RNA–Protein interactions for RNA: YOR381W

FRE3, Transcript of Ferric reductase, yeast

Gene FRE3, Length 2,136 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRE3	YOR381W	YKR078W	P36158	585 aa	Known RBP	5.5	□□□□□ -1.53
FRE3	YOR381W	PEX18	P38855	283 aa		5.5	□□□□□ -1.53
FRE3	YOR381W	ALG5	P40350	334 aa		5.5	□□□□□ -1.53
FRE3	YOR381W	ECL1	P48235	211 aa		5.5	□□□□□ -1.53
FRE3	YOR381W	RFX1	P48743	811 aa		5.5	□□□□□ -1.53
FRE3	YOR381W	MSN5	P52918	1224 aa		5.5	□□□□□ -1.53
FRE3	YOR381W	SHE9	Q04172	456 aa		5.5	□□□□□ -1.53
FRE3	YOR381W	TMA64	Q04600	565 aa	Known RBP	5.5	□□□□□ -1.53
FRE3	YOR381W	YDR341C	Q05506	607 aa	Known RBP	5.5	□□□□□ -1.53
FRE3	YOR381W	RPN8	Q08723	338 aa	Known RBP	5.5	□□□□□ -1.53
FRE3	YOR381W	CLF1	Q12309	687 aa	Predicted RBP	5.5	□□□□□ -1.53
FRE3	YOR381W	BBP1	Q12365	385 aa		5.5	□□□□□ -1.53
FRE3	YOR381W	SEY1	Q99287	776 aa		5.5	□□□□□ -1.53
FRE3	YOR381W	SEC7	P11075	2009 aa	Known RBP	5.49	□□□□□ -1.53
FRE3	YOR381W	POL3	P15436	1097 aa		5.49	□□□□□ -1.53
FRE3	YOR381W	YCR016W	P25617	290 aa	Known RBP	5.49	□□□□□ -1.53
FRE3	YOR381W	YJU2	P28320	278 aa	Predicted RBP	5.49	□□□□□ -1.53
FRE3	YOR381W	OCT1	P35999	772 aa		5.49	□□□□□ -1.53
FRE3	YOR381W	SSF1	P38789	453 aa	Predicted RBP	5.49	□□□□□ -1.53
FRE3	YOR381W	ERP5	P38819	212 aa		5.49	□□□□□ -1.53
FRE3	YOR381W	VFA1	P40080	203 aa		5.49	□□□□□ -1.53
FRE3	YOR381W	SIP5	P40210	489 aa	Known RBP	5.49	□□□□□ -1.53
FRE3	YOR381W	RLP7	P40693	322 aa	Known RBP	5.49	□□□□□ -1.53
FRE3	YOR381W	IES1	P43579	692 aa		5.49	□□□□□ -1.53
FRE3	YOR381W	ATG36	P46983	293 aa		5.49	□□□□□ -1.53
FRE3	YOR381W	HAM1	P47119	197 aa	Known RBP	5.49	□□□□□ -1.53
FRE3	YOR381W	MON1	P53129	644 aa		5.49	□□□□□ -1.53
FRE3	YOR381W	FAR11	P53917	953 aa		5.49	□□□□□ -1.53
FRE3	YOR381W	RPT6	Q01939	405 aa	Known RBP	5.49	□□□□□ -1.53
FRE3	YOR381W	NSE3	Q05541	303 aa		5.49	□□□□□ -1.53
FRE3	YOR381W	COA4	Q05809	96 aa		5.49	□□□□□ -1.53
FRE3	YOR381W	MCP2	Q06567	569 aa		5.49	□□□□□ -1.53
FRE3	YOR381W	UIP4	Q08926	304 aa		5.49	□□□□□ -1.53
FRE3	YOR381W	PPR1	P07272	904 aa	Predicted RBP	5.48	□□□□□ -1.53
FRE3	YOR381W	SEC15	P22224	910 aa		5.48	□□□□□ -1.53
FRE3	YOR381W	URA1	P28272	314 aa	Predicted RBP	5.48	□□□□□ -1.53
FRE3	YOR381W	NUP133	P36161	1157 aa		5.48	□□□□□ -1.53
FRE3	YOR381W	KTR3	P38130	404 aa	Predicted RBP	5.48	□□□□□ -1.53
FRE3	YOR381W	PIK1	P39104	1066 aa		5.48	□□□□□ -1.53
FRE3	YOR381W	SMX2	P40204	77 aa	Known RBP	5.48	□□□□□ -1.53
FRE3	YOR381W	JEM1	P40358	645 aa		5.48	□□□□□ -1.53
FRE3	YOR381W	FMP33	P46998	180 aa		5.48	□□□□□ -1.53
FRE3	YOR381W	RNR4	P49723	345 aa	Known RBP	5.48	□□□□□ -1.53
FRE3	YOR381W	CUE3	P53137	624 aa	Known RBP	5.48	□□□□□ -1.53
FRE3	YOR381W	LSC2	P53312	427 aa		5.48	□□□□□ -1.53
FRE3	YOR381W	LSC1	P53598	329 aa	Known RBP	5.48	□□□□□ -1.53
FRE3	YOR381W	YDR179W-A	Q03983	463 aa		5.48	□□□□□ -1.53
FRE3	YOR381W	PNP1	Q05788	311 aa		5.48	□□□□□ -1.53
FRE3	YOR381W	TFB4	Q12004	338 aa		5.48	□□□□□ -1.53
FRE3	YOR381W	RIO1	Q12196	484 aa	Known RBP	5.48	□□□□□ -1.53
FRE3	YOR381W	DBP10	Q12389	995 aa	Known RBP	5.48	□□□□□ -1.53
FRE3	YOR381W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	5.48	□□□□□ -1.53	not detected
FRE3	YOR381W	PEP7	P32609	515 aa		5.48	□□□□□ -1.53
FRE3	YOR381W	SEC6	P32844	805 aa		5.48	□□□□□ -1.53
FRE3	YOR381W	AST1	P35183	429 aa		5.48	□□□□□ -1.53
FRE3	YOR381W	RPC25	P35718	212 aa		5.48	□□□□□ -1.53
FRE3	YOR381W	KIC1	P38692	1080 aa		5.48	□□□□□ -1.53
FRE3	YOR381W	RPC17	P47076	161 aa		5.48	□□□□□ -1.53
FRE3	YOR381W	KAP114	P53067	1004 aa		5.48	□□□□□ -1.53
FRE3	YOR381W	YGR016W	P53209	190 aa		5.48	□□□□□ -1.53
FRE3	YOR381W	YNL040W	P53960	456 aa	Predicted RBP	5.48	□□□□□ -1.53
FRE3	YOR381W	TMA20	P89886	181 aa	Predicted RBP	5.48	□□□□□ -1.53
FRE3	YOR381W	ARP9	Q05123	467 aa		5.48	□□□□□ -1.53
FRE3	YOR381W	SEC10	Q06245	871 aa		5.48	□□□□□ -1.53
FRE3	YOR381W	VIP1	Q06685	1146 aa	Known RBP	5.48	□□□□□ -1.53
FRE3	YOR381W	FRA1	Q07825	749 aa		5.48	□□□□□ -1.53
FRE3	YOR381W	URB1	P34241	1764 aa	Known RBP	5.47	□□□□□ -1.53
FRE3	YOR381W	PET494	P07390	489 aa	Predicted RBP	5.47	□□□□□ -1.53
FRE3	YOR381W	YAK1	P14680	807 aa		5.47	□□□□□ -1.53
FRE3	YOR381W	POL30	P15873	258 aa	Known RBP	5.47	□□□□□ -1.53
FRE3	YOR381W	TEC1	P18412	486 aa		5.47	□□□□□ -1.53
FRE3	YOR381W	MSH2	P25847	964 aa		5.47	□□□□□ -1.53
FRE3	YOR381W	SLA1	P32790	1244 aa		5.47	□□□□□ -1.53
FRE3	YOR381W	YHR020W	P38708	688 aa	Known RBP	5.47	□□□□□ -1.53
FRE3	YOR381W	IPL1	P38991	367 aa		5.47	□□□□□ -1.53
FRE3	YOR381W	YHB1	P39676	399 aa	Known RBP	5.47	□□□□□ -1.53
FRE3	YOR381W	FCY21	P40039	528 aa		5.47	□□□□□ -1.53
FRE3	YOR381W	UBP15	P50101	1230 aa		5.47	□□□□□ -1.53
FRE3	YOR381W	NOP15	P53927	220 aa	Predicted RBP	5.47	□□□□□ -1.53
FRE3	YOR381W	SLU7	Q02775	382 aa	Known RBP	5.47	□□□□□ -1.53
FRE3	YOR381W	PKH3	Q03306	898 aa	Predicted RBP	5.47	□□□□□ -1.53
FRE3	YOR381W	DML1	Q03652	475 aa		5.47	□□□□□ -1.53
FRE3	YOR381W	ITT1	Q04638	464 aa		5.47	□□□□□ -1.53
FRE3	YOR381W	CSC1	Q06538	782 aa		5.47	□□□□□ -1.53
FRE3	YOR381W	PSR2	Q07949	397 aa		5.47	□□□□□ -1.53
FRE3	YOR381W	CWC2	Q12046	339 aa	Predicted RBP	5.47	□□□□□ -1.53
FRE3	YOR381W	YBL113C	Q7M4S9	792 aa		5.47	□□□□□ -1.53
FRE3	YOR381W	CMD1	P06787	147 aa	Known RBP	5.47	□□□□□ -1.53
FRE3	YOR381W	MPH2	P0CD99	609 aa		5.47	□□□□□ -1.53
FRE3	YOR381W	YML002W	P0CF17	737 aa		5.47	□□□□□ -1.53
FRE3	YOR381W	MSS116	P15424	664 aa	Known RBP	5.47	□□□□□ -1.53
FRE3	YOR381W	MIF2	P35201	549 aa		5.47	□□□□□ -1.53
FRE3	YOR381W	MCD4	P36051	919 aa		5.47	□□□□□ -1.53
FRE3	YOR381W	SMC2	P38989	1170 aa	Known RBP	5.47	□□□□□ -1.53
FRE3	YOR381W	NPT1	P39683	429 aa	Known RBP	5.47	□□□□□ -1.53
FRE3	YOR381W	CAB2	P40506	365 aa		5.47	□□□□□ -1.53
FRE3	YOR381W	EMW1	P42842	904 aa	Known RBP	5.47	□□□□□ -1.53
FRE3	YOR381W	LAM5	P43560	674 aa		5.47	□□□□□ -1.53
FRE3	YOR381W	SWP1	Q02795	286 aa		5.47	□□□□□ -1.53
FRE3	YOR381W	YDR306C	Q06640	478 aa		5.47	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms