RNA–Protein interactions for RNA: YPL112C

PEX25, Transcript of Peripheral peroxisomal membrane peroxin, yeast

Gene PEX25, Length 1,185 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX25	YPL112C	HYR1	P40581	163 aa	Known RBP	11.65	□□□□□ -0.54
PEX25	YPL112C	ORC5	P50874	479 aa		11.65	□□□□□ -0.54
PEX25	YPL112C	YPL216W	Q08964	1102 aa		11.65	□□□□□ -0.54
PEX25	YPL112C	YLR422W	Q06409	1932 aa		11.64	□□□□□ -0.55
PEX25	YPL112C	SAC6	P32599	642 aa	Known RBP	11.64	□□□□□ -0.55
PEX25	YPL112C	MRPL7	P36519	292 aa		11.64	□□□□□ -0.55
PEX25	YPL112C	BIM1	P40013	344 aa		11.64	□□□□□ -0.55
PEX25	YPL112C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	11.64	□□□□□ -0.55	not detected
PEX25	YPL112C	SHE10	P53075	577 aa		11.64	□□□□□ -0.55
PEX25	YPL112C	RPL4A	P10664	362 aa	Known RBP	11.63	□□□□□ -0.55
PEX25	YPL112C	TAF13	P11747	167 aa		11.63	□□□□□ -0.55
PEX25	YPL112C	POL3	P15436	1097 aa		11.63	□□□□□ -0.55
PEX25	YPL112C	YKT6	P36015	200 aa	Known RBP	11.63	□□□□□ -0.55
PEX25	YPL112C	MMS4	P38257	691 aa		11.63	□□□□□ -0.55
PEX25	YPL112C	FAF1	P40546	346 aa	Predicted RBP	11.63	□□□□□ -0.55
PEX25	YPL112C	HUL4	P40985	892 aa		11.63	□□□□□ -0.55
PEX25	YPL112C	CCM1	P48237	864 aa	Predicted RBP	11.63	□□□□□ -0.55
PEX25	YPL112C	ASN1	P49089	572 aa	Known RBP	11.63	□□□□□ -0.55
PEX25	YPL112C	RPL4B	P49626	362 aa	Known RBP	11.63	□□□□□ -0.55
PEX25	YPL112C	ALG11	P53954	548 aa	Known RBP	11.63	□□□□□ -0.55
PEX25	YPL112C	CWC21	Q03375	135 aa	Known RBP	11.63	□□□□□ -0.55
PEX25	YPL112C	VMS1	Q04311	632 aa	Known RBP	11.63	□□□□□ -0.55
PEX25	YPL112C	DDP1	Q99321	188 aa	Known RBP	11.63	□□□□□ -0.55
PEX25	YPL112C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	11.62	□□□□□ -0.55	RIP-Chip
PEX25	YPL112C	RSA4	P25382	515 aa	Known RBP	11.62	□□□□□ -0.55
PEX25	YPL112C	HEL1	P36113	551 aa		11.62	□□□□□ -0.55
PEX25	YPL112C	YHR131C	P38835	850 aa		11.62	□□□□□ -0.55
PEX25	YPL112C	YHR202W	P38887	602 aa		11.62	□□□□□ -0.55
PEX25	YPL112C	SNF7	P39929	240 aa	Known RBP	11.62	□□□□□ -0.55
PEX25	YPL112C	YER130C	P39959	443 aa		11.62	□□□□□ -0.55
PEX25	YPL112C	CCT5	P40413	562 aa	Known RBP	11.62	□□□□□ -0.55
PEX25	YPL112C	ISM1	P48526	1002 aa		11.62	□□□□□ -0.55
PEX25	YPL112C	YNL034W	P53963	612 aa		11.62	□□□□□ -0.55
PEX25	YPL112C	YNL018C	P53976	612 aa		11.62	□□□□□ -0.55
PEX25	YPL112C	CDC53	Q12018	815 aa	Known RBP	11.62	□□□□□ -0.55
PEX25	YPL112C	OSH2	Q12451	1283 aa		11.62	□□□□□ -0.55
PEX25	YPL112C	RPL22A	P05749	121 aa	Known RBP	11.61	□□□□□ -0.55
PEX25	YPL112C	KEX1	P09620	729 aa		11.61	□□□□□ -0.55
PEX25	YPL112C	MRF1	P30775	413 aa	Predicted RBP	11.61	□□□□□ -0.55
PEX25	YPL112C	ELM1	P32801	640 aa		11.61	□□□□□ -0.55
PEX25	YPL112C	VPS24	P36095	224 aa	Known RBP	11.61	□□□□□ -0.55
PEX25	YPL112C	CCL1	P37366	393 aa		11.61	□□□□□ -0.55
PEX25	YPL112C	XDJ1	P39102	459 aa		11.61	□□□□□ -0.55
PEX25	YPL112C	YER186C	P40101	306 aa		11.61	□□□□□ -0.55
PEX25	YPL112C	YFL052W	P43551	465 aa		11.61	□□□□□ -0.55
PEX25	YPL112C	YPT11	P48559	417 aa		11.61	□□□□□ -0.55
PEX25	YPL112C	VID30	P53076	958 aa		11.61	□□□□□ -0.55
PEX25	YPL112C	SPP1	Q03012	353 aa		11.61	□□□□□ -0.55
PEX25	YPL112C	SPO71	Q03868	1245 aa		11.61	□□□□□ -0.55
PEX25	YPL112C	DNL4	Q08387	944 aa	Predicted RBP	11.61	□□□□□ -0.55
PEX25	YPL112C	TCO89	Q08921	799 aa		11.61	□□□□□ -0.55
PEX25	YPL112C	PUS1	Q12211	544 aa	Known RBP	11.61	□□□□□ -0.55
PEX25	YPL112C	VMA1	P17255	1071 aa	Known RBP	11.6	□□□□□ -0.55
PEX25	YPL112C	TRK2	P28584	889 aa		11.6	□□□□□ -0.55
PEX25	YPL112C	RFS1	P38234	210 aa	Known RBP	11.6	□□□□□ -0.55
PEX25	YPL112C	TOS3	P43637	560 aa		11.6	□□□□□ -0.55
PEX25	YPL112C	UTP14	Q04500	899 aa	Known RBP	11.6	□□□□□ -0.55
PEX25	YPL112C	PKH2	Q12236	1081 aa	Known RBP	11.6	□□□□□ -0.55
PEX25	YPL112C	GPA1	P08539	472 aa		11.59	□□□□□ -0.55
PEX25	YPL112C	PRR1	P28708	518 aa		11.59	□□□□□ -0.55
PEX25	YPL112C	SEC21	P32074	935 aa	Known RBP	11.59	□□□□□ -0.55
PEX25	YPL112C	YKL091C	P33324	310 aa	Known RBP	11.59	□□□□□ -0.55
PEX25	YPL112C	TRM2	P33753	639 aa		11.59	□□□□□ -0.55
PEX25	YPL112C	ESC8	Q08119	714 aa		11.59	□□□□□ -0.55
PEX25	YPL112C	CIT2	P08679	460 aa		11.58	□□□□□ -0.56
PEX25	YPL112C	SYN8	P31377	255 aa		11.58	□□□□□ -0.56
PEX25	YPL112C	MUD1	P32605	298 aa	Known RBP	11.58	□□□□□ -0.56
PEX25	YPL112C	STB5	P38699	743 aa		11.58	□□□□□ -0.56
PEX25	YPL112C	NPP2	P39997	493 aa		11.58	□□□□□ -0.56
PEX25	YPL112C	ULI1	P43604	169 aa		11.58	□□□□□ -0.56
PEX25	YPL112C	HSH155	P49955	971 aa	Known RBP	11.58	□□□□□ -0.56
PEX25	YPL112C	LSC2	P53312	427 aa		11.58	□□□□□ -0.56
PEX25	YPL112C	RCR2	Q03446	210 aa	Known RBP	11.58	□□□□□ -0.56
PEX25	YPL112C	APC11	Q12157	165 aa		11.58	□□□□□ -0.56
PEX25	YPL112C	MED1	Q12321	566 aa		11.58	□□□□□ -0.56
PEX25	YPL112C	OM45	P16547	393 aa		11.57	□□□□□ -0.56
PEX25	YPL112C	BIO2	P32451	375 aa		11.57	□□□□□ -0.56
PEX25	YPL112C	APM2	P38700	605 aa		11.57	□□□□□ -0.56
PEX25	YPL112C	DJP1	P40564	432 aa		11.57	□□□□□ -0.56
PEX25	YPL112C	OYE3	P41816	400 aa	Predicted RBP	11.57	□□□□□ -0.56
PEX25	YPL112C	CIR1	P42940	261 aa		11.57	□□□□□ -0.56
PEX25	YPL112C	EEB1	Q02891	456 aa		11.57	□□□□□ -0.56
PEX25	YPL112C	MLH2	Q07980	695 aa		11.57	□□□□□ -0.56
PEX25	YPL112C	RAD54	P32863	898 aa		11.56	□□□□□ -0.56
PEX25	YPL112C	GCS1	P35197	352 aa		11.56	□□□□□ -0.56
PEX25	YPL112C	MNR2	P35724	969 aa		11.56	□□□□□ -0.56
PEX25	YPL112C	MGA2	P40578	1113 aa		11.56	□□□□□ -0.56
PEX25	YPL112C	LCB2	P40970	561 aa		11.56	□□□□□ -0.56
PEX25	YPL112C	STB4	P50104	949 aa		11.56	□□□□□ -0.56
PEX25	YPL112C	YGR130C	P53278	816 aa		11.56	□□□□□ -0.56
PEX25	YPL112C	DON1	Q05610	365 aa		11.56	□□□□□ -0.56
PEX25	YPL112C	SPP382	Q06411	708 aa	Predicted RBP	11.56	□□□□□ -0.56
PEX25	YPL112C	CHS2	P14180	963 aa		11.55	□□□□□ -0.56
PEX25	YPL112C	YIR016W	P40572	265 aa		11.55	□□□□□ -0.56
PEX25	YPL112C	LCD1	Q04377	747 aa		11.55	□□□□□ -0.56
PEX25	YPL112C	SDH5	Q08230	162 aa		11.55	□□□□□ -0.56
PEX25	YPL112C	YOL075C	Q08234	1294 aa		11.55	□□□□□ -0.56
PEX25	YPL112C	ETT1	Q08421	412 aa	Known RBP	11.55	□□□□□ -0.56
PEX25	YPL112C	AFT2	Q08957	416 aa		11.55	□□□□□ -0.56
PEX25	YPL112C	REC8	Q12188	680 aa		11.55	□□□□□ -0.56

Retrieved 100 of 5,963 RNA–protein pairs in 61.5 ms