RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W MET5P47169 1442 aa4.97□□□□□ -1.61
PRE9YGR135W YRF1-4O13559 1382 aa4.97□□□□□ -1.61
PRE9YGR135W TRP3P00937 484 aa4.97□□□□□ -1.61
PRE9YGR135W GSY1P23337 708 aa4.97□□□□□ -1.61
PRE9YGR135W SYP1P25623 870 aaKnown RBP4.97□□□□□ -1.61
PRE9YGR135W CDC11P32458 415 aa4.97□□□□□ -1.61
PRE9YGR135W YBR284WP38150 797 aa4.97□□□□□ -1.61
PRE9YGR135W TOS1P38288 455 aa4.97□□□□□ -1.61
PRE9YGR135W MAL11P53048 616 aa4.97□□□□□ -1.61
PRE9YGR135W NKP1Q12493 238 aa4.97□□□□□ -1.61
PRE9YGR135W BCK1Q01389 1478 aa4.96□□□□□ -1.62
PRE9YGR135W ERS1P17261 260 aa4.96□□□□□ -1.62
PRE9YGR135W MEF1P25039 761 aa4.96□□□□□ -1.62
PRE9YGR135W PRD1P25375 712 aa4.96□□□□□ -1.62
PRE9YGR135W VBA3P25594 458 aa4.96□□□□□ -1.62
PRE9YGR135W NAM7P30771 971 aaKnown RBP4.96□□□□□ -1.62
PRE9YGR135W MKK2P32491 506 aa4.96□□□□□ -1.62
PRE9YGR135W ATG14P38270 344 aa4.96□□□□□ -1.62
PRE9YGR135W SPO74P45819 413 aa4.96□□□□□ -1.62
PRE9YGR135W PEX14P53112 341 aa4.96□□□□□ -1.62
PRE9YGR135W YGR130CP53278 816 aa4.96□□□□□ -1.62
PRE9YGR135W YRF1-1P0CX20 1796 aa4.96□□□□□ -1.62
PRE9YGR135W YRF1-5P0CX21 1796 aa4.96□□□□□ -1.62
PRE9YGR135W YRF1-8P0CX22 1796 aa4.96□□□□□ -1.62
PRE9YGR135W NUP188P52593 1655 aaKnown RBP4.96□□□□□ -1.62
PRE9YGR135W ATP4P05626 244 aa4.95□□□□□ -1.62
PRE9YGR135W SCP160P06105 1222 aaKnown RBP RIP-Chip data4.95□□□□□ -1.62not detected
PRE9YGR135W TOP3P13099 656 aa4.95□□□□□ -1.62
PRE9YGR135W PRP5P21372 849 aaPredicted RBP4.95□□□□□ -1.62
PRE9YGR135W LIP5P32875 414 aa4.95□□□□□ -1.62
PRE9YGR135W DOM34P33309 386 aa4.95□□□□□ -1.62
PRE9YGR135W TYS1P36421 394 aaKnown RBP4.95□□□□□ -1.62
PRE9YGR135W BAP2P38084 609 aa4.95□□□□□ -1.62
PRE9YGR135W RDH54P38086 958 aa4.95□□□□□ -1.62
PRE9YGR135W GPG1P53130 126 aa4.95□□□□□ -1.62
PRE9YGR135W YGR021WP53212 290 aa4.95□□□□□ -1.62
PRE9YGR135W HFD1Q04458 532 aa4.95□□□□□ -1.62
PRE9YGR135W AOS1Q06624 347 aa4.95□□□□□ -1.62
PRE9YGR135W YDR306CQ06640 478 aa4.95□□□□□ -1.62
PRE9YGR135W TRE2Q08693 809 aa4.95□□□□□ -1.62
PRE9YGR135W YLL054CQ12244 843 aa4.95□□□□□ -1.62
PRE9YGR135W MPD2Q99316 277 aa4.95□□□□□ -1.62
PRE9YGR135W RAD9P14737 1309 aa4.95□□□□□ -1.62
PRE9YGR135W CYC7P00045 113 aa4.94□□□□□ -1.62
PRE9YGR135W DBP5P20449 482 aaKnown RBP4.94□□□□□ -1.62
PRE9YGR135W MSB1P21339 1137 aaKnown RBP4.94□□□□□ -1.62
PRE9YGR135W RAD53P22216 821 aa4.94□□□□□ -1.62
PRE9YGR135W AAR2P32357 355 aaPredicted RBP4.94□□□□□ -1.62
PRE9YGR135W EUG1P32474 517 aa4.94□□□□□ -1.62
PRE9YGR135W PUB1P32588 453 aaKnown RBP RIP-Chip data4.94□□□□□ -1.62not detected
PRE9YGR135W HBS1P32769 611 aaKnown RBP4.94□□□□□ -1.62
PRE9YGR135W YBR071WP38243 211 aa4.94□□□□□ -1.62
PRE9YGR135W PEA2P40091 420 aa4.94□□□□□ -1.62
PRE9YGR135W AIM21P40563 679 aa4.94□□□□□ -1.62
PRE9YGR135W CNN1P43618 361 aa4.94□□□□□ -1.62
PRE9YGR135W GCV1P48015 400 aa4.94□□□□□ -1.62
PRE9YGR135W PIL1P53252 339 aaKnown RBP4.94□□□□□ -1.62
PRE9YGR135W COG6P53959 839 aa4.94□□□□□ -1.62
PRE9YGR135W RAT1Q02792 1006 aaKnown RBP4.94□□□□□ -1.62
PRE9YGR135W LCD1Q04377 747 aa4.94□□□□□ -1.62
PRE9YGR135W YMR074CQ04773 145 aa4.94□□□□□ -1.62
PRE9YGR135W RTT109Q07794 436 aa4.94□□□□□ -1.62
PRE9YGR135W YIG1Q08956 461 aa4.94□□□□□ -1.62
PRE9YGR135W YOR223WQ12015 292 aa4.94□□□□□ -1.62
PRE9YGR135W YPL066WQ12194 479 aa4.94□□□□□ -1.62
PRE9YGR135W MDM12Q92328 271 aa4.94□□□□□ -1.62
PRE9YGR135W PHR1P05066 565 aaKnown RBP RIP-Chip data4.93□□□□□ -1.62not detected
PRE9YGR135W MTC2P34246 357 aa4.93□□□□□ -1.62
PRE9YGR135W EXO5P38289 585 aa4.93□□□□□ -1.62
PRE9YGR135W SAH1P39954 449 aaKnown RBP4.93□□□□□ -1.62
PRE9YGR135W RRT14P40470 206 aa4.93□□□□□ -1.62
PRE9YGR135W RSC1P53236 928 aa4.93□□□□□ -1.62
PRE9YGR135W COG4Q06096 861 aa4.93□□□□□ -1.62
PRE9YGR135W YPR071WQ12346 211 aa4.93□□□□□ -1.62
PRE9YGR135W ROM2P51862 1356 aaKnown RBP4.92□□□□□ -1.62
PRE9YGR135W SST2P11972 698 aaKnown RBP4.92□□□□□ -1.62
PRE9YGR135W PPH3P32345 308 aa4.92□□□□□ -1.62
PRE9YGR135W TFC4P33339 1025 aa4.92□□□□□ -1.62
PRE9YGR135W ADD66P36040 267 aa4.92□□□□□ -1.62
PRE9YGR135W GPP1P41277 250 aaKnown RBP4.92□□□□□ -1.62
PRE9YGR135W SEC26P41810 973 aaKnown RBP4.92□□□□□ -1.62
PRE9YGR135W UBP6P43593 499 aaKnown RBP4.92□□□□□ -1.62
PRE9YGR135W TY4A-JP47023 414 aa4.92□□□□□ -1.62
PRE9YGR135W YNR063WP53749 607 aa4.92□□□□□ -1.62
PRE9YGR135W MDG1P53885 366 aa4.92□□□□□ -1.62
PRE9YGR135W COG8Q04632 607 aa4.92□□□□□ -1.62
PRE9YGR135W BRE4Q07660 1125 aa4.92□□□□□ -1.62
PRE9YGR135W YLR001CQ07895 862 aa4.92□□□□□ -1.62
PRE9YGR135W RAD18P10862 487 aa4.91□□□□□ -1.62
PRE9YGR135W MSD1P15179 658 aaKnown RBP4.91□□□□□ -1.62
PRE9YGR135W RKM3P38222 552 aa4.91□□□□□ -1.62
PRE9YGR135W NOC2P39744 710 aaKnown RBP4.91□□□□□ -1.62
PRE9YGR135W HNT2P49775 206 aa4.91□□□□□ -1.62
PRE9YGR135W YNL034WP53963 612 aa4.91□□□□□ -1.62
PRE9YGR135W YNL018CP53976 612 aa4.91□□□□□ -1.62
PRE9YGR135W TAP42Q04372 366 aa4.91□□□□□ -1.62
PRE9YGR135W HTS1P07263 546 aaKnown RBP4.9□□□□□ -1.63
PRE9YGR135W TY1A-LR4P0C2I8 440 aaKnown RBP4.9□□□□□ -1.63
PRE9YGR135W TY1A-DR6P0CX70 440 aa4.9□□□□□ -1.63
PRE9YGR135W TY1A-ER1P0CX71 440 aa4.9□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms