RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP1YOR098C RSC3Q06639 885 aa6.06□□□□□ -1.44
NUP1YOR098C RRG1Q12167 365 aaPredicted RBP6.06□□□□□ -1.44
NUP1YOR098C ENT1Q12518 454 aa6.06□□□□□ -1.44
NUP1YOR098C MET8P15807 274 aa6.06□□□□□ -1.44
NUP1YOR098C RAD16P31244 790 aa6.06□□□□□ -1.44
NUP1YOR098C YKU70P32807 602 aa6.06□□□□□ -1.44
NUP1YOR098C EMP65P40085 556 aa6.06□□□□□ -1.44
NUP1YOR098C CCT5P40413 562 aaKnown RBP6.06□□□□□ -1.44
NUP1YOR098C TAD1P53065 400 aa6.06□□□□□ -1.44
NUP1YOR098C PRP43P53131 767 aaKnown RBP6.06□□□□□ -1.44
NUP1YOR098C GEA1P47102 1408 aaPredicted RBP6.06□□□□□ -1.44
NUP1YOR098C IME2P32581 645 aa6.06□□□□□ -1.44
NUP1YOR098C YBL086CP38177 466 aa6.06□□□□□ -1.44
NUP1YOR098C YBR238CP38330 731 aaKnown RBP6.06□□□□□ -1.44
NUP1YOR098C RBG2P53295 368 aaKnown RBP6.06□□□□□ -1.44
NUP1YOR098C CNM67P53865 581 aaKnown RBP6.06□□□□□ -1.44
NUP1YOR098C SKY1Q03656 742 aa6.06□□□□□ -1.44
NUP1YOR098C SAS4Q04003 481 aa6.06□□□□□ -1.44
NUP1YOR098C TAF11Q04226 346 aa6.06□□□□□ -1.44
NUP1YOR098C RPS21AP0C0V8 87 aaKnown RBP6.05□□□□□ -1.44
NUP1YOR098C FUR1P18562 216 aaKnown RBP6.05□□□□□ -1.44
NUP1YOR098C DID4P36108 232 aa6.05□□□□□ -1.44
NUP1YOR098C FUN12P39730 1002 aaKnown RBP6.05□□□□□ -1.44
NUP1YOR098C DLD3P39976 496 aaKnown RBP6.05□□□□□ -1.44
NUP1YOR098C TIM10P87108 93 aa6.05□□□□□ -1.44
NUP1YOR098C YLR287CQ05881 355 aa6.05□□□□□ -1.44
NUP1YOR098C YPR027CQ12079 277 aa6.05□□□□□ -1.44
NUP1YOR098C TRK1P12685 1235 aa6.05□□□□□ -1.44
NUP1YOR098C PAH1P32567 862 aa6.05□□□□□ -1.44
NUP1YOR098C MCD4P36051 919 aa6.05□□□□□ -1.44
NUP1YOR098C YNL035CP53962 389 aaKnown RBP6.05□□□□□ -1.44
NUP1YOR098C SGD1Q06132 899 aa6.05□□□□□ -1.44
NUP1YOR098C SMC4Q12267 1418 aa6.05□□□□□ -1.44
NUP1YOR098C SCT1P32784 759 aa6.04□□□□□ -1.44
NUP1YOR098C MDJ1P35191 511 aa6.04□□□□□ -1.44
NUP1YOR098C RRP9Q06506 573 aaKnown RBP6.04□□□□□ -1.44
NUP1YOR098C GUP2Q08929 609 aa6.04□□□□□ -1.44
NUP1YOR098C ENA1P13587 1091 aa6.04□□□□□ -1.44
NUP1YOR098C RGP1P16664 663 aa6.04□□□□□ -1.44
NUP1YOR098C RET1P22276 1149 aaKnown RBP6.04□□□□□ -1.44
NUP1YOR098C HOG1P32485 435 aa6.04□□□□□ -1.44
NUP1YOR098C ULI1P43604 169 aa6.04□□□□□ -1.44
NUP1YOR098C BFA1P47113 574 aa6.04□□□□□ -1.44
NUP1YOR098C ENA2Q01896 1091 aa6.04□□□□□ -1.44
NUP1YOR098C COG8Q04632 607 aa6.04□□□□□ -1.44
NUP1YOR098C PGC1Q08959 321 aa6.04□□□□□ -1.44
NUP1YOR098C PSH1Q12161 406 aa6.04□□□□□ -1.44
NUP1YOR098C TCB1Q12466 1186 aa6.04□□□□□ -1.44
NUP1YOR098C ENA5Q12691 1091 aa6.04□□□□□ -1.44
NUP1YOR098C PDR15Q04182 1529 aaKnown RBP6.04□□□□□ -1.44
NUP1YOR098C DAL7P21826 554 aa6.04□□□□□ -1.44
NUP1YOR098C AFR1P33304 620 aa6.04□□□□□ -1.44
NUP1YOR098C NOP16P40007 231 aaKnown RBP6.04□□□□□ -1.44
NUP1YOR098C TPA1P40032 644 aaKnown RBP6.04□□□□□ -1.44
NUP1YOR098C JJJ2P46997 583 aa6.04□□□□□ -1.44
NUP1YOR098C YGR283CP53336 341 aaPredicted RBP6.04□□□□□ -1.44
NUP1YOR098C MRPL19P53875 158 aa6.04□□□□□ -1.44
NUP1YOR098C DUS3Q06053 668 aaKnown RBP6.04□□□□□ -1.44
NUP1YOR098C PGS1P25578 521 aa6.03□□□□□ -1.44
NUP1YOR098C SHU2P38957 223 aa6.03□□□□□ -1.44
NUP1YOR098C YNL058CP53947 316 aa6.03□□□□□ -1.44
NUP1YOR098C CUS1Q02554 436 aaPredicted RBP6.03□□□□□ -1.44
NUP1YOR098C YPL191CQ08930 360 aa6.03□□□□□ -1.44
NUP1YOR098C HSP42Q12329 375 aa6.03□□□□□ -1.44
NUP1YOR098C SRB8P25648 1427 aa6.03□□□□□ -1.44
NUP1YOR098C LRP1P38801 184 aaKnown RBP6.03□□□□□ -1.44
NUP1YOR098C HXT6P39003 570 aaKnown RBP6.03□□□□□ -1.44
NUP1YOR098C HXT7P39004 570 aa6.03□□□□□ -1.44
NUP1YOR098C RGA1P39083 1007 aa6.03□□□□□ -1.44
NUP1YOR098C YTA6P40328 754 aa6.03□□□□□ -1.44
NUP1YOR098C DPH1P40487 425 aaKnown RBP6.03□□□□□ -1.44
NUP1YOR098C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44 RIP-Chip
NUP1YOR098C FUN30P31380 1131 aa6.03□□□□□ -1.44
NUP1YOR098C SHM2P37291 469 aaKnown RBP6.03□□□□□ -1.44
NUP1YOR098C SSN3P39073 555 aa6.03□□□□□ -1.44
NUP1YOR098C YEL068CP39977 110 aa6.03□□□□□ -1.44
NUP1YOR098C TOK1P40310 691 aa6.03□□□□□ -1.44
NUP1YOR098C VHR1P40522 640 aa6.03□□□□□ -1.44
NUP1YOR098C TEP1P53916 434 aa6.03□□□□□ -1.44
NUP1YOR098C LCD1Q04377 747 aa6.03□□□□□ -1.44
NUP1YOR098C IRC20Q06554 1556 aa6.02□□□□□ -1.45
NUP1YOR098C TY1A-LR4P0C2I8 440 aaKnown RBP6.02□□□□□ -1.45
NUP1YOR098C TY1A-DR6P0CX70 440 aa6.02□□□□□ -1.45
NUP1YOR098C TY1A-ER1P0CX71 440 aa6.02□□□□□ -1.45
NUP1YOR098C TY1A-LR2P0CX72 440 aa6.02□□□□□ -1.45
NUP1YOR098C TY1A-PLP0CX73 440 aa6.02□□□□□ -1.45
NUP1YOR098C TY1A-JR1P0CX74 440 aa6.02□□□□□ -1.45
NUP1YOR098C TY1A-LR3P0CX75 440 aa6.02□□□□□ -1.45
NUP1YOR098C TY1A-ML2P0CX76 440 aa6.02□□□□□ -1.45
NUP1YOR098C MSH1P25846 959 aa6.02□□□□□ -1.45
NUP1YOR098C SEG2P34250 1132 aa6.02□□□□□ -1.45
NUP1YOR098C YRO2P38079 344 aa6.02□□□□□ -1.45
NUP1YOR098C IRC6P43615 237 aa6.02□□□□□ -1.45
NUP1YOR098C ARH1P48360 493 aa6.02□□□□□ -1.45
NUP1YOR098C BNI4P53858 892 aa6.02□□□□□ -1.45
NUP1YOR098C TY1A-GR1Q12085 440 aa6.02□□□□□ -1.45
NUP1YOR098C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.02□□□□□ -1.45
NUP1YOR098C TY1A-OLQ92392 440 aaKnown RBP6.02□□□□□ -1.45
NUP1YOR098C CLC1P17891 233 aa6.02□□□□□ -1.45
NUP1YOR098C CMK1P27466 446 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms