RNA–Protein interactions for RNA: YHR016C

YSC84, Transcript of Actin-binding protein, yeast

Gene YSC84, Length 1,407 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSC84	YHR016C	UGA4	P32837	571 aa		12.57	□□□□□ -0.4
YSC84	YHR016C	YIL089W	P40500	205 aa		12.57	□□□□□ -0.4
YSC84	YHR016C	AIM41	Q12032	185 aa		12.57	□□□□□ -0.4
YSC84	YHR016C	PRP22	P24384	1145 aa	Known RBP	12.56	□□□□□ -0.4
YSC84	YHR016C	YKL050C	P35736	922 aa		12.56	□□□□□ -0.4
YSC84	YHR016C	LCP5	P40079	357 aa	Predicted RBP	12.56	□□□□□ -0.4
YSC84	YHR016C	NMD5	P46970	1048 aa		12.56	□□□□□ -0.4
YSC84	YHR016C	YMR187C	Q03236	431 aa		12.56	□□□□□ -0.4
YSC84	YHR016C	SRD1	P09007	221 aa		12.55	□□□□□ -0.4
YSC84	YHR016C	SUP45	P12385	437 aa	Known RBP	12.55	□□□□□ -0.4
YSC84	YHR016C	PGM1	P33401	570 aa	Known RBP	12.55	□□□□□ -0.4
YSC84	YHR016C	PNT1	P38969	423 aa		12.55	□□□□□ -0.4
YSC84	YHR016C	LCB2	P40970	561 aa		12.55	□□□□□ -0.4
YSC84	YHR016C	USA1	Q03714	838 aa		12.55	□□□□□ -0.4
YSC84	YHR016C	TDA9	Q04545	1251 aa		12.55	□□□□□ -0.4
YSC84	YHR016C	PIG1	Q06216	648 aa		12.55	□□□□□ -0.4
YSC84	YHR016C	WHI4	Q07655	649 aa	Known RBP	12.55	□□□□□ -0.4
YSC84	YHR016C	YLR462W	O13556	202 aa		12.54	□□□□□ -0.4
YSC84	YHR016C	SWI6	P09959	803 aa		12.54	□□□□□ -0.4
YSC84	YHR016C	YHL049C	P38722	271 aa		12.54	□□□□□ -0.4
YSC84	YHR016C	TIF4631	P39935	952 aa	Known RBP	12.54	□□□□□ -0.4
YSC84	YHR016C	ACA1	P39970	489 aa		12.54	□□□□□ -0.4
YSC84	YHR016C	YEL075C	P39972	122 aa		12.54	□□□□□ -0.4
YSC84	YHR016C	YER189W	P40104	122 aa		12.54	□□□□□ -0.4
YSC84	YHR016C	SAP185	P40856	1058 aa		12.54	□□□□□ -0.4
YSC84	YHR016C	GPD2	P41911	440 aa	Known RBP	12.54	□□□□□ -0.4
YSC84	YHR016C	YFL064C	P43540	174 aa		12.54	□□□□□ -0.4
YSC84	YHR016C	BRO1	P48582	844 aa		12.54	□□□□□ -0.4
YSC84	YHR016C	RRT6	P53117	311 aa	Predicted RBP	12.54	□□□□□ -0.4
YSC84	YHR016C	JJJ1	P53863	590 aa		12.54	□□□□□ -0.4
YSC84	YHR016C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	12.54	□□□□□ -0.4	not detected
YSC84	YHR016C	CUR1	Q06469	252 aa		12.54	□□□□□ -0.4
YSC84	YHR016C	TYW1	Q08960	810 aa	Known RBP	12.54	□□□□□ -0.4
YSC84	YHR016C	YBL111C	Q3E7Y5	667 aa		12.54	□□□□□ -0.4
YSC84	YHR016C	PHO8	P11491	566 aa		12.54	□□□□□ -0.4
YSC84	YHR016C	CLN3	P13365	580 aa		12.54	□□□□□ -0.4
YSC84	YHR016C	PMR1	P13586	950 aa		12.54	□□□□□ -0.4
YSC84	YHR016C	ILV6	P25605	309 aa	Known RBP	12.54	□□□□□ -0.4
YSC84	YHR016C	YCR051W	P25631	222 aa		12.54	□□□□□ -0.4
YSC84	YHR016C	RAD54	P32863	898 aa		12.54	□□□□□ -0.4
YSC84	YHR016C	SMX2	P40204	77 aa	Known RBP	12.54	□□□□□ -0.4
YSC84	YHR016C	ARK1	P53974	638 aa		12.54	□□□□□ -0.4
YSC84	YHR016C	YML082W	Q04533	649 aa	Known RBP	12.54	□□□□□ -0.4
YSC84	YHR016C	RLP24	Q07915	199 aa	Known RBP	12.54	□□□□□ -0.4
YSC84	YHR016C	RPB2	P08518	1224 aa	Known RBP	12.53	□□□□□ -0.4
YSC84	YHR016C	ESS1	P22696	170 aa		12.53	□□□□□ -0.4
YSC84	YHR016C	PSE1	P32337	1089 aa	Known RBP	12.53	□□□□□ -0.4
YSC84	YHR016C	LOS1	P33418	1100 aa	Predicted RBP	12.53	□□□□□ -0.4
YSC84	YHR016C	TRZ1	P36159	838 aa	Predicted RBP	12.53	□□□□□ -0.4
YSC84	YHR016C	MMS21	P38632	267 aa		12.53	□□□□□ -0.4
YSC84	YHR016C	HIS2	P38635	335 aa		12.53	□□□□□ -0.4
YSC84	YHR016C	PSY2	P40164	858 aa		12.53	□□□□□ -0.4
YSC84	YHR016C	URB2	P47108	1174 aa		12.53	□□□□□ -0.4
YSC84	YHR016C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	12.52	□□□□□ -0.41	not detected
YSC84	YHR016C	ADH4	P10127	382 aa		12.52	□□□□□ -0.41
YSC84	YHR016C	CHS2	P14180	963 aa		12.52	□□□□□ -0.41
YSC84	YHR016C	SUV3	P32580	737 aa		12.52	□□□□□ -0.41
YSC84	YHR016C	SAK1	P38990	1142 aa		12.52	□□□□□ -0.41
YSC84	YHR016C	SOL4	P53315	255 aa		12.52	□□□□□ -0.41
YSC84	YHR016C	ALD6	P54115	500 aa	Known RBP	12.52	□□□□□ -0.41
YSC84	YHR016C	PNP1	Q05788	311 aa		12.52	□□□□□ -0.41
YSC84	YHR016C	FRA1	Q07825	749 aa		12.52	□□□□□ -0.41
YSC84	YHR016C	SEY1	Q99287	776 aa		12.52	□□□□□ -0.41
YSC84	YHR016C	SNF1	P06782	633 aa	Known RBP	12.51	□□□□□ -0.41
YSC84	YHR016C	ERG12	P07277	443 aa		12.51	□□□□□ -0.41
YSC84	YHR016C	YME1	P32795	747 aa		12.51	□□□□□ -0.41
YSC84	YHR016C	UBP11	P36026	717 aa		12.51	□□□□□ -0.41
YSC84	YHR016C	RRT2	P38332	387 aa		12.51	□□□□□ -0.41
YSC84	YHR016C	RPN3	P40016	523 aa	Known RBP	12.51	□□□□□ -0.41
YSC84	YHR016C	KAP123	P40069	1113 aa	Known RBP	12.51	□□□□□ -0.41
YSC84	YHR016C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	12.51	□□□□□ -0.41	not detected
YSC84	YHR016C	CNM67	P53865	581 aa	Known RBP	12.51	□□□□□ -0.41
YSC84	YHR016C	TIM8	P57744	87 aa		12.51	□□□□□ -0.41
YSC84	YHR016C	ADA2	Q02336	434 aa		12.51	□□□□□ -0.41
YSC84	YHR016C	UTP6	Q02354	440 aa	Known RBP	12.51	□□□□□ -0.41
YSC84	YHR016C	MTG1	Q03151	367 aa	Predicted RBP	12.51	□□□□□ -0.41
YSC84	YHR016C	YDR278C	Q05612	105 aa		12.51	□□□□□ -0.41
YSC84	YHR016C	KRS1	P15180	591 aa	Known RBP	12.5	□□□□□ -0.41
YSC84	YHR016C	KIP1	P28742	1111 aa		12.5	□□□□□ -0.41
YSC84	YHR016C	SEC21	P32074	935 aa	Known RBP	12.5	□□□□□ -0.41
YSC84	YHR016C	PLC1	P32383	869 aa		12.5	□□□□□ -0.41
YSC84	YHR016C	PDB1	P32473	366 aa	Known RBP	12.5	□□□□□ -0.41
YSC84	YHR016C	GCD6	P32501	712 aa	Known RBP	12.5	□□□□□ -0.41
YSC84	YHR016C	SQT1	P35184	431 aa		12.5	□□□□□ -0.41
YSC84	YHR016C	UBP13	P38187	747 aa		12.5	□□□□□ -0.41
YSC84	YHR016C	ECM2	P38241	364 aa	Known RBP	12.5	□□□□□ -0.41
YSC84	YHR016C	TAF9	Q05027	157 aa		12.5	□□□□□ -0.41
YSC84	YHR016C	ARG1	P22768	420 aa		12.49	□□□□□ -0.41
YSC84	YHR016C	SWE1	P32944	819 aa		12.49	□□□□□ -0.41
YSC84	YHR016C	EXO5	P38289	585 aa		12.49	□□□□□ -0.41
YSC84	YHR016C	SPC72	P39723	622 aa		12.49	□□□□□ -0.41
YSC84	YHR016C	ZPR1	P53303	486 aa	Known RBP	12.49	□□□□□ -0.41
YSC84	YHR016C	PEX29	Q03370	554 aa		12.49	□□□□□ -0.41
YSC84	YHR016C	SUB2	Q07478	446 aa	Known RBP	12.49	□□□□□ -0.41
YSC84	YHR016C	TAF10	Q12030	206 aa		12.49	□□□□□ -0.41
YSC84	YHR016C	HIF1	Q12373	385 aa		12.49	□□□□□ -0.41
YSC84	YHR016C	NCA2	Q12374	616 aa		12.49	□□□□□ -0.41
YSC84	YHR016C	JIP3	O13555	125 aa		12.48	□□□□□ -0.41
YSC84	YHR016C	ARD1	P07347	238 aa	Predicted RBP	12.48	□□□□□ -0.41
YSC84	YHR016C	EUG1	P32474	517 aa		12.48	□□□□□ -0.41

Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms