RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	CTS1	P29029	562 aa		4.76	□□□□□ -1.65
CAF20	YOR276W	SEC6	P32844	805 aa		4.76	□□□□□ -1.65
CAF20	YOR276W	REC104	P33323	182 aa		4.76	□□□□□ -1.65
CAF20	YOR276W	YKL151C	P36059	337 aa		4.76	□□□□□ -1.65
CAF20	YOR276W	UGA2	P38067	497 aa		4.76	□□□□□ -1.65
CAF20	YOR276W	ENP1	P38333	483 aa	Known RBP	4.76	□□□□□ -1.65
CAF20	YOR276W	GYP8	P43570	497 aa		4.76	□□□□□ -1.65
CAF20	YOR276W	SPT20	P50875	604 aa		4.76	□□□□□ -1.65
CAF20	YOR276W	PEX8	P53248	589 aa		4.76	□□□□□ -1.65
CAF20	YOR276W	GSF2	Q04697	403 aa	Known RBP	4.76	□□□□□ -1.65
CAF20	YOR276W	YBR238C	P38330	731 aa	Known RBP	4.75	□□□□□ -1.65
CAF20	YOR276W	MGS1	P40151	587 aa		4.75	□□□□□ -1.65
CAF20	YOR276W	SFL1	P20134	766 aa		4.74	□□□□□ -1.65
CAF20	YOR276W	PCL2	P25693	308 aa		4.74	□□□□□ -1.65
CAF20	YOR276W	SHM2	P37291	469 aa	Known RBP	4.74	□□□□□ -1.65
CAF20	YOR276W	PMC1	P38929	1173 aa	Predicted RBP	4.74	□□□□□ -1.65
CAF20	YOR276W	NOP2	P40991	618 aa	Known RBP	4.74	□□□□□ -1.65
CAF20	YOR276W	CCM1	P48237	864 aa	Predicted RBP	4.74	□□□□□ -1.65
CAF20	YOR276W	MET13	P53128	600 aa		4.74	□□□□□ -1.65
CAF20	YOR276W	YGR283C	P53336	341 aa	Predicted RBP	4.74	□□□□□ -1.65
CAF20	YOR276W	DUS4	Q06063	367 aa		4.74	□□□□□ -1.65
CAF20	YOR276W	BI4	P03879	638 aa		4.73	□□□□□ -1.65
CAF20	YOR276W	PER1	P25625	357 aa		4.73	□□□□□ -1.65
CAF20	YOR276W	MTC2	P34246	357 aa		4.73	□□□□□ -1.65
CAF20	YOR276W	TSL1	P38427	1098 aa	Known RBP	4.73	□□□□□ -1.65
CAF20	YOR276W	GPP1	P41277	250 aa	Known RBP	4.73	□□□□□ -1.65
CAF20	YOR276W	TY4A-J	P47023	414 aa		4.73	□□□□□ -1.65
CAF20	YOR276W	PLB2	Q03674	706 aa		4.73	□□□□□ -1.65
CAF20	YOR276W	MTQ2	Q03920	221 aa	Predicted RBP	4.73	□□□□□ -1.65
CAF20	YOR276W	SND1	Q04007	877 aa		4.73	□□□□□ -1.65
CAF20	YOR276W	HFD1	Q04458	532 aa		4.73	□□□□□ -1.65
CAF20	YOR276W	RSC3	Q06639	885 aa		4.73	□□□□□ -1.65
CAF20	YOR276W	MET7	Q08645	548 aa		4.73	□□□□□ -1.65
CAF20	YOR276W	EUG1	P32474	517 aa		4.72	□□□□□ -1.65
CAF20	YOR276W	PRP19	P32523	503 aa	Known RBP	4.72	□□□□□ -1.65
CAF20	YOR276W	STO1	P34160	861 aa	Known RBP	4.72	□□□□□ -1.65
CAF20	YOR276W	RFC5	P38251	354 aa		4.72	□□□□□ -1.65
CAF20	YOR276W	DAM1	P53267	343 aa		4.72	□□□□□ -1.65
CAF20	YOR276W	COG6	P53959	839 aa		4.72	□□□□□ -1.65
CAF20	YOR276W	ROT1	Q03691	256 aa		4.72	□□□□□ -1.65
CAF20	YOR276W	RSM24	Q03976	319 aa		4.72	□□□□□ -1.65
CAF20	YOR276W	MDM38	Q08179	573 aa		4.72	□□□□□ -1.65
CAF20	YOR276W	ENV7	Q12003	364 aa		4.72	□□□□□ -1.65
CAF20	YOR276W	SWE1	P32944	819 aa		4.71	□□□□□ -1.66
CAF20	YOR276W	EMC3	P36039	253 aa		4.71	□□□□□ -1.66
CAF20	YOR276W	YBR071W	P38243	211 aa		4.71	□□□□□ -1.66
CAF20	YOR276W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.71	□□□□□ -1.66	not detected
CAF20	YOR276W	NPP2	P39997	493 aa		4.71	□□□□□ -1.66
CAF20	YOR276W	YER158C	P40095	573 aa		4.71	□□□□□ -1.66
CAF20	YOR276W	CAF16	P43569	289 aa		4.71	□□□□□ -1.66
CAF20	YOR276W	YJR096W	P47137	282 aa		4.71	□□□□□ -1.66
CAF20	YOR276W	NIT3	P49954	291 aa		4.71	□□□□□ -1.66
CAF20	YOR276W	AIM14	P53109	570 aa		4.71	□□□□□ -1.66
CAF20	YOR276W	PEX14	P53112	341 aa		4.71	□□□□□ -1.66
CAF20	YOR276W	SUB1	P54000	292 aa	Known RBP	4.71	□□□□□ -1.66
CAF20	YOR276W	ATP25	Q03153	612 aa		4.71	□□□□□ -1.66
CAF20	YOR276W	GUD1	Q07729	489 aa		4.71	□□□□□ -1.66
CAF20	YOR276W	SLX4	Q12098	748 aa		4.71	□□□□□ -1.66
CAF20	YOR276W	RIB2	Q12362	591 aa	Known RBP	4.71	□□□□□ -1.66
CAF20	YOR276W	TMA7	Q3E764	64 aa	Known RBP	4.71	□□□□□ -1.66
CAF20	YOR276W	TUB2	P02557	457 aa	Known RBP	4.7	□□□□□ -1.66
CAF20	YOR276W	GAL10	P04397	699 aa		4.7	□□□□□ -1.66
CAF20	YOR276W	THS1	P04801	734 aa	Known RBP	4.7	□□□□□ -1.66
CAF20	YOR276W	CMP2	P14747	604 aa		4.7	□□□□□ -1.66
CAF20	YOR276W	TFC4	P33339	1025 aa		4.7	□□□□□ -1.66
CAF20	YOR276W	YEL1	P34225	687 aa		4.7	□□□□□ -1.66
CAF20	YOR276W	MCD4	P36051	919 aa		4.7	□□□□□ -1.66
CAF20	YOR276W	GIC1	P38785	314 aa		4.7	□□□□□ -1.66
CAF20	YOR276W	DAS1	P47005	663 aa		4.7	□□□□□ -1.66
CAF20	YOR276W	GYP7	P48365	746 aa		4.7	□□□□□ -1.66
CAF20	YOR276W	MTC3	P53077	123 aa		4.7	□□□□□ -1.66
CAF20	YOR276W	SFB2	P53953	876 aa		4.7	□□□□□ -1.66
CAF20	YOR276W	YDR514C	Q04408	483 aa		4.7	□□□□□ -1.66
CAF20	YOR276W	YPR196W	Q06595	470 aa		4.7	□□□□□ -1.66
CAF20	YOR276W	TRE2	Q08693	809 aa		4.7	□□□□□ -1.66
CAF20	YOR276W	YOR378W	Q08902	515 aa		4.7	□□□□□ -1.66
CAF20	YOR276W	CDC48	P25694	835 aa	Known RBP	4.69	□□□□□ -1.66
CAF20	YOR276W	YKR078W	P36158	585 aa	Known RBP	4.69	□□□□□ -1.66
CAF20	YOR276W	PCM1	P38628	557 aa	Known RBP	4.69	□□□□□ -1.66
CAF20	YOR276W	SRT1	Q03175	343 aa		4.69	□□□□□ -1.66
CAF20	YOR276W	SIZ1	Q04195	904 aa		4.69	□□□□□ -1.66
CAF20	YOR276W	ATG33	Q06485	197 aa		4.69	□□□□□ -1.66
CAF20	YOR276W	BUD21	Q08492	214 aa	Predicted RBP	4.69	□□□□□ -1.66
CAF20	YOR276W	YLL058W	Q12198	575 aa		4.69	□□□□□ -1.66
CAF20	YOR276W	SVS1	Q12254	260 aa		4.69	□□□□□ -1.66
CAF20	YOR276W	NYV1	Q12255	253 aa		4.69	□□□□□ -1.66
CAF20	YOR276W	CDC6	P09119	513 aa		4.68	□□□□□ -1.66
CAF20	YOR276W	MPH2	P0CD99	609 aa		4.68	□□□□□ -1.66
CAF20	YOR276W	HMG1	P12683	1054 aa		4.68	□□□□□ -1.66
CAF20	YOR276W	KIN2	P13186	1147 aa	Known RBP	4.68	□□□□□ -1.66
CAF20	YOR276W	CDC20	P26309	610 aa		4.68	□□□□□ -1.66
CAF20	YOR276W	HIR1	P32479	840 aa		4.68	□□□□□ -1.66
CAF20	YOR276W	HOG1	P32485	435 aa		4.68	□□□□□ -1.66
CAF20	YOR276W	CKB2	P38930	258 aa		4.68	□□□□□ -1.66
CAF20	YOR276W	SNP1	Q00916	300 aa	Predicted RBP	4.68	□□□□□ -1.66
CAF20	YOR276W	RXT3	Q07458	294 aa		4.68	□□□□□ -1.66
CAF20	YOR276W	MPD2	Q99316	277 aa		4.68	□□□□□ -1.66
CAF20	YOR276W	YEF3	P16521	1044 aa	Known RBP	4.67	□□□□□ -1.66
CAF20	YOR276W	PLC1	P32383	869 aa		4.67	□□□□□ -1.66
CAF20	YOR276W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 65 ms