RNA–Protein interactions for RNA: YIL113W

SDP1, Transcript of Stress-inducible dual-specificity MAP kinase phosphatase, yeast

Gene SDP1, Length 630 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDP1	YIL113W	VPS16	Q03308	798 aa		4.09	□□□□□ -1.75
SDP1	YIL113W	UBX5	Q06682	500 aa		4.09	□□□□□ -1.75
SDP1	YIL113W	OPI10	Q08202	246 aa		4.09	□□□□□ -1.75
SDP1	YIL113W	MCH5	Q08777	521 aa		4.09	□□□□□ -1.75
SDP1	YIL113W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
SDP1	YIL113W	MAD1	P40957	749 aa		4.08	□□□□□ -1.76
SDP1	YIL113W	KRI1	P42846	591 aa	Known RBP	4.08	□□□□□ -1.76
SDP1	YIL113W	YKE2	P52553	114 aa		4.08	□□□□□ -1.76
SDP1	YIL113W	ALG7	P07286	448 aa		4.07	□□□□□ -1.76
SDP1	YIL113W	STE13	P33894	931 aa		4.07	□□□□□ -1.76
SDP1	YIL113W	TOM20	P35180	183 aa		4.07	□□□□□ -1.76
SDP1	YIL113W	YKR078W	P36158	585 aa	Known RBP	4.07	□□□□□ -1.76
SDP1	YIL113W	RNT1	Q02555	471 aa		4.07	□□□□□ -1.76
SDP1	YIL113W	OMS1	Q06668	471 aa		4.07	□□□□□ -1.76
SDP1	YIL113W	PIN2	Q12057	282 aa		4.07	□□□□□ -1.76
SDP1	YIL113W	AAR2	P32357	355 aa	Predicted RBP	4.06	□□□□□ -1.76
SDP1	YIL113W	YRO2	P38079	344 aa		4.06	□□□□□ -1.76
SDP1	YIL113W	YBR238C	P38330	731 aa	Known RBP	4.06	□□□□□ -1.76
SDP1	YIL113W	QRI1	P43123	477 aa	Known RBP	4.06	□□□□□ -1.76
SDP1	YIL113W	GND2	P53319	492 aa		4.06	□□□□□ -1.76
SDP1	YIL113W	RNH70	P53331	553 aa		4.06	□□□□□ -1.76
SDP1	YIL113W	SHE9	Q04172	456 aa		4.06	□□□□□ -1.76
SDP1	YIL113W	JIP5	Q06214	492 aa	Predicted RBP	4.06	□□□□□ -1.76
SDP1	YIL113W	PEX19	Q07418	342 aa		4.06	□□□□□ -1.76
SDP1	YIL113W	ACF2	Q12168	779 aa		4.06	□□□□□ -1.76
SDP1	YIL113W	PPR1	P07272	904 aa	Predicted RBP	4.05	□□□□□ -1.76
SDP1	YIL113W	FBP1	P09201	348 aa		4.05	□□□□□ -1.76
SDP1	YIL113W	CLN2	P20438	545 aa		4.05	□□□□□ -1.76
SDP1	YIL113W	MTH1	P35198	433 aa		4.05	□□□□□ -1.76
SDP1	YIL113W	RRP14	P36080	434 aa	Known RBP	4.05	□□□□□ -1.76
SDP1	YIL113W	STU2	P46675	888 aa		4.05	□□□□□ -1.76
SDP1	YIL113W	LGE1	Q02796	332 aa	Known RBP	4.05	□□□□□ -1.76
SDP1	YIL113W	IRC10	Q08118	586 aa		4.05	□□□□□ -1.76
SDP1	YIL113W	TUB3	P09734	445 aa	Known RBP	4.04	□□□□□ -1.76
SDP1	YIL113W	TSR4	P25040	408 aa		4.04	□□□□□ -1.76
SDP1	YIL113W	PPG1	P32838	368 aa		4.04	□□□□□ -1.76
SDP1	YIL113W	STE5	P32917	917 aa		4.04	□□□□□ -1.76
SDP1	YIL113W	PPS1	P38148	807 aa		4.04	□□□□□ -1.76
SDP1	YIL113W	FPR3	P38911	411 aa	Known RBP	4.04	□□□□□ -1.76
SDP1	YIL113W	SDP1	P40479	209 aa		4.04	□□□□□ -1.76
SDP1	YIL113W	YIL108W	P40483	696 aa	Known RBP	4.04	□□□□□ -1.76
SDP1	YIL113W	ADE8	P04161	214 aa		4.03	□□□□□ -1.76
SDP1	YIL113W	ATF1	P40353	525 aa		4.03	□□□□□ -1.76
SDP1	YIL113W	YFR016C	P43597	1233 aa	Known RBP	4.03	□□□□□ -1.76
SDP1	YIL113W	ZDS1	P50111	915 aa	Known RBP	4.03	□□□□□ -1.76
SDP1	YIL113W	HDA1	P53973	706 aa		4.03	□□□□□ -1.76
SDP1	YIL113W	BUL2	Q03758	920 aa	Known RBP	4.03	□□□□□ -1.76
SDP1	YIL113W	SVF1	Q05515	481 aa		4.03	□□□□□ -1.76
SDP1	YIL113W	CTF13	P35203	478 aa		4.02	□□□□□ -1.77
SDP1	YIL113W	TOK1	P40310	691 aa		4.02	□□□□□ -1.77
SDP1	YIL113W	CEP3	P40969	608 aa		4.02	□□□□□ -1.77
SDP1	YIL113W	MRPS35	P53292	345 aa		4.02	□□□□□ -1.77
SDP1	YIL113W	FRE5	Q08908	694 aa		4.02	□□□□□ -1.77
SDP1	YIL113W	YOL098C	Q12496	1037 aa		4.02	□□□□□ -1.77
SDP1	YIL113W	PRP4	P20053	465 aa	Known RBP	4.01	□□□□□ -1.77
SDP1	YIL113W	RFA1	P22336	621 aa	Known RBP	4.01	□□□□□ -1.77
SDP1	YIL113W	HBS1	P32769	611 aa	Known RBP	4.01	□□□□□ -1.77
SDP1	YIL113W	CTF8	P38877	133 aa		4.01	□□□□□ -1.77
SDP1	YIL113W	MRP8	P35719	219 aa		4	□□□□□ -1.77
SDP1	YIL113W	PBY1	P38254	753 aa		4	□□□□□ -1.77
SDP1	YIL113W	PMC1	P38929	1173 aa	Predicted RBP	4	□□□□□ -1.77
SDP1	YIL113W	VAC8	P39968	578 aa		4	□□□□□ -1.77
SDP1	YIL113W	TPM2	P40414	161 aa		4	□□□□□ -1.77
SDP1	YIL113W	FKH2	P41813	862 aa		4	□□□□□ -1.77
SDP1	YIL113W	ALD6	P54115	500 aa	Known RBP	4	□□□□□ -1.77
SDP1	YIL113W	TIM44	Q01852	431 aa		4	□□□□□ -1.77
SDP1	YIL113W	YKR011C	Q02209	353 aa		4	□□□□□ -1.77
SDP1	YIL113W	VPS30	Q02948	557 aa		4	□□□□□ -1.77
SDP1	YIL113W	SWM1	Q12379	170 aa		4	□□□□□ -1.77
SDP1	YIL113W	SSB1	P11484	613 aa	Known RBP	3.99	□□□□□ -1.77
SDP1	YIL113W	TYE7	P33122	291 aa	Predicted RBP	3.99	□□□□□ -1.77
SDP1	YIL113W	YBR284W	P38150	797 aa		3.99	□□□□□ -1.77
SDP1	YIL113W	YBR184W	P38299	523 aa		3.99	□□□□□ -1.77
SDP1	YIL113W	SIT1	P39980	628 aa		3.99	□□□□□ -1.77
SDP1	YIL113W	SPF1	P39986	1215 aa	Known RBP	3.99	□□□□□ -1.77
SDP1	YIL113W	SSB2	P40150	613 aa	Known RBP	3.99	□□□□□ -1.77
SDP1	YIL113W	ELO3	P40319	345 aa		3.99	□□□□□ -1.77
SDP1	YIL113W	SDS3	P40505	327 aa		3.99	□□□□□ -1.77
SDP1	YIL113W	TY4A-J	P47023	414 aa		3.99	□□□□□ -1.77
SDP1	YIL113W	YPR071W	Q12346	211 aa		3.99	□□□□□ -1.77
SDP1	YIL113W	TRM11	Q12463	433 aa		3.99	□□□□□ -1.77
SDP1	YIL113W	MET3	P08536	511 aa		3.98	□□□□□ -1.77
SDP1	YIL113W	GAL11	P19659	1081 aa		3.98	□□□□□ -1.77
SDP1	YIL113W	URA1	P28272	314 aa	Predicted RBP	3.98	□□□□□ -1.77
SDP1	YIL113W	PEX2	P32800	271 aa		3.98	□□□□□ -1.77
SDP1	YIL113W	PFD1	P46988	109 aa		3.98	□□□□□ -1.77
SDP1	YIL113W	MUP1	P50276	574 aa		3.98	□□□□□ -1.77
SDP1	YIL113W	ALG12	P53730	551 aa		3.98	□□□□□ -1.77
SDP1	YIL113W	BDF2	Q07442	638 aa		3.98	□□□□□ -1.77
SDP1	YIL113W	BRE1	Q07457	700 aa	Known RBP	3.98	□□□□□ -1.77
SDP1	YIL113W	YOL057W	Q08225	711 aa		3.98	□□□□□ -1.77
SDP1	YIL113W	MRH1	Q12117	320 aa	Predicted RBP	3.98	□□□□□ -1.77
SDP1	YIL113W	SUT2	Q12286	268 aa		3.98	□□□□□ -1.77
SDP1	YIL113W	HIF1	Q12373	385 aa		3.98	□□□□□ -1.77
SDP1	YIL113W	SRP40	P32583	406 aa	Predicted RBP	3.97	□□□□□ -1.77
SDP1	YIL113W	TOA1	P32773	286 aa		3.97	□□□□□ -1.77
SDP1	YIL113W	YKL091C	P33324	310 aa	Known RBP	3.97	□□□□□ -1.77
SDP1	YIL113W	CUE2	P36075	443 aa	Known RBP	3.97	□□□□□ -1.77
SDP1	YIL113W	RPP1	P38786	293 aa		3.97	□□□□□ -1.77
SDP1	YIL113W	YHR078W	P38799	552 aa		3.97	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 73.1 ms