 CCAR1Q8IX12 1150 aaKnown RBP18.15■□□□□ 0.5
CAPN2-201ENST00000295006 USP31Q70CQ4 1352 aa18.15■□□□□ 0.5
CAPN2-201ENST00000295006 KRT32Q14532 448 aa18.15■□□□□ 0.5
CAPN2-201ENST00000295006 RALYLQ86SE5 291 aaKnown RBP18.15■□□□□ 0.5
CAPN2-201ENST00000295006 CFAP45Q9UL16 551 aa18.15■□□□□ 0.5
CAPN2-201ENST00000295006 PLEKHG1Q9ULL1 1385 aa18.15■□□□□ 0.5
CAPN2-201ENST00000295006 ADAMTS13Q76LX8 1427 aa18.15■□□□□ 0.5
CAPN2-201ENST00000295006 NECTIN1Q15223 517 aa18.15■□□□□ 0.5
CAPN2-201ENST00000295006 SYNE3Q6ZMZ3 975 aa18.15■□□□□ 0.5
CAPN2-201ENST00000295006 CBX8Q9HC52 389 aa18.15■□□□□ 0.5
CAPN2-201ENST00000295006 DLC1Q96QB1 1528 aa18.14■□□□□ 0.5
CAPN2-201ENST00000295006 KNDC1Q76NI1 1749 aa18.14■□□□□ 0.5
CAPN2-201ENST00000295006 TNNT1P13805 278 aa18.14■□□□□ 0.49
CAPN2-201ENST00000295006 GCKRQ14397 625 aa18.14■□□□□ 0.49
CAPN2-201ENST00000295006 CREBRFQ8IUR6 639 aa18.14■□□□□ 0.49
CAPN2-201ENST00000295006 PDCL2Q8N4E4 241 aa18.14■□□□□ 0.49
CAPN2-201ENST00000295006 LEO1Q8WVC0 666 aaPredicted RBP18.14■□□□□ 0.49
CAPN2-201ENST00000295006 ADCY9O60503 1353 aa18.14■□□□□ 0.49
CAPN2-201ENST00000295006 CCDC144CPQ8IYA2 1237 aa18.14■□□□□ 0.49
CAPN2-201ENST00000295006 MAP4K1Q92918 833 aa18.14■□□□□ 0.49
CAPN2-201ENST00000295006 FSIP1Q8NA03 581 aa18.14■□□□□ 0.49
CAPN2-201ENST00000295006 PTPRUQ92729 1446 aa18.13■□□□□ 0.49
CAPN2-201ENST00000295006 TOM1L2Q6ZVM7 507 aa18.13■□□□□ 0.49
CAPN2-201ENST00000295006 DBNLQ9UJU6 430 aaKnown RBP18.13■□□□□ 0.49
CAPN2-201ENST00000295006 NEURL1BA8MQ27 555 aa18.13■□□□□ 0.49
CAPN2-201ENST00000295006 CCDC82Q8N4S0 544 aa18.13■□□□□ 0.49
CAPN2-201ENST00000295006 KDRP35968 1356 aa18.13■□□□□ 0.49
CAPN2-201ENST00000295006 MCMDC2Q4G0Z9 681 aa18.12■□□□□ 0.49
CAPN2-201ENST00000295006 TNNI3KQ59H18 835 aa18.12■□□□□ 0.49
CAPN2-201ENST00000295006 BABAM1Q9NWV8 329 aa18.12■□□□□ 0.49
CAPN2-201ENST00000295006 FPGT-TNNI3KV9GXZ4 949 aa18.12■□□□□ 0.49
CAPN2-201ENST00000295006 TTC39AQ5SRH9 613 aa18.12■□□□□ 0.49
CAPN2-201ENST00000295006 NFXL1Q6ZNB6 911 aa18.12■□□□□ 0.49
CAPN2-201ENST00000295006 CEP126Q9P2H0 1117 aa18.12■□□□□ 0.49
CAPN2-201ENST00000295006 RIMS1Q86UR5 1692 aaKnown RBP18.12■□□□□ 0.49
CAPN2-201ENST00000295006 RIOK3O14730 519 aaKnown RBP18.12■□□□□ 0.49
CAPN2-201ENST00000295006 IGKV5-2P06315 115 aa18.12■□□□□ 0.49
CAPN2-201ENST00000295006 HOMER1Q86YM7 354 aa18.12■□□□□ 0.49
CAPN2-201ENST00000295006 FAM177A1Q8N128 213 aaPredicted RBP18.12■□□□□ 0.49
CAPN2-201ENST00000295006 DDX19AQ9NUU7 478 aaKnown RBP18.12■□□□□ 0.49
CAPN2-201ENST00000295006 SNRPA1P09661 255 aaKnown RBP18.11■□□□□ 0.49
CAPN2-201ENST00000295006 HSP90AA4PQ58FG1 418 aa18.11■□□□□ 0.49
CAPN2-201ENST00000295006 U3KPZ7 1027 aaPredicted RBP18.11■□□□□ 0.49
CAPN2-201ENST00000295006 CCDC112Q8NEF3 446 aa18.11■□□□□ 0.49
CAPN2-201ENST00000295006 RXRAP19793 462 aa18.11■□□□□ 0.49
CAPN2-201ENST00000295006 TTLL5Q6EMB2 1281 aa18.11■□□□□ 0.49
CAPN2-201ENST00000295006 NPHP3Q7Z494 1330 aa18.11■□□□□ 0.49
CAPN2-201ENST00000295006 NRDCO43847 1150 aa18.1■□□□□ 0.49
CAPN2-201ENST00000295006 HOXB7P09629 217 aa18.1■□□□□ 0.49
CAPN2-201ENST00000295006 GPTP24298 496 aa18.1■□□□□ 0.49
CAPN2-201ENST00000295006 EVA1CP58658 441 aa18.1■□□□□ 0.49
CAPN2-201ENST00000295006 CCDC57Q2TAC2 916 aa18.1■□□□□ 0.49
CAPN2-201ENST00000295006 RRP12Q5JTH9 1297 aaKnown RBP18.1■□□□□ 0.49
CAPN2-201ENST00000295006 PTPDC1A2A3K4 754 aa18.1■□□□□ 0.49
CAPN2-201ENST00000295006 TRDNQ13061 729 aa18.1■□□□□ 0.49
CAPN2-201ENST00000295006 IFNL2Q8IZJ0 200 aa18.1■□□□□ 0.49
CAPN2-201ENST00000295006 TAF5LO75529 589 aa18.1■□□□□ 0.49
CAPN2-201ENST00000295006 TPM3P06753 285 aa18.1■□□□□ 0.49
CAPN2-201ENST00000295006 MTERF4Q7Z6M4 381 aaKnown RBP18.1■□□□□ 0.49
CAPN2-201ENST00000295006 TM6SF1Q9BZW5 370 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms