RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W URM1P40554 99 aaPredicted RBP3.92□□□□□ -1.78
SSF1YHR066W GYP8P43570 497 aa3.92□□□□□ -1.78
SSF1YHR066W PSP2P50109 593 aaKnown RBP3.92□□□□□ -1.78
SSF1YHR066W HDA1P53973 706 aa3.92□□□□□ -1.78
SSF1YHR066W ORC1P54784 914 aaPredicted RBP3.92□□□□□ -1.78
SSF1YHR066W CLU1Q03690 1277 aaKnown RBP3.92□□□□□ -1.78
SSF1YHR066W PLB1P39105 664 aa3.91□□□□□ -1.78
SSF1YHR066W NUP82P40368 713 aa3.91□□□□□ -1.78
SSF1YHR066W MAL11P53048 616 aa3.91□□□□□ -1.78
SSF1YHR066W YGR283CP53336 341 aaPredicted RBP3.91□□□□□ -1.78
SSF1YHR066W FBP1P09201 348 aa3.9□□□□□ -1.78
SSF1YHR066W MPH2P0CD99 609 aa3.9□□□□□ -1.78
SSF1YHR066W RFA1P22336 621 aaKnown RBP3.9□□□□□ -1.78
SSF1YHR066W URA1P28272 314 aaPredicted RBP3.9□□□□□ -1.78
SSF1YHR066W SCT1P32784 759 aa3.9□□□□□ -1.78
SSF1YHR066W GDH3P39708 457 aa3.9□□□□□ -1.78
SSF1YHR066W CEP3P40969 608 aa3.9□□□□□ -1.78
SSF1YHR066W ALG2P43636 503 aa3.9□□□□□ -1.78
SSF1YHR066W NCS6P53088 359 aa3.9□□□□□ -1.78
SSF1YHR066W YKR011CQ02209 353 aa3.9□□□□□ -1.78
SSF1YHR066W TMA10Q06177 86 aa3.9□□□□□ -1.78
SSF1YHR066W UPC2Q12151 913 aa3.9□□□□□ -1.78
SSF1YHR066W KCS1Q12494 1050 aa3.9□□□□□ -1.78
SSF1YHR066W TUB2P02557 457 aaKnown RBP3.89□□□□□ -1.79
SSF1YHR066W CTS1P29029 562 aa3.89□□□□□ -1.79
SSF1YHR066W STE14P32584 239 aa3.89□□□□□ -1.79
SSF1YHR066W ATG19P35193 415 aa3.89□□□□□ -1.79
SSF1YHR066W EMC3P36039 253 aa3.89□□□□□ -1.79
SSF1YHR066W SHM2P37291 469 aaKnown RBP3.89□□□□□ -1.79
SSF1YHR066W TY4A-JP47023 414 aa3.89□□□□□ -1.79
SSF1YHR066W PNS1Q12412 539 aa3.89□□□□□ -1.79
SSF1YHR066W PHR1P05066 565 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
SSF1YHR066W TYE7P33122 291 aaPredicted RBP3.89□□□□□ -1.79
SSF1YHR066W MPT5P39016 859 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
SSF1YHR066W YIL108WP40483 696 aaKnown RBP3.89□□□□□ -1.79
SSF1YHR066W MCM6P53091 1017 aaKnown RBP3.89□□□□□ -1.79
SSF1YHR066W FPR4Q06205 392 aaPredicted RBP3.89□□□□□ -1.79
SSF1YHR066W NPC2Q12408 173 aa3.89□□□□□ -1.79
SSF1YHR066W RPP2AP05319 106 aaKnown RBP3.88□□□□□ -1.79
SSF1YHR066W PHO8P11491 566 aa3.88□□□□□ -1.79
SSF1YHR066W DAL7P21826 554 aa3.88□□□□□ -1.79
SSF1YHR066W STE11P23561 717 aa3.88□□□□□ -1.79
SSF1YHR066W YCL002CP25565 263 aa3.88□□□□□ -1.79
SSF1YHR066W SPC29P33419 253 aa3.88□□□□□ -1.79
SSF1YHR066W NIT3P49954 291 aa3.88□□□□□ -1.79
SSF1YHR066W HSV2P50079 448 aaPredicted RBP3.88□□□□□ -1.79
SSF1YHR066W MNN10P50108 393 aaKnown RBP3.88□□□□□ -1.79
SSF1YHR066W TAD1P53065 400 aa3.88□□□□□ -1.79
SSF1YHR066W VPS30Q02948 557 aa3.88□□□□□ -1.79
SSF1YHR066W LRS4Q04087 347 aaKnown RBP3.88□□□□□ -1.79
SSF1YHR066W RAD53P22216 821 aa3.87□□□□□ -1.79
SSF1YHR066W EXG2P52911 562 aa3.87□□□□□ -1.79
SSF1YHR066W DAM1P53267 343 aa3.87□□□□□ -1.79
SSF1YHR066W NOG2P53742 486 aaKnown RBP3.87□□□□□ -1.79
SSF1YHR066W SLU7Q02775 382 aaKnown RBP3.87□□□□□ -1.79
SSF1YHR066W ATP25Q03153 612 aa3.87□□□□□ -1.79
SSF1YHR066W MET7Q08645 548 aa3.87□□□□□ -1.79
SSF1YHR066W YLR125WQ12138 136 aa3.87□□□□□ -1.79
SSF1YHR066W LAS17Q12446 633 aa3.87□□□□□ -1.79
SSF1YHR066W RPS9AO13516 197 aaKnown RBP3.86□□□□□ -1.79
SSF1YHR066W SED4P25365 1065 aa3.86□□□□□ -1.79
SSF1YHR066W CYS3P31373 394 aaKnown RBP3.86□□□□□ -1.79
SSF1YHR066W CTF8P38877 133 aa3.86□□□□□ -1.79
SSF1YHR066W SDP1P40479 209 aa3.86□□□□□ -1.79
SSF1YHR066W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
SSF1YHR066W HAL9Q12180 1030 aa3.86□□□□□ -1.79
SSF1YHR066W KAR4P25583 335 aa3.85□□□□□ -1.79
SSF1YHR066W DCG1P32460 244 aa3.85□□□□□ -1.79
SSF1YHR066W OSW7P43611 510 aa3.85□□□□□ -1.79
SSF1YHR066W HXT16P47185 567 aa3.85□□□□□ -1.79
SSF1YHR066W PHO23P50947 330 aa3.85□□□□□ -1.79
SSF1YHR066W RNH70P53331 553 aa3.85□□□□□ -1.79
SSF1YHR066W YDR514CQ04408 483 aa3.85□□□□□ -1.79
SSF1YHR066W YOR022CQ12204 715 aa3.85□□□□□ -1.79
SSF1YHR066W MDM12Q92328 271 aa3.85□□□□□ -1.79
SSF1YHR066W MEF1P25039 761 aa3.84□□□□□ -1.79
SSF1YHR066W PER1P25625 357 aa3.84□□□□□ -1.79
SSF1YHR066W MSH2P25847 964 aa3.84□□□□□ -1.79
SSF1YHR066W SEC21P32074 935 aaKnown RBP3.84□□□□□ -1.79
SSF1YHR066W THI4P32318 326 aa3.84□□□□□ -1.79
SSF1YHR066W RSC3Q06639 885 aa3.84□□□□□ -1.79
SSF1YHR066W REH1Q06709 432 aa3.84□□□□□ -1.79
SSF1YHR066W PMA1P05030 918 aaKnown RBP3.83□□□□□ -1.8
SSF1YHR066W HCM1P25364 564 aa3.83□□□□□ -1.8
SSF1YHR066W MTC2P34246 357 aa3.83□□□□□ -1.8
SSF1YHR066W MSS4P38994 779 aa3.83□□□□□ -1.8
SSF1YHR066W PUS2P53167 370 aa3.83□□□□□ -1.8
SSF1YHR066W DUS1P53759 423 aaKnown RBP3.83□□□□□ -1.8
SSF1YHR066W GUP2Q08929 609 aa3.83□□□□□ -1.8
SSF1YHR066W NTO1Q12311 748 aa3.83□□□□□ -1.8
SSF1YHR066W YBR182C-AQ8TGU6 64 aa3.83□□□□□ -1.8
SSF1YHR066W PRC1P00729 532 aa3.82□□□□□ -1.8
SSF1YHR066W CDC9P04819 755 aa3.82□□□□□ -1.8
SSF1YHR066W MET6P05694 767 aaKnown RBP3.82□□□□□ -1.8
SSF1YHR066W TUB3P09734 445 aaKnown RBP3.82□□□□□ -1.8
SSF1YHR066W PRP4P20053 465 aaKnown RBP3.82□□□□□ -1.8
SSF1YHR066W YHR078WP38799 552 aa3.82□□□□□ -1.8
SSF1YHR066W BUL1P48524 976 aa3.82□□□□□ -1.8
SSF1YHR066W ALG12P53730 551 aa3.82□□□□□ -1.8
SSF1YHR066W YML122CQ03207 126 aa3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 37.1 ms