RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A GIR2Q03768 265 aaPredicted RBP17.07■□□□□ 0.32
TRN1tP(UGG)A VMA1P17255 1071 aaKnown RBP17.06■□□□□ 0.32
TRN1tP(UGG)A POT1P27796 417 aaKnown RBP RIP-Chip data17.06■□□□□ 0.32not detected
TRN1tP(UGG)A SHE10P53075 577 aa17.06■□□□□ 0.32
TRN1tP(UGG)A FMP30Q02883 468 aa17.06■□□□□ 0.32
TRN1tP(UGG)A TRS130Q03660 1102 aa17.06■□□□□ 0.32
TRN1tP(UGG)A UTP14Q04500 899 aaKnown RBP17.06■□□□□ 0.32
TRN1tP(UGG)A DON1Q05610 365 aa17.06■□□□□ 0.32
TRN1tP(UGG)A SWI6P09959 803 aa17.05■□□□□ 0.32
TRN1tP(UGG)A RPS6AP0CX37 236 aaKnown RBP17.05■□□□□ 0.32
TRN1tP(UGG)A RPS6BP0CX38 236 aaPredicted RBP17.05■□□□□ 0.32
TRN1tP(UGG)A SEC65P29478 273 aa17.05■□□□□ 0.32
TRN1tP(UGG)A DRE2P36152 348 aa17.05■□□□□ 0.32
TRN1tP(UGG)A SCD6P45978 349 aaKnown RBP RIP-Chip data17.05■□□□□ 0.32not detected
TRN1tP(UGG)A ASN1P49089 572 aaKnown RBP17.05■□□□□ 0.32
TRN1tP(UGG)A ECM7Q06200 448 aa17.05■□□□□ 0.32
TRN1tP(UGG)A RLP24Q07915 199 aaKnown RBP17.05■□□□□ 0.32
TRN1tP(UGG)A FAL1Q12099 399 aaKnown RBP17.05■□□□□ 0.32
TRN1tP(UGG)A ZPS1Q12512 249 aa17.05■□□□□ 0.32
TRN1tP(UGG)A APL1P27351 700 aa17.04■□□□□ 0.32
TRN1tP(UGG)A SHM1P37292 490 aaPredicted RBP17.04■□□□□ 0.32
TRN1tP(UGG)A HSH155P49955 971 aaKnown RBP17.04■□□□□ 0.32
TRN1tP(UGG)A YNL115CP53925 644 aa17.04■□□□□ 0.32
TRN1tP(UGG)A MUK1Q02866 612 aa17.04■□□□□ 0.32
TRN1tP(UGG)A LDB19Q12502 818 aa17.04■□□□□ 0.32
TRN1tP(UGG)A SKG6P32900 734 aaPredicted RBP17.03■□□□□ 0.32
TRN1tP(UGG)A MPE1P35728 441 aaKnown RBP17.03■□□□□ 0.32
TRN1tP(UGG)A NPP2P39997 493 aa17.03■□□□□ 0.32
TRN1tP(UGG)A FYV8P46949 817 aaKnown RBP17.03■□□□□ 0.32
TRN1tP(UGG)A SHS1Q07657 551 aa17.03■□□□□ 0.32
TRN1tP(UGG)A CWC2Q12046 339 aaPredicted RBP17.03■□□□□ 0.32
TRN1tP(UGG)A TAO3P40468 2376 aa17.03■□□□□ 0.32
TRN1tP(UGG)A PIN4P34217 668 aaKnown RBP RIP-Chip data17.02■□□□□ 0.32not detected
TRN1tP(UGG)A FIR1P40020 876 aa17.02■□□□□ 0.32
TRN1tP(UGG)A SSB1P11484 613 aaKnown RBP17.01■□□□□ 0.31
TRN1tP(UGG)A ADE2P21264 571 aaKnown RBP17.01■□□□□ 0.31
TRN1tP(UGG)A SPO11P23179 398 aa17.01■□□□□ 0.31
TRN1tP(UGG)A MCM2P29469 868 aa17.01■□□□□ 0.31
TRN1tP(UGG)A SSB2P40150 613 aaKnown RBP17.01■□□□□ 0.31
TRN1tP(UGG)A YFL040WP43562 540 aa17.01■□□□□ 0.31
TRN1tP(UGG)A VPS75P53853 264 aa17.01■□□□□ 0.31
TRN1tP(UGG)A FUB1P25659 250 aa17■□□□□ 0.31
TRN1tP(UGG)A MMS4P38257 691 aa17■□□□□ 0.31
TRN1tP(UGG)A COS5P47187 383 aa17■□□□□ 0.31
TRN1tP(UGG)A UBR2Q07963 1872 aa16.99■□□□□ 0.31
TRN1tP(UGG)A COX4P04037 155 aa16.99■□□□□ 0.31
TRN1tP(UGG)A ADE4P04046 510 aaKnown RBP16.99■□□□□ 0.31
TRN1tP(UGG)A GLN3P18494 730 aa16.99■□□□□ 0.31
TRN1tP(UGG)A YKL023WP36103 277 aaKnown RBP16.99■□□□□ 0.31
TRN1tP(UGG)A MRX3P38172 270 aa16.99■□□□□ 0.31
TRN1tP(UGG)A EFM2P38347 419 aa16.99■□□□□ 0.31
TRN1tP(UGG)A RTT107P38850 1070 aa16.99■□□□□ 0.31
TRN1tP(UGG)A LAM5P43560 674 aa16.99■□□□□ 0.31
TRN1tP(UGG)A DOT1Q04089 582 aaKnown RBP16.99■□□□□ 0.31
TRN1tP(UGG)A SLX4Q12098 748 aa16.99■□□□□ 0.31
TRN1tP(UGG)A LAA1P39526 2014 aa16.98■□□□□ 0.31
TRN1tP(UGG)A TOM70P07213 617 aaKnown RBP16.98■□□□□ 0.31
TRN1tP(UGG)A RPL4AP10664 362 aaKnown RBP16.98■□□□□ 0.31
TRN1tP(UGG)A PHO13P19881 312 aa16.98■□□□□ 0.31
TRN1tP(UGG)A FIG4P42837 879 aa16.98■□□□□ 0.31
TRN1tP(UGG)A GCV2P49095 1034 aa16.98■□□□□ 0.31
TRN1tP(UGG)A RPL4BP49626 362 aaKnown RBP16.98■□□□□ 0.31
TRN1tP(UGG)A YNL134CP53912 376 aaKnown RBP16.98■□□□□ 0.31
TRN1tP(UGG)A GRS1P38088 690 aaKnown RBP16.97■□□□□ 0.31
TRN1tP(UGG)A BRL1P38770 471 aa16.97■□□□□ 0.31
TRN1tP(UGG)A HFM1P51979 1187 aa16.97■□□□□ 0.31
TRN1tP(UGG)A PCD1Q12524 340 aa16.97■□□□□ 0.31
TRN1tP(UGG)A XRS2P33301 854 aa16.96■□□□□ 0.31
TRN1tP(UGG)A BUD2P33314 1104 aa16.96■□□□□ 0.31
TRN1tP(UGG)A YLR297WQ05899 129 aa16.96■□□□□ 0.31
TRN1tP(UGG)A WHI3P34761 661 aaKnown RBP16.95■□□□□ 0.3
TRN1tP(UGG)A LEO1P38439 464 aa16.95■□□□□ 0.3
TRN1tP(UGG)A FOL2P51601 243 aaKnown RBP16.95■□□□□ 0.3
TRN1tP(UGG)A CWC21Q03375 135 aaKnown RBP16.95■□□□□ 0.3
TRN1tP(UGG)A CEF1Q03654 590 aaPredicted RBP16.95■□□□□ 0.3
TRN1tP(UGG)A YLR287CQ05881 355 aa16.95■□□□□ 0.3
TRN1tP(UGG)A UBX7P38349 436 aa16.94■□□□□ 0.3
TRN1tP(UGG)A YAP1801P38856 637 aa16.94■□□□□ 0.3
TRN1tP(UGG)A VFA1P40080 203 aa16.94■□□□□ 0.3
TRN1tP(UGG)A TBF1Q02457 562 aa16.94■□□□□ 0.3
TRN1tP(UGG)A CSR1Q06705 408 aaKnown RBP16.94■□□□□ 0.3
TRN1tP(UGG)A RRP6Q12149 733 aaKnown RBP16.94■□□□□ 0.3
TRN1tP(UGG)A RPT1P33299 467 aaKnown RBP16.93■□□□□ 0.3
TRN1tP(UGG)A TRM2P33753 639 aa16.93■□□□□ 0.3
TRN1tP(UGG)A MAC1P35192 417 aa16.93■□□□□ 0.3
TRN1tP(UGG)A STR2P47164 639 aa16.93■□□□□ 0.3
TRN1tP(UGG)A ALT2P52892 507 aa16.93■□□□□ 0.3
TRN1tP(UGG)A PRR1P28708 518 aa16.92■□□□□ 0.3
TRN1tP(UGG)A SWI3P32591 825 aa16.92■□□□□ 0.3
TRN1tP(UGG)A NIP100P33420 868 aa16.92■□□□□ 0.3
TRN1tP(UGG)A PXL1P36166 706 aa16.92■□□□□ 0.3
TRN1tP(UGG)A KIC1P38692 1080 aa16.92■□□□□ 0.3
TRN1tP(UGG)A FTR1P40088 404 aa16.92■□□□□ 0.3
TRN1tP(UGG)A ALG11P53954 548 aaKnown RBP16.92■□□□□ 0.3
TRN1tP(UGG)A UME1Q03010 460 aa16.92■□□□□ 0.3
TRN1tP(UGG)A RGA2Q06407 1009 aa16.92■□□□□ 0.3
TRN1tP(UGG)A YDL206WQ12424 762 aa16.92■□□□□ 0.3
TRN1tP(UGG)A IME1P21190 360 aa16.91■□□□□ 0.3
TRN1tP(UGG)A CAD1P24813 409 aaKnown RBP16.91■□□□□ 0.3
TRN1tP(UGG)A CBF2P32504 956 aa16.91■□□□□ 0.3
Retrieved 100 of 5,963 RNA–protein pairs in 276.8 ms