RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W OAR1P35731 278 aa6.59□□□□□ -1.35
VPS28YPL065W RSP5P39940 809 aaKnown RBP6.59□□□□□ -1.35
VPS28YPL065W UPC2Q12151 913 aa6.59□□□□□ -1.35
VPS28YPL065W ARE1P25628 610 aa6.58□□□□□ -1.36
VPS28YPL065W AAR2P32357 355 aaPredicted RBP6.58□□□□□ -1.36
VPS28YPL065W PPG1P32838 368 aa6.58□□□□□ -1.36
VPS28YPL065W YBR238CP38330 731 aaKnown RBP6.58□□□□□ -1.36
VPS28YPL065W TSL1P38427 1098 aaKnown RBP6.58□□□□□ -1.36
VPS28YPL065W EAF1Q06337 982 aa6.58□□□□□ -1.36
VPS28YPL065W UBX5Q06682 500 aa6.58□□□□□ -1.36
VPS28YPL065W CIT1P00890 479 aa6.57□□□□□ -1.36
VPS28YPL065W HSP60P19882 572 aaKnown RBP6.57□□□□□ -1.36
VPS28YPL065W KTR4P38131 464 aa6.57□□□□□ -1.36
VPS28YPL065W NMD2P38798 1089 aaKnown RBP6.57□□□□□ -1.36
VPS28YPL065W ALR2P43553 858 aa6.57□□□□□ -1.36
VPS28YPL065W OSW7P43611 510 aa6.57□□□□□ -1.36
VPS28YPL065W ERP6P53198 216 aa6.57□□□□□ -1.36
VPS28YPL065W TIM23P32897 222 aa6.56□□□□□ -1.36
VPS28YPL065W YKE2P52553 114 aa6.56□□□□□ -1.36
VPS28YPL065W NOT3P06102 836 aaKnown RBP6.55□□□□□ -1.36
VPS28YPL065W MOH1P38191 138 aa6.55□□□□□ -1.36
VPS28YPL065W SIT1P39980 628 aa6.55□□□□□ -1.36
VPS28YPL065W NUP82P40368 713 aa6.55□□□□□ -1.36
VPS28YPL065W UBA2P52488 636 aa6.55□□□□□ -1.36
VPS28YPL065W UTP8P53276 713 aaKnown RBP6.55□□□□□ -1.36
VPS28YPL065W LAS17Q12446 633 aa6.55□□□□□ -1.36
VPS28YPL065W CAN1P04817 590 aa6.54□□□□□ -1.36
VPS28YPL065W PRP9P19736 530 aaKnown RBP6.54□□□□□ -1.36
VPS28YPL065W SUL1P38359 859 aa6.54□□□□□ -1.36
VPS28YPL065W ALG12P53730 551 aa6.54□□□□□ -1.36
VPS28YPL065W TRP4P07285 380 aaPredicted RBP6.53□□□□□ -1.36
VPS28YPL065W ERR1P0CX10 437 aa6.53□□□□□ -1.36
VPS28YPL065W ERR2P0CX11 437 aa6.53□□□□□ -1.36
VPS28YPL065W STE13P33894 931 aa6.53□□□□□ -1.36
VPS28YPL065W YRO2P38079 344 aa6.53□□□□□ -1.36
VPS28YPL065W BRN1P38170 754 aa6.53□□□□□ -1.36
VPS28YPL065W CHZ1P40019 153 aaPredicted RBP6.53□□□□□ -1.36
VPS28YPL065W CCM1P48237 864 aaPredicted RBP6.53□□□□□ -1.36
VPS28YPL065W YLR040CQ07988 224 aa6.53□□□□□ -1.36
VPS28YPL065W YOL073CQ08232 322 aa6.53□□□□□ -1.36
VPS28YPL065W GAL11P19659 1081 aa6.52□□□□□ -1.37
VPS28YPL065W ERG4P25340 473 aa6.52□□□□□ -1.37
VPS28YPL065W STE14P32584 239 aa6.52□□□□□ -1.37
VPS28YPL065W TAF8Q03750 510 aa6.52□□□□□ -1.37
VPS28YPL065W RFA1P22336 621 aaKnown RBP6.51□□□□□ -1.37
VPS28YPL065W NPP1P25353 742 aa6.51□□□□□ -1.37
VPS28YPL065W HBS1P32769 611 aaKnown RBP6.51□□□□□ -1.37
VPS28YPL065W GGA2P38817 585 aaKnown RBP6.51□□□□□ -1.37
VPS28YPL065W HUL4P40985 892 aa6.51□□□□□ -1.37
VPS28YPL065W BUL1P48524 976 aa6.51□□□□□ -1.37
VPS28YPL065W RTA1P53047 317 aa6.51□□□□□ -1.37
VPS28YPL065W PHO8P11491 566 aa6.5□□□□□ -1.37
VPS28YPL065W RRP14P36080 434 aaKnown RBP6.5□□□□□ -1.37
VPS28YPL065W SPC42P36094 363 aa6.5□□□□□ -1.37
VPS28YPL065W BET3P36149 193 aa6.5□□□□□ -1.37
VPS28YPL065W YBR284WP38150 797 aa6.5□□□□□ -1.37
VPS28YPL065W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.49□□□□□ -1.37not detected
VPS28YPL065W TIM44Q01852 431 aa6.49□□□□□ -1.37
VPS28YPL065W RNT1Q02555 471 aa6.49□□□□□ -1.37
VPS28YPL065W LCD1Q04377 747 aa6.49□□□□□ -1.37
VPS28YPL065W OMS1Q06668 471 aa6.49□□□□□ -1.37
VPS28YPL065W HBN1Q96VH4 193 aa6.49□□□□□ -1.37
VPS28YPL065W MET6P05694 767 aaKnown RBP6.48□□□□□ -1.37
VPS28YPL065W TOP3P13099 656 aa6.48□□□□□ -1.37
VPS28YPL065W CDC11P32458 415 aa6.48□□□□□ -1.37
VPS28YPL065W AFR1P33304 620 aa6.48□□□□□ -1.37
VPS28YPL065W YPT53P36019 220 aa6.48□□□□□ -1.37
VPS28YPL065W YDL124WQ07551 312 aaKnown RBP6.48□□□□□ -1.37
VPS28YPL065W SDP1P40479 209 aa6.47□□□□□ -1.37
VPS28YPL065W SSL1Q04673 461 aaPredicted RBP6.47□□□□□ -1.37
VPS28YPL065W PEX19Q07418 342 aa6.47□□□□□ -1.37
VPS28YPL065W YLR125WQ12138 136 aa6.47□□□□□ -1.37
VPS28YPL065W FBP1P09201 348 aa6.46□□□□□ -1.38
VPS28YPL065W TYE7P33122 291 aaPredicted RBP6.46□□□□□ -1.38
VPS28YPL065W YIL108WP40483 696 aaKnown RBP6.46□□□□□ -1.38
VPS28YPL065W DOS2P54858 310 aa6.46□□□□□ -1.38
VPS28YPL065W MCH5Q08777 521 aa6.46□□□□□ -1.38
VPS28YPL065W ACF2Q12168 779 aa6.46□□□□□ -1.38
VPS28YPL065W THI4P32318 326 aa6.45□□□□□ -1.38
VPS28YPL065W REC104P33323 182 aa6.45□□□□□ -1.38
VPS28YPL065W STU2P46675 888 aa6.45□□□□□ -1.38
VPS28YPL065W YPR071WQ12346 211 aa6.45□□□□□ -1.38
VPS28YPL065W SWM1Q12379 170 aa6.45□□□□□ -1.38
VPS28YPL065W ERT1P38140 529 aa6.44□□□□□ -1.38
VPS28YPL065W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.44□□□□□ -1.38not detected
VPS28YPL065W YKR011CQ02209 353 aa6.44□□□□□ -1.38
VPS28YPL065W PPR1P07272 904 aaPredicted RBP6.43□□□□□ -1.38
VPS28YPL065W MSD1P15179 658 aaKnown RBP6.43□□□□□ -1.38
VPS28YPL065W SEC21P32074 935 aaKnown RBP6.43□□□□□ -1.38
VPS28YPL065W CTF8P38877 133 aa6.43□□□□□ -1.38
VPS28YPL065W TOK1P40310 691 aa6.43□□□□□ -1.38
VPS28YPL065W CEP3P40969 608 aa6.43□□□□□ -1.38
VPS28YPL065W SLU7Q02775 382 aaKnown RBP6.43□□□□□ -1.38
VPS28YPL065W BUL2Q03758 920 aaKnown RBP6.43□□□□□ -1.38
VPS28YPL065W TRM11Q12463 433 aa6.43□□□□□ -1.38
VPS28YPL065W RPS9AO13516 197 aaKnown RBP6.42□□□□□ -1.38
VPS28YPL065W TOM70P07213 617 aaKnown RBP6.42□□□□□ -1.38
VPS28YPL065W ALG7P07286 448 aa6.42□□□□□ -1.38
VPS28YPL065W RPD3P32561 433 aa6.42□□□□□ -1.38
VPS28YPL065W MET3P08536 511 aa6.41□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms