RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeast

Gene VMA21, Length 234 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA21	YGR105W	IOC3	P43596	787 aa		4.6	□□□□□ -1.67
VMA21	YGR105W	HDA1	P53973	706 aa		4.6	□□□□□ -1.67
VMA21	YGR105W	VPS30	Q02948	557 aa		4.6	□□□□□ -1.67
VMA21	YGR105W	NSE3	Q05541	303 aa		4.6	□□□□□ -1.67
VMA21	YGR105W	ENV7	Q12003	364 aa		4.6	□□□□□ -1.67
VMA21	YGR105W	CDC53	Q12018	815 aa	Known RBP	4.6	□□□□□ -1.67
VMA21	YGR105W	KAR4	P25583	335 aa		4.59	□□□□□ -1.67
VMA21	YGR105W	UBP6	P43593	499 aa	Known RBP	4.59	□□□□□ -1.67
VMA21	YGR105W	RTA1	P53047	317 aa		4.59	□□□□□ -1.67
VMA21	YGR105W	LAS17	Q12446	633 aa		4.59	□□□□□ -1.67
VMA21	YGR105W	CAN1	P04817	590 aa		4.58	□□□□□ -1.68
VMA21	YGR105W	TOM70	P07213	617 aa	Known RBP	4.58	□□□□□ -1.68
VMA21	YGR105W	PFK1	P16861	987 aa	Known RBP	4.58	□□□□□ -1.68
VMA21	YGR105W	CAD1	P24813	409 aa	Known RBP	4.58	□□□□□ -1.68
VMA21	YGR105W	URA1	P28272	314 aa	Predicted RBP	4.58	□□□□□ -1.68
VMA21	YGR105W	TYE7	P33122	291 aa	Predicted RBP	4.58	□□□□□ -1.68
VMA21	YGR105W	SUN4	P53616	420 aa		4.58	□□□□□ -1.68
VMA21	YGR105W	YKR011C	Q02209	353 aa		4.58	□□□□□ -1.68
VMA21	YGR105W	RPS9A	O13516	197 aa	Known RBP	4.57	□□□□□ -1.68
VMA21	YGR105W	FBP1	P09201	348 aa		4.57	□□□□□ -1.68
VMA21	YGR105W	MPH2	P0CD99	609 aa		4.57	□□□□□ -1.68
VMA21	YGR105W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
VMA21	YGR105W	GSF2	Q04697	403 aa	Known RBP	4.57	□□□□□ -1.68
VMA21	YGR105W	YOL098C	Q12496	1037 aa		4.57	□□□□□ -1.68
VMA21	YGR105W	PMI40	P29952	429 aa	Known RBP	4.56	□□□□□ -1.68
VMA21	YGR105W	SRP40	P32583	406 aa	Predicted RBP	4.56	□□□□□ -1.68
VMA21	YGR105W	SCT1	P32784	759 aa		4.56	□□□□□ -1.68
VMA21	YGR105W	DEF1	P35732	738 aa	Known RBP	4.56	□□□□□ -1.68
VMA21	YGR105W	SDP1	P40479	209 aa		4.56	□□□□□ -1.68
VMA21	YGR105W	GYP8	P43570	497 aa		4.56	□□□□□ -1.68
VMA21	YGR105W	MSE1	P48525	536 aa		4.56	□□□□□ -1.68
VMA21	YGR105W	SLU7	Q02775	382 aa	Known RBP	4.56	□□□□□ -1.68
VMA21	YGR105W	PUS9	Q12069	462 aa		4.56	□□□□□ -1.68
VMA21	YGR105W	GAL11	P19659	1081 aa		4.55	□□□□□ -1.68
VMA21	YGR105W	DAL7	P21826	554 aa		4.55	□□□□□ -1.68
VMA21	YGR105W	GGA2	P38817	585 aa	Known RBP	4.55	□□□□□ -1.68
VMA21	YGR105W	MSS4	P38994	779 aa		4.55	□□□□□ -1.68
VMA21	YGR105W	NIT3	P49954	291 aa		4.55	□□□□□ -1.68
VMA21	YGR105W	ENB1	Q08299	606 aa		4.55	□□□□□ -1.68
VMA21	YGR105W	GUP2	Q08929	609 aa		4.55	□□□□□ -1.68
VMA21	YGR105W	YCL002C	P25565	263 aa		4.54	□□□□□ -1.68
VMA21	YGR105W	HRR25	P29295	494 aa	Known RBP	4.54	□□□□□ -1.68
VMA21	YGR105W	CYS3	P31373	394 aa	Known RBP	4.54	□□□□□ -1.68
VMA21	YGR105W	SEC21	P32074	935 aa	Known RBP	4.54	□□□□□ -1.68
VMA21	YGR105W	OCA5	P38738	679 aa		4.54	□□□□□ -1.68
VMA21	YGR105W	CTF8	P38877	133 aa		4.54	□□□□□ -1.68
VMA21	YGR105W	AIM21	P40563	679 aa		4.54	□□□□□ -1.68
VMA21	YGR105W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
VMA21	YGR105W	PUS2	P53167	370 aa		4.54	□□□□□ -1.68
VMA21	YGR105W	YGR283C	P53336	341 aa	Predicted RBP	4.54	□□□□□ -1.68
VMA21	YGR105W	KIN4	Q01919	800 aa		4.54	□□□□□ -1.68
VMA21	YGR105W	AIM39	Q08223	395 aa		4.54	□□□□□ -1.68
VMA21	YGR105W	PNS1	Q12412	539 aa		4.54	□□□□□ -1.68
VMA21	YGR105W	YOR131C	Q12486	218 aa		4.54	□□□□□ -1.68
VMA21	YGR105W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
VMA21	YGR105W	YKL091C	P33324	310 aa	Known RBP	4.53	□□□□□ -1.68
VMA21	YGR105W	EMC3	P36039	253 aa		4.53	□□□□□ -1.68
VMA21	YGR105W	ALG2	P43636	503 aa		4.53	□□□□□ -1.68
VMA21	YGR105W	TAD1	P53065	400 aa		4.53	□□□□□ -1.68
VMA21	YGR105W	NOG2	P53742	486 aa	Known RBP	4.53	□□□□□ -1.68
VMA21	YGR105W	LRS4	Q04087	347 aa	Known RBP	4.53	□□□□□ -1.68
VMA21	YGR105W	PPM2	Q08282	695 aa		4.53	□□□□□ -1.68
VMA21	YGR105W	HAL9	Q12180	1030 aa		4.53	□□□□□ -1.68
VMA21	YGR105W	ERR1	P0CX10	437 aa		4.52	□□□□□ -1.69
VMA21	YGR105W	ERR2	P0CX11	437 aa		4.52	□□□□□ -1.69
VMA21	YGR105W	BUL1	P48524	976 aa		4.52	□□□□□ -1.69
VMA21	YGR105W	PEX19	Q07418	342 aa		4.52	□□□□□ -1.69
VMA21	YGR105W	YOR022C	Q12204	715 aa		4.52	□□□□□ -1.69
VMA21	YGR105W	TUB3	P09734	445 aa	Known RBP	4.51	□□□□□ -1.69
VMA21	YGR105W	YHR078W	P38799	552 aa		4.51	□□□□□ -1.69
VMA21	YGR105W	DAM1	P53267	343 aa		4.51	□□□□□ -1.69
VMA21	YGR105W	SLI1	P53304	468 aa		4.51	□□□□□ -1.69
VMA21	YGR105W	DUS1	P53759	423 aa	Known RBP	4.51	□□□□□ -1.69
VMA21	YGR105W	SWM1	Q12379	170 aa		4.51	□□□□□ -1.69
VMA21	YGR105W	EFT1	P32324	842 aa	Known RBP	4.5	□□□□□ -1.69
VMA21	YGR105W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
VMA21	YGR105W	CHZ1	P40019	153 aa	Predicted RBP	4.5	□□□□□ -1.69
VMA21	YGR105W	ERG5	P54781	538 aa		4.5	□□□□□ -1.69
VMA21	YGR105W	RPN4	Q03465	531 aa		4.5	□□□□□ -1.69
VMA21	YGR105W	YDR514C	Q04408	483 aa		4.5	□□□□□ -1.69
VMA21	YGR105W	MET7	Q08645	548 aa		4.5	□□□□□ -1.69
VMA21	YGR105W	PRC1	P00729	532 aa		4.49	□□□□□ -1.69
VMA21	YGR105W	TRP4	P07285	380 aa	Predicted RBP	4.49	□□□□□ -1.69
VMA21	YGR105W	PRP4	P20053	465 aa	Known RBP	4.49	□□□□□ -1.69
VMA21	YGR105W	TIM23	P32897	222 aa		4.49	□□□□□ -1.69
VMA21	YGR105W	SAP190	P36123	1033 aa		4.49	□□□□□ -1.69
VMA21	YGR105W	CHS7	P38843	316 aa		4.49	□□□□□ -1.69
VMA21	YGR105W	GDH3	P39708	457 aa		4.49	□□□□□ -1.69
VMA21	YGR105W	VHR1	P40522	640 aa		4.49	□□□□□ -1.69
VMA21	YGR105W	TY4A-J	P47023	414 aa		4.49	□□□□□ -1.69
VMA21	YGR105W	YLR040C	Q07988	224 aa		4.49	□□□□□ -1.69
VMA21	YGR105W	TRM13	Q12383	476 aa		4.49	□□□□□ -1.69
VMA21	YGR105W	RAD53	P22216	821 aa		4.48	□□□□□ -1.69
VMA21	YGR105W	ERG4	P25340	473 aa		4.48	□□□□□ -1.69
VMA21	YGR105W	PER1	P25625	357 aa		4.48	□□□□□ -1.69
VMA21	YGR105W	SPC29	P33419	253 aa		4.48	□□□□□ -1.69
VMA21	YGR105W	SUL1	P38359	859 aa		4.48	□□□□□ -1.69
VMA21	YGR105W	BUD6	P41697	788 aa		4.48	□□□□□ -1.69
VMA21	YGR105W	URN1	Q06525	465 aa	Known RBP	4.48	□□□□□ -1.69
VMA21	YGR105W	REH1	Q06709	432 aa		4.48	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms