RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeastyeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT3YPR001W NCR1Q12200 1170 aa7.43□□□□□ -1.22
CIT3YPR001W HTS1P07263 546 aaKnown RBP7.42□□□□□ -1.22
CIT3YPR001W FUR1P18562 216 aaKnown RBP7.42□□□□□ -1.22
CIT3YPR001W ERT1P38140 529 aa7.42□□□□□ -1.22
CIT3YPR001W ALG3P38179 458 aa7.42□□□□□ -1.22
CIT3YPR001W ATG14P38270 344 aa7.42□□□□□ -1.22
CIT3YPR001W UBS1P38290 277 aa7.42□□□□□ -1.22
CIT3YPR001W NOP16P40007 231 aaKnown RBP7.42□□□□□ -1.22
CIT3YPR001W YER156CP40093 338 aaKnown RBP7.42□□□□□ -1.22
CIT3YPR001W HOS2P53096 452 aaPredicted RBP7.42□□□□□ -1.22
CIT3YPR001W TEP1P53916 434 aa7.42□□□□□ -1.22
CIT3YPR001W SRP1Q02821 542 aaKnown RBP7.42□□□□□ -1.22
CIT3YPR001W SGD1Q06132 899 aa7.42□□□□□ -1.22
CIT3YPR001W RSC2Q06488 889 aa7.42□□□□□ -1.22
CIT3YPR001W BRE4Q07660 1125 aa7.42□□□□□ -1.22
CIT3YPR001W RGP1P16664 663 aa7.41□□□□□ -1.22
CIT3YPR001W PGS1P25578 521 aa7.41□□□□□ -1.22
CIT3YPR001W KRR1P25586 316 aaPredicted RBP7.41□□□□□ -1.22
CIT3YPR001W PAH1P32567 862 aa7.41□□□□□ -1.22
CIT3YPR001W AFR1P33304 620 aa7.41□□□□□ -1.22
CIT3YPR001W SER1P33330 395 aaKnown RBP7.41□□□□□ -1.22
CIT3YPR001W NCL1P38205 684 aaKnown RBP7.41□□□□□ -1.22
CIT3YPR001W KAP123P40069 1113 aaKnown RBP7.41□□□□□ -1.22
CIT3YPR001W UPF3P48412 387 aaKnown RBP7.41□□□□□ -1.22
CIT3YPR001W GPI8P49018 411 aa7.41□□□□□ -1.22
CIT3YPR001W RBG2P53295 368 aaKnown RBP7.41□□□□□ -1.22
CIT3YPR001W YNR040WP53736 256 aa7.41□□□□□ -1.22
CIT3YPR001W PTA1Q01329 785 aaPredicted RBP7.41□□□□□ -1.22
CIT3YPR001W NHX1Q04121 633 aa7.41□□□□□ -1.22
CIT3YPR001W GSF2Q04697 403 aaKnown RBP7.41□□□□□ -1.22
CIT3YPR001W YLR287CQ05881 355 aa7.41□□□□□ -1.22
CIT3YPR001W GYP1Q08484 637 aa7.41□□□□□ -1.22
CIT3YPR001W HSH49Q99181 213 aaPredicted RBP7.41□□□□□ -1.22
CIT3YPR001W BI4P03879 638 aa7.4□□□□□ -1.22
CIT3YPR001W HCA4P20448 770 aaKnown RBP7.4□□□□□ -1.22
CIT3YPR001W MUD2P36084 527 aaKnown RBP7.4□□□□□ -1.22
CIT3YPR001W PNT1P38969 423 aa7.4□□□□□ -1.22
CIT3YPR001W SLS1P42900 643 aa7.4□□□□□ -1.22
CIT3YPR001W UTP22P53254 1237 aaPredicted RBP7.4□□□□□ -1.22
CIT3YPR001W NSE5Q03718 556 aa7.4□□□□□ -1.22
CIT3YPR001W HLR1Q04429 423 aa7.4□□□□□ -1.22
CIT3YPR001W TDA9Q04545 1251 aa7.4□□□□□ -1.22
CIT3YPR001W TY1A-DR3Q12441 440 aa7.4□□□□□ -1.22
CIT3YPR001W RPS21AP0C0V8 87 aaKnown RBP7.39□□□□□ -1.23
CIT3YPR001W SPO16P17122 198 aa7.39□□□□□ -1.23
CIT3YPR001W TPM1P17536 199 aaKnown RBP7.39□□□□□ -1.23
CIT3YPR001W AAC3P18238 307 aa7.39□□□□□ -1.23
CIT3YPR001W HOP1P20050 605 aa7.39□□□□□ -1.23
CIT3YPR001W RAD16P31244 790 aa7.39□□□□□ -1.23
CIT3YPR001W DHR2P36009 735 aaPredicted RBP7.39□□□□□ -1.23
CIT3YPR001W SAP30P38429 201 aa7.39□□□□□ -1.23
CIT3YPR001W HXT6P39003 570 aaKnown RBP7.39□□□□□ -1.23
CIT3YPR001W HXT7P39004 570 aa7.39□□□□□ -1.23
CIT3YPR001W CCM1P48237 864 aaPredicted RBP7.39□□□□□ -1.23
CIT3YPR001W ASK10P48361 1146 aa7.39□□□□□ -1.23
CIT3YPR001W MOT3P54785 490 aaKnown RBP7.39□□□□□ -1.23
CIT3YPR001W YHM2Q04013 314 aa7.39□□□□□ -1.23
CIT3YPR001W YDR514CQ04408 483 aa7.39□□□□□ -1.23
CIT3YPR001W HFI1Q12060 488 aa7.39□□□□□ -1.23
CIT3YPR001W DPH6Q12429 685 aa7.39□□□□□ -1.23
CIT3YPR001W KCS1Q12494 1050 aa7.39□□□□□ -1.23
CIT3YPR001W PER1P25625 357 aa7.38□□□□□ -1.23
CIT3YPR001W CMK1P27466 446 aaKnown RBP7.38□□□□□ -1.23
CIT3YPR001W CCR4P31384 837 aaKnown RBP7.38□□□□□ -1.23
CIT3YPR001W CDC12P32468 407 aaKnown RBP7.38□□□□□ -1.23
CIT3YPR001W SLA1P32790 1244 aa7.38□□□□□ -1.23
CIT3YPR001W XRS2P33301 854 aa7.38□□□□□ -1.23
CIT3YPR001W SHM2P37291 469 aaKnown RBP7.38□□□□□ -1.23
CIT3YPR001W RPN10P38886 268 aaKnown RBP7.38□□□□□ -1.23
CIT3YPR001W VPS53P47061 822 aa7.38□□□□□ -1.23
CIT3YPR001W BNA2P47125 453 aa7.38□□□□□ -1.23
CIT3YPR001W YJR124CP47159 448 aa7.38□□□□□ -1.23
CIT3YPR001W ZIP2P53061 704 aa7.38□□□□□ -1.23
CIT3YPR001W BTN2P53286 410 aa7.38□□□□□ -1.23
CIT3YPR001W MRPL19P53875 158 aa7.38□□□□□ -1.23
CIT3YPR001W ARA2Q04212 335 aa7.38□□□□□ -1.23
CIT3YPR001W YKU80Q04437 629 aa7.38□□□□□ -1.23
CIT3YPR001W RRG1Q12167 365 aaPredicted RBP7.38□□□□□ -1.23
CIT3YPR001W TAH18Q12181 623 aa7.38□□□□□ -1.23
CIT3YPR001W PTC5Q12511 572 aa7.38□□□□□ -1.23
CIT3YPR001W APM4Q99186 491 aa7.38□□□□□ -1.23
CIT3YPR001W PGM2P37012 569 aaKnown RBP7.37□□□□□ -1.23
CIT3YPR001W MEP1P40260 492 aa7.37□□□□□ -1.23
CIT3YPR001W NIT3P49954 291 aa7.37□□□□□ -1.23
CIT3YPR001W ATP22P50273 684 aaPredicted RBP7.37□□□□□ -1.23
CIT3YPR001W TAD1P53065 400 aa7.37□□□□□ -1.23
CIT3YPR001W CTF4Q01454 927 aa7.37□□□□□ -1.23
CIT3YPR001W TIM50Q02776 476 aa7.37□□□□□ -1.23
CIT3YPR001W PRP3Q03338 469 aaPredicted RBP7.37□□□□□ -1.23
CIT3YPR001W ENV7Q12003 364 aa7.37□□□□□ -1.23
CIT3YPR001W NPP1P25353 742 aa7.36□□□□□ -1.23
CIT3YPR001W SLC1P33333 303 aa7.36□□□□□ -1.23
CIT3YPR001W YKL100CP34248 587 aa7.36□□□□□ -1.23
CIT3YPR001W ARL1P38116 183 aaKnown RBP7.36□□□□□ -1.23
CIT3YPR001W PPE1P38796 400 aa7.36□□□□□ -1.23
CIT3YPR001W INP51P40559 946 aaKnown RBP7.36□□□□□ -1.23
CIT3YPR001W FET4P40988 552 aa7.36□□□□□ -1.23
CIT3YPR001W SMK1P41808 388 aa7.36□□□□□ -1.23
CIT3YPR001W RNR4P49723 345 aaKnown RBP7.36□□□□□ -1.23
CIT3YPR001W YML6P51998 286 aa7.36□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 45.5 ms