RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C RKM4Q12504 494 aa4.45□□□□□ -1.7
SDO1YLR022C RPL11BQ3E757 174 aaPredicted RBP4.45□□□□□ -1.7
SDO1YLR022C RTC1Q08281 1341 aa4.45□□□□□ -1.7
SDO1YLR022C CYC1P00044 109 aaPredicted RBP4.44□□□□□ -1.7
SDO1YLR022C INO1P11986 533 aa4.44□□□□□ -1.7
SDO1YLR022C PRE10P21242 288 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
SDO1YLR022C DBP2P24783 546 aaKnown RBP4.44□□□□□ -1.7
SDO1YLR022C SLA2P33338 968 aa4.44□□□□□ -1.7
SDO1YLR022C LAM1P38851 1228 aa4.44□□□□□ -1.7
SDO1YLR022C PNT1P38969 423 aa4.44□□□□□ -1.7
SDO1YLR022C MXR1P40029 184 aa4.44□□□□□ -1.7
SDO1YLR022C ROT1Q03691 256 aa4.44□□□□□ -1.7
SDO1YLR022C RSM24Q03976 319 aa4.44□□□□□ -1.7
SDO1YLR022C SVF1Q05515 481 aa4.44□□□□□ -1.7
SDO1YLR022C YPL066WQ12194 479 aa4.44□□□□□ -1.7
SDO1YLR022C YLL066CQ99208 1374 aa4.43□□□□□ -1.7
SDO1YLR022C YMR084WA2P2R3 262 aa4.43□□□□□ -1.7
SDO1YLR022C TUB2P02557 457 aaKnown RBP4.43□□□□□ -1.7
SDO1YLR022C RPS24AP0CX31 135 aaKnown RBP4.43□□□□□ -1.7
SDO1YLR022C RPS24BP0CX32 135 aaKnown RBP4.43□□□□□ -1.7
SDO1YLR022C GRX1P25373 110 aaKnown RBP4.43□□□□□ -1.7
SDO1YLR022C SMY1P32364 656 aaKnown RBP4.43□□□□□ -1.7
SDO1YLR022C PFF1P38244 976 aa4.43□□□□□ -1.7
SDO1YLR022C MEF2P39677 819 aa4.43□□□□□ -1.7
SDO1YLR022C GEM1P39722 662 aa4.43□□□□□ -1.7
SDO1YLR022C GCN5Q03330 439 aa4.43□□□□□ -1.7
SDO1YLR022C RPO41P13433 1351 aaKnown RBP4.42□□□□□ -1.7
SDO1YLR022C BI4P03879 638 aa4.42□□□□□ -1.7
SDO1YLR022C FBP1P09201 348 aa4.42□□□□□ -1.7
SDO1YLR022C KIN2P13186 1147 aaKnown RBP4.42□□□□□ -1.7
SDO1YLR022C CLN2P20438 545 aa4.42□□□□□ -1.7
SDO1YLR022C ACE2P21192 770 aa4.42□□□□□ -1.7
SDO1YLR022C SRM1P21827 482 aa4.42□□□□□ -1.7
SDO1YLR022C MOT2P34909 587 aaKnown RBP4.42□□□□□ -1.7
SDO1YLR022C FAA4P47912 694 aaKnown RBP4.42□□□□□ -1.7
SDO1YLR022C SPO20Q04359 397 aa4.42□□□□□ -1.7
SDO1YLR022C SPP382Q06411 708 aaPredicted RBP4.42□□□□□ -1.7
SDO1YLR022C CTI6Q08923 506 aa4.42□□□□□ -1.7
SDO1YLR022C RIM15P43565 1770 aa4.41□□□□□ -1.7
SDO1YLR022C GAL10P04397 699 aa4.41□□□□□ -1.7
SDO1YLR022C CMP2P14747 604 aa4.41□□□□□ -1.7
SDO1YLR022C DOM34P33309 386 aa4.41□□□□□ -1.7
SDO1YLR022C YKL107WP34251 309 aa4.41□□□□□ -1.7
SDO1YLR022C TAT2P38967 592 aa4.41□□□□□ -1.7
SDO1YLR022C MPT5P39016 859 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
SDO1YLR022C PEA2P40091 420 aa4.41□□□□□ -1.7
SDO1YLR022C SIP5P40210 489 aaKnown RBP4.41□□□□□ -1.7
SDO1YLR022C MAP1Q01662 387 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
SDO1YLR022C VPS16Q03308 798 aa4.41□□□□□ -1.7
SDO1YLR022C PLB2Q03674 706 aa4.41□□□□□ -1.7
SDO1YLR022C DUS4Q06063 367 aa4.41□□□□□ -1.7
SDO1YLR022C PIN2Q12057 282 aa4.41□□□□□ -1.7
SDO1YLR022C YPR117WQ06116 2489 aa4.4□□□□□ -1.7
SDO1YLR022C YKU70P32807 602 aa4.4□□□□□ -1.71
SDO1YLR022C SNF7P39929 240 aaKnown RBP4.4□□□□□ -1.71
SDO1YLR022C YGL176CP46945 554 aa4.4□□□□□ -1.71
SDO1YLR022C GDE1Q02979 1223 aa4.4□□□□□ -1.71
SDO1YLR022C MSC2Q03455 724 aa4.4□□□□□ -1.71
SDO1YLR022C CDC6P09119 513 aa4.39□□□□□ -1.71
SDO1YLR022C MSM1P22438 575 aa4.39□□□□□ -1.71
SDO1YLR022C APL1P27351 700 aa4.39□□□□□ -1.71
SDO1YLR022C HFM1P51979 1187 aa4.39□□□□□ -1.71
SDO1YLR022C TIM50Q02776 476 aa4.39□□□□□ -1.71
SDO1YLR022C YLR225CQ05948 407 aaKnown RBP4.39□□□□□ -1.71
SDO1YLR022C SIR4P11978 1358 aa4.39□□□□□ -1.71
SDO1YLR022C YLL067CQ07888 1374 aa4.39□□□□□ -1.71
SDO1YLR022C LEU2P04173 364 aaPredicted RBP4.38□□□□□ -1.71
SDO1YLR022C PIN4P34217 668 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
SDO1YLR022C MTC3P53077 123 aa4.38□□□□□ -1.71
SDO1YLR022C ERO1Q03103 563 aa4.38□□□□□ -1.71
SDO1YLR022C ESC2Q06340 456 aa4.38□□□□□ -1.71
SDO1YLR022C YLL058WQ12198 575 aa4.38□□□□□ -1.71
SDO1YLR022C PNS1Q12412 539 aa4.38□□□□□ -1.71
SDO1YLR022C AGP1P25376 633 aa4.37□□□□□ -1.71
SDO1YLR022C SBA1P28707 216 aaKnown RBP4.37□□□□□ -1.71
SDO1YLR022C MAD1P40957 749 aa4.37□□□□□ -1.71
SDO1YLR022C KRI1P42846 591 aaKnown RBP4.37□□□□□ -1.71
SDO1YLR022C SNU71P53207 620 aaKnown RBP4.37□□□□□ -1.71
SDO1YLR022C PBP1P53297 722 aaKnown RBP4.37□□□□□ -1.71
SDO1YLR022C IRC3Q06683 689 aa4.37□□□□□ -1.71
SDO1YLR022C RXT3Q07458 294 aa4.37□□□□□ -1.71
SDO1YLR022C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
SDO1YLR022C CSR2Q12734 1121 aa4.37□□□□□ -1.71
SDO1YLR022C YIL177CP40434 1758 aa4.36□□□□□ -1.71
SDO1YLR022C YJL225CP40889 1758 aa4.36□□□□□ -1.71
SDO1YLR022C CDC20P26309 610 aa4.36□□□□□ -1.71
SDO1YLR022C ABD1P32783 436 aaPredicted RBP4.36□□□□□ -1.71
SDO1YLR022C YKL151CP36059 337 aa4.36□□□□□ -1.71
SDO1YLR022C VPS62P53285 467 aa4.36□□□□□ -1.71
SDO1YLR022C HRQ1Q05549 1077 aa4.36□□□□□ -1.71
SDO1YLR022C TMA10Q06177 86 aa4.36□□□□□ -1.71
SDO1YLR022C ACK1Q07622 623 aaPredicted RBP4.36□□□□□ -1.71
SDO1YLR022C GPB1Q08886 897 aa4.36□□□□□ -1.71
SDO1YLR022C GRX6Q12438 231 aa4.36□□□□□ -1.71
SDO1YLR022C ESL2P36168 1195 aa4.35□□□□□ -1.71
SDO1YLR022C APE3P37302 537 aaKnown RBP4.35□□□□□ -1.71
SDO1YLR022C JIP5Q06214 492 aaPredicted RBP4.35□□□□□ -1.71
SDO1YLR022C MDM38Q08179 573 aa4.35□□□□□ -1.71
SDO1YLR022C HMI1Q12039 706 aa4.35□□□□□ -1.71
SDO1YLR022C FAL1Q12099 399 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms