RNA–Protein interactions for RNA: YMR179W

SPT21, Transcript of Protein with a role in transcriptional silencing, yeastyeast

Gene SPT21, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT21YMR179W YML122CQ03207 126 aa2.53□□□□□ -2
SPT21YMR179W MCH5Q08777 521 aa2.53□□□□□ -2
SPT21YMR179W CTF13P35203 478 aa2.53□□□□□ -2
SPT21YMR179W HDA1P53973 706 aa2.53□□□□□ -2
SPT21YMR179W MUK1Q02866 612 aa2.53□□□□□ -2
SPT21YMR179W PEX19Q07418 342 aa2.53□□□□□ -2
SPT21YMR179W ACF2Q12168 779 aa2.53□□□□□ -2
SPT21YMR179W ALG7P07286 448 aa2.52□□□□□ -2.01
SPT21YMR179W VAC8P39968 578 aa2.52□□□□□ -2.01
SPT21YMR179W TOK1P40310 691 aa2.52□□□□□ -2.01
SPT21YMR179W YIL108WP40483 696 aaKnown RBP2.52□□□□□ -2.01
SPT21YMR179W CCM1P48237 864 aaPredicted RBP2.52□□□□□ -2.01
SPT21YMR179W ALD6P54115 500 aaKnown RBP2.52□□□□□ -2.01
SPT21YMR179W YKR011CQ02209 353 aa2.52□□□□□ -2.01
SPT21YMR179W YMR206WQ03695 313 aa2.52□□□□□ -2.01
SPT21YMR179W LCD1Q04377 747 aa2.52□□□□□ -2.01
SPT21YMR179W PRP4P20053 465 aaKnown RBP2.51□□□□□ -2.01
SPT21YMR179W TYE7P33122 291 aaPredicted RBP2.51□□□□□ -2.01
SPT21YMR179W YBR184WP38299 523 aa2.51□□□□□ -2.01
SPT21YMR179W VPS30Q02948 557 aa2.51□□□□□ -2.01
SPT21YMR179W IRC10Q08118 586 aa2.51□□□□□ -2.01
SPT21YMR179W TRM11Q12463 433 aa2.51□□□□□ -2.01
SPT21YMR179W PRP9P19736 530 aaKnown RBP2.51□□□□□ -2.01
SPT21YMR179W URA1P28272 314 aaPredicted RBP2.51□□□□□ -2.01
SPT21YMR179W REC104P33323 182 aa2.51□□□□□ -2.01
SPT21YMR179W TPO2P53283 614 aa2.51□□□□□ -2.01
SPT21YMR179W MRPS35P53292 345 aa2.51□□□□□ -2.01
SPT21YMR179W TDA5Q06417 326 aaKnown RBP2.51□□□□□ -2.01
SPT21YMR179W RFA1P22336 621 aaKnown RBP2.5□□□□□ -2.01
SPT21YMR179W MTH1P35198 433 aa2.5□□□□□ -2.01
SPT21YMR179W CEP3P40969 608 aa2.5□□□□□ -2.01
SPT21YMR179W FMP25Q08023 583 aa2.5□□□□□ -2.01
SPT21YMR179W FRE5Q08908 694 aa2.5□□□□□ -2.01
SPT21YMR179W ELO3P40319 345 aa2.49□□□□□ -2.01
SPT21YMR179W STU2P46675 888 aa2.49□□□□□ -2.01
SPT21YMR179W UTP8P53276 713 aaKnown RBP2.49□□□□□ -2.01
SPT21YMR179W TIM44Q01852 431 aa2.49□□□□□ -2.01
SPT21YMR179W SWM1Q12379 170 aa2.49□□□□□ -2.01
SPT21YMR179W PPS1P38148 807 aa2.49□□□□□ -2.01
SPT21YMR179W YHR078WP38799 552 aa2.49□□□□□ -2.01
SPT21YMR179W GND2P53319 492 aa2.49□□□□□ -2.01
SPT21YMR179W DLT1Q04216 342 aa2.49□□□□□ -2.01
SPT21YMR179W ENV7Q12003 364 aa2.49□□□□□ -2.01
SPT21YMR179W YPR071WQ12346 211 aa2.49□□□□□ -2.01
SPT21YMR179W MET3P08536 511 aa2.48□□□□□ -2.01
SPT21YMR179W YBR284WP38150 797 aa2.48□□□□□ -2.01
SPT21YMR179W RPP1P38786 293 aa2.48□□□□□ -2.01
SPT21YMR179W ATF1P40353 525 aa2.48□□□□□ -2.01
SPT21YMR179W SDS3P40505 327 aa2.48□□□□□ -2.01
SPT21YMR179W ALR2P43553 858 aa2.48□□□□□ -2.01
SPT21YMR179W ASI2P53895 289 aa2.48□□□□□ -2.01
SPT21YMR179W ADY4Q05955 493 aa2.48□□□□□ -2.01
SPT21YMR179W SSF2Q12153 453 aaPredicted RBP2.48□□□□□ -2.01
SPT21YMR179W MSD1P15179 658 aaKnown RBP2.48□□□□□ -2.01
SPT21YMR179W GRX1P25373 110 aaKnown RBP2.48□□□□□ -2.01
SPT21YMR179W RPL8BP29453 256 aaKnown RBP2.48□□□□□ -2.01
SPT21YMR179W SPC42P36094 363 aa2.48□□□□□ -2.01
SPT21YMR179W PET10P36139 283 aa2.48□□□□□ -2.01
SPT21YMR179W YBR053CP38235 358 aa2.48□□□□□ -2.01
SPT21YMR179W VHR1P40522 640 aa2.48□□□□□ -2.01
SPT21YMR179W FKH2P41813 862 aa2.48□□□□□ -2.01
SPT21YMR179W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
SPT21YMR179W HBN1Q96VH4 193 aa2.48□□□□□ -2.01
SPT21YMR179W MPH2P0CD99 609 aa2.47□□□□□ -2.01
SPT21YMR179W CAF20P12962 161 aaKnown RBP2.47□□□□□ -2.01
SPT21YMR179W CDC11P32458 415 aa2.47□□□□□ -2.01
SPT21YMR179W MUP1P50276 574 aa2.47□□□□□ -2.01
SPT21YMR179W UBX5Q06682 500 aa2.47□□□□□ -2.01
SPT21YMR179W HAL9Q12180 1030 aa2.47□□□□□ -2.01
SPT21YMR179W PAM1P37304 830 aaKnown RBP2.47□□□□□ -2.01
SPT21YMR179W YHL017WP38745 532 aa2.47□□□□□ -2.01
SPT21YMR179W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
SPT21YMR179W SNU71P53207 620 aaKnown RBP2.47□□□□□ -2.01
SPT21YMR179W DUS1P53759 423 aaKnown RBP2.47□□□□□ -2.01
SPT21YMR179W TOP3P13099 656 aa2.46□□□□□ -2.02
SPT21YMR179W MUS81Q04149 632 aaPredicted RBP2.46□□□□□ -2.02
SPT21YMR179W EAF1Q06337 982 aa2.46□□□□□ -2.02
SPT21YMR179W HBT1Q07653 1046 aaKnown RBP2.46□□□□□ -2.02
SPT21YMR179W SUT2Q12286 268 aa2.46□□□□□ -2.02
SPT21YMR179W RPS9AO13516 197 aaKnown RBP2.45□□□□□ -2.02
SPT21YMR179W CYS3P31373 394 aaKnown RBP2.45□□□□□ -2.02
SPT21YMR179W CUE2P36075 443 aaKnown RBP2.45□□□□□ -2.02
SPT21YMR179W GGA2P38817 585 aaKnown RBP2.45□□□□□ -2.02
SPT21YMR179W YJL163CP46996 555 aa2.45□□□□□ -2.02
SPT21YMR179W DAS1P47005 663 aa2.45□□□□□ -2.02
SPT21YMR179W ERP6P53198 216 aa2.45□□□□□ -2.02
SPT21YMR179W MRH1Q12117 320 aaPredicted RBP2.45□□□□□ -2.02
SPT21YMR179W PUS2P53167 370 aa2.45□□□□□ -2.02
SPT21YMR179W NOG2P53742 486 aaKnown RBP2.45□□□□□ -2.02
SPT21YMR179W NAN1Q02931 896 aaKnown RBP2.45□□□□□ -2.02
SPT21YMR179W GPR1Q12361 961 aa2.45□□□□□ -2.02
SPT21YMR179W SCT1P32784 759 aa2.44□□□□□ -2.02
SPT21YMR179W AMA1P50082 593 aa2.44□□□□□ -2.02
SPT21YMR179W PKH1Q03407 766 aa2.44□□□□□ -2.02
SPT21YMR179W LRS4Q04087 347 aaKnown RBP2.44□□□□□ -2.02
SPT21YMR179W BDF2Q07442 638 aa2.44□□□□□ -2.02
SPT21YMR179W SPO75Q07798 868 aa2.44□□□□□ -2.02
SPT21YMR179W YOR022CQ12204 715 aa2.44□□□□□ -2.02
SPT21YMR179W DAL7P21826 554 aa2.44□□□□□ -2.02
SPT21YMR179W EMC3P36039 253 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms