RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Wdr93Q402B2 695 aa21.85■■□□□ 1.09
Trim47-202ENSMUST00000106441 Ppm1mQ8BU27 406 aa21.85■■□□□ 1.09
Trim47-202ENSMUST00000106441 Nlrp3Q8R4B8 1033 aa21.85■■□□□ 1.09
Trim47-202ENSMUST00000106441 SrrtQ99MR6 875 aaKnown RBP21.85■■□□□ 1.09
Trim47-202ENSMUST00000106441 MypnQ5DTJ9 1315 aa21.85■■□□□ 1.09
Trim47-202ENSMUST00000106441 Zap70P43404 618 aa21.84■■□□□ 1.09
Trim47-202ENSMUST00000106441 Rbm27Q5SFM8 1060 aaKnown RBP21.84■■□□□ 1.09
Trim47-202ENSMUST00000106441 HellsQ60848 821 aa21.84■■□□□ 1.09
Trim47-202ENSMUST00000106441 Esco1Q69Z69 843 aa21.84■■□□□ 1.09
Trim47-202ENSMUST00000106441 Rnf214Q8BFU3 668 aaKnown RBP21.84■■□□□ 1.09
Trim47-202ENSMUST00000106441 RtcbQ99LF4 505 aaKnown RBP21.84■■□□□ 1.09
Trim47-202ENSMUST00000106441 Gjb2Q00977 226 aa21.83■■□□□ 1.09
Trim47-202ENSMUST00000106441 Ddx58Q6Q899 926 aa21.83■■□□□ 1.09
Trim47-202ENSMUST00000106441 Chmp4cQ9D7F7 232 aa21.83■■□□□ 1.09
Trim47-202ENSMUST00000106441 Mlh1Q9JK91 760 aa21.83■■□□□ 1.09
Trim47-202ENSMUST00000106441 Nphp3Q7TNH6 1325 aa21.83■■□□□ 1.09
Trim47-202ENSMUST00000106441 1700006A11RikB9EHI3 544 aa21.82■■□□□ 1.08
Trim47-202ENSMUST00000106441 Casc1Q6TDU8 730 aa21.82■■□□□ 1.08
Trim47-202ENSMUST00000106441 Cchcr1Q8K2I2 770 aa21.82■■□□□ 1.08
Trim47-202ENSMUST00000106441 Ssc5dQ8BV57 1371 aa21.82■■□□□ 1.08
Trim47-202ENSMUST00000106441 Cfdp1O88271 295 aaKnown RBP21.82■■□□□ 1.08
Trim47-202ENSMUST00000106441 Fam198bQ3UPI1 517 aa21.82■■□□□ 1.08
Trim47-202ENSMUST00000106441 Slc4a10Q5DTL9 1118 aa21.82■■□□□ 1.08
Trim47-202ENSMUST00000106441 Anp32cQ64G17 123 aa21.82■■□□□ 1.08
Trim47-202ENSMUST00000106441 Rps6ka5Q8C050 863 aa21.82■■□□□ 1.08
Trim47-202ENSMUST00000106441 HmcesQ8R1M0 353 aaKnown RBP21.82■■□□□ 1.08
Trim47-202ENSMUST00000106441 Tceal9Q9DD24 104 aa21.82■■□□□ 1.08
Trim47-202ENSMUST00000106441 MeiocA2AG06 965 aa21.81■■□□□ 1.08
Trim47-202ENSMUST00000106441 Atp1b3P97370 278 aa21.81■■□□□ 1.08
Trim47-202ENSMUST00000106441 Fkbp5Q64378 456 aa21.81■■□□□ 1.08
Trim47-202ENSMUST00000106441 Slf2Q6P9P0 1278 aa21.81■■□□□ 1.08
Trim47-202ENSMUST00000106441 E4f1Q8CCE9 783 aa21.81■■□□□ 1.08
Trim47-202ENSMUST00000106441 Add2Q9QYB8 725 aa21.81■■□□□ 1.08
Trim47-202ENSMUST00000106441 Trip6Q9Z1Y4 480 aa21.81■■□□□ 1.08
Trim47-202ENSMUST00000106441 Ppfia1B2RXQ2 1266 aa21.8■■□□□ 1.08
Trim47-202ENSMUST00000106441 Pank2Q3U4S0 443 aa21.8■■□□□ 1.08
Trim47-202ENSMUST00000106441 Ankib1Q6ZPS6 1085 aa21.8■■□□□ 1.08
Trim47-202ENSMUST00000106441 Top1mtQ8R4U6 593 aa21.8■■□□□ 1.08
Trim47-202ENSMUST00000106441 Med4Q9CQA5 270 aa21.8■■□□□ 1.08
Trim47-202ENSMUST00000106441 Ank1Q02357 1862 aa21.8■■□□□ 1.08
Trim47-202ENSMUST00000106441 Ubr3Q5U430 1889 aa21.8■■□□□ 1.08
Trim47-202ENSMUST00000106441 Wdr78E9PYY5 807 aa21.8■■□□□ 1.08
Trim47-202ENSMUST00000106441 Map3k13Q1HKZ5 959 aa21.8■■□□□ 1.08
Trim47-202ENSMUST00000106441 Adam1aQ60813 791 aa21.8■■□□□ 1.08
Trim47-202ENSMUST00000106441 Tbc1d31Q6NXY1 996 aa21.8■■□□□ 1.08
Trim47-202ENSMUST00000106441 Smc3Q9CW03 1217 aaKnown RBP21.8■■□□□ 1.08
Trim47-202ENSMUST00000106441 Stx6Q9JKK1 255 aa21.8■■□□□ 1.08
Trim47-202ENSMUST00000106441 Eif3aP23116 1344 aaKnown RBP21.79■■□□□ 1.08
Trim47-202ENSMUST00000106441 Ube2hP62257 183 aa21.79■■□□□ 1.08
Trim47-202ENSMUST00000106441 Brf1Q8CFK2 676 aa21.79■■□□□ 1.08
Trim47-202ENSMUST00000106441 Chd1lQ9CXF7 900 aa21.79■■□□□ 1.08
Trim47-202ENSMUST00000106441 Rufy3Q9D394 469 aa21.78■■□□□ 1.08
Trim47-202ENSMUST00000106441 Stk3Q9JI10 497 aa21.78■■□□□ 1.08
Trim47-202ENSMUST00000106441 Tlr7P58681 1050 aa21.78■■□□□ 1.08
Trim47-202ENSMUST00000106441 Olfml1Q8BSH2 233 aa21.78■■□□□ 1.08
Trim47-202ENSMUST00000106441 Lmbr1lQ9D1E5 489 aa21.78■■□□□ 1.08
Trim47-202ENSMUST00000106441 Syt1P46096 421 aa21.77■■□□□ 1.08
Trim47-202ENSMUST00000106441 AbraQ8BUZ1 375 aa21.77■■□□□ 1.08
Trim47-202ENSMUST00000106441 Ltb4r2Q9JJL9 360 aa21.77■■□□□ 1.08
Trim47-202ENSMUST00000106441 Dpf1Q9QX66 387 aa21.77■■□□□ 1.08
Trim47-202ENSMUST00000106441 Zfyve9A2A8R0 1397 aa21.77■■□□□ 1.08
Trim47-202ENSMUST00000106441 Abcc4E9Q236 1325 aa21.77■■□□□ 1.08
Trim47-202ENSMUST00000106441 AK157302I3ITR1 129 aa21.77■■□□□ 1.07
Trim47-202ENSMUST00000106441 NppbP40753 121 aa21.77■■□□□ 1.07
Trim47-202ENSMUST00000106441 Isca1Q9D924 129 aa21.77■■□□□ 1.07
Trim47-202ENSMUST00000106441 Col11a2Q64739 1736 aa21.76■■□□□ 1.07
Trim47-202ENSMUST00000106441 Mybbp1aQ7TPV4 1344 aaKnown RBP21.76■■□□□ 1.07
Trim47-202ENSMUST00000106441 Myd88P22366 296 aa21.76■■□□□ 1.07
Trim47-202ENSMUST00000106441 Soga3Q6NZL0 945 aa21.76■■□□□ 1.07
Trim47-202ENSMUST00000106441 Pof1bQ8K4L4 587 aa21.76■■□□□ 1.07
Trim47-202ENSMUST00000106441 Arap2Q8BZ05 1703 aa21.76■■□□□ 1.07
Trim47-202ENSMUST00000106441 Bms1Q6PGF5 1284 aaKnown RBP21.75■■□□□ 1.07
Trim47-202ENSMUST00000106441 Mrc1Q61830 1456 aa21.75■■□□□ 1.07
Trim47-202ENSMUST00000106441 Gm45140A0A0N4SUM8 220 aa21.75■■□□□ 1.07
Trim47-202ENSMUST00000106441 Kif3aP28741 701 aa21.75■■□□□ 1.07
Trim47-202ENSMUST00000106441 Tti2Q8BGV4 512 aa21.75■■□□□ 1.07
Trim47-202ENSMUST00000106441 Srp68Q8BMA6 625 aaKnown RBP21.75■■□□□ 1.07
Trim47-202ENSMUST00000106441 Ccdc178Q8CDV0 866 aa21.75■■□□□ 1.07
Trim47-202ENSMUST00000106441 Cwc25Q9DBF7 416 aa21.75■■□□□ 1.07
Trim47-202ENSMUST00000106441 Zfp804bA0A0G2JGH6 1343 aa21.75■■□□□ 1.07
Trim47-202ENSMUST00000106441 Spata31d1bE9QA57 1361 aa21.74■■□□□ 1.07
Trim47-202ENSMUST00000106441 Grm8P47743 908 aa21.74■■□□□ 1.07
Trim47-202ENSMUST00000106441 Jdp2P97875 163 aa21.74■■□□□ 1.07
Trim47-202ENSMUST00000106441 Snai1Q02085 264 aa21.74■■□□□ 1.07
Trim47-202ENSMUST00000106441 Ifit1bl2Q3U687 466 aa21.74■■□□□ 1.07
Trim47-202ENSMUST00000106441 Amhr2Q8K592 568 aa21.74■■□□□ 1.07
Trim47-202ENSMUST00000106441 OscarQ8VBT3 265 aa21.74■■□□□ 1.07
Trim47-202ENSMUST00000106441 NgdnQ9DB96 315 aaKnown RBP21.74■■□□□ 1.07
Trim47-202ENSMUST00000106441 Plch1Q4KWH5 1682 aa21.74■■□□□ 1.07
Trim47-202ENSMUST00000106441 NmiO35309 314 aa21.74■■□□□ 1.07
Trim47-202ENSMUST00000106441 Fkbp1aP26883 108 aaKnown RBP21.74■■□□□ 1.07
Trim47-202ENSMUST00000106441 Taf5lQ91WQ5 589 aa21.74■■□□□ 1.07
Trim47-202ENSMUST00000106441 Stard3nlQ9DCI3 235 aa21.74■■□□□ 1.07
Trim47-202ENSMUST00000106441 Ifit2Q64112 472 aa21.73■■□□□ 1.07
Trim47-202ENSMUST00000106441 Ddx11Q6AXC6 880 aa21.73■■□□□ 1.07
Trim47-202ENSMUST00000106441 Ripor2Q80U16 1078 aa21.73■■□□□ 1.07
Trim47-202ENSMUST00000106441 SowahdQ8BY98 327 aa21.73■■□□□ 1.07
Trim47-202ENSMUST00000106441 Q9D9S1 216 aa21.73■■□□□ 1.07
Trim47-202ENSMUST00000106441 Ehd4Q9EQP2 541 aa21.73■■□□□ 1.07
Trim47-202ENSMUST00000106441 Sumf1Q8R0F3 372 aa21.72■■□□□ 1.07
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms