RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 PdcQ9QW08 244 aa17.86■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Col18a1P39061 1774 aa17.86■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Pdia4P08003 638 aaKnown RBP17.85■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Sult6b1P0CC03 303 aa17.85■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Trim52Q8CDV4 233 aa17.85■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Irgm2A0A140LIF8 407 aa17.85■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Zpr1Q62384 459 aa17.85■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Ppp4r3aQ6P2K6 820 aa17.85■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Pus3Q9JI38 481 aa17.85■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Prl3d3A0A0M6L0J6 224 aa17.85■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 NpeppsQ11011 920 aa17.85■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Nlrp1aQ2LKU9 1182 aa17.85■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Snx13Q6PHS6 957 aa17.85■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Iffo2Q8R2V2 512 aa17.85■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 ZwintQ9CQU5 252 aa17.85■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Stat1P42225 749 aa17.84■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Bach1P97302 739 aa17.84■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Mb21d2Q8C525 428 aa17.84■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Rassf8Q8CJ96 419 aa17.84■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Atp8b3Q6UQ17 1335 aa17.84■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Timm10P62073 90 aa17.83■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Golim4Q8BXA1 655 aa17.83■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Bmp2kQ91Z96 1138 aa17.83■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Col4a1P02463 1669 aa17.83■□□□□ 0.45
Nkx3-1-201ENSMUST00000022646 Abca15E9PWH4 1668 aa17.83■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Gm21680A0A0G2JGR8 267 aa17.83■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Plekhd1B2RPU2 505 aa17.83■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Ppp1r10Q80W00 888 aaKnown RBP17.83■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Tubb6Q922F4 447 aa17.83■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Chmp3Q9CQ10 224 aa17.83■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Sh3bp5Q9Z131 463 aa17.83■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Atg9aQ68FE2 551 aa17.83■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Rbm10Q99KG3 930 aaKnown RBP17.83■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Ric1Q69ZJ7 1422 aa17.83■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 NfkbibQ60778 359 aa17.82■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Cwc25Q9DBF7 416 aa17.82■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Stard3nlQ9DCI3 235 aa17.82■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Ripk4Q9ERK0 786 aa17.82■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Prl7a2O54831 253 aa17.82■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Ccdc129Q14B48 1034 aa17.82■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Ints5Q8CHT3 1018 aa17.82■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Tmc2Q8R4P4 888 aa17.82■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Erc1Q99MI1 1120 aa17.82■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Txnrd1Q9JMH6 613 aa17.82■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Wdr33Q8K4P0 1330 aaKnown RBP17.81■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Usp25P57080 1055 aa17.81■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Hvcn1Q3U2S8 269 aa17.81■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Usp44Q8C2S0 711 aa17.81■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Plcd1Q8R3B1 756 aa17.81■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Add3Q9QYB5 706 aaKnown RBP17.81■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Gse1Q3U3C9 1213 aa17.81■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Mx2Q9WVP9 655 aa17.81■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Ubash3aQ3V3E1 624 aa17.81■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Krt85Q9Z2T6 507 aa17.81■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Ano1Q8BHY3 960 aa17.8■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Ccdc158Q8CDI6 1109 aa17.8■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Zfp142G5E869 1843 aa17.8■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Myd88P22366 296 aa17.8■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Lmbrd2Q8C561 694 aa17.8■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Ltb4r2Q9JJL9 360 aa17.8■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Mmel1Q9JLI3 765 aa17.8■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 AK157302I3ITR1 129 aa17.79■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Cyp2d10P24456 504 aa17.79■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Ptcd1Q8C2E4 695 aaKnown RBP17.79■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Isca1Q9D924 129 aa17.79■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 AtrnQ9WU60 1428 aa17.79■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Lnx1O70263 728 aa17.79■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Polr3gQ6NXY9 223 aa17.79■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Srgap1Q91Z69 1062 aa17.79■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Fbxl16A2RT62 479 aa17.79■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Ccdc162pQ0VG85 912 aa17.79■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Ltv1Q6NSQ7 470 aaKnown RBP17.79■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Amigo3Q8C2S7 508 aa17.79■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Fam84aQ9D650 292 aa17.79■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Rapgef3Q8VCC8 918 aa17.78■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 FosbP13346 338 aa17.78■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 EzrP26040 586 aaKnown RBP17.78■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 TnmdQ9EP64 317 aa17.78■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Ank1Q02357 1862 aa17.78■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Prl3d2F6R3P9 224 aa17.77■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 ZyxQ62523 564 aa17.77■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Tbc1d31Q6NXY1 996 aa17.77■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Fam102bQ8BQS4 339 aa17.77■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Smc4Q8CG47 1286 aa17.77■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Zkscan7E9PVW1 718 aa17.77■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Lins1Q3U1D0 764 aa17.77■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 R3hcc1Q8BSI6 488 aa17.77■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Bcl9lQ67FY2 1494 aa17.77■□□□□ 0.44
Nkx3-1-201ENSMUST00000022646 Tyro3P55144 880 aa17.77■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Col22a1E9Q7P1 1613 aa17.76■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Sos2Q02384 1333 aa17.76■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Brpf3B2KF05 1204 aaKnown RBP17.76■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Eya2O08575 532 aa17.76■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Zfp317Q8C0Q5 607 aa17.76■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Ttc19Q8CC21 365 aa17.76■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Krt25Q8VCW2 446 aa17.76■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Bicd2Q921C5 820 aa17.76■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Nfe2l3Q9WTM4 660 aa17.76■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Ppfia3P60469 1194 aa17.76■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Ankib1Q6ZPS6 1085 aa17.76■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 61.7 ms