RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W STI1P15705 589 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
RPN9YDR427W AFR1P33304 620 aa5.32□□□□□ -1.56
RPN9YDR427W TIM54P47045 478 aa5.32□□□□□ -1.56
RPN9YDR427W GYP7P48365 746 aa5.32□□□□□ -1.56
RPN9YDR427W ERP6P53198 216 aa5.32□□□□□ -1.56
RPN9YDR427W WHI4Q07655 649 aaKnown RBP5.32□□□□□ -1.56
RPN9YDR427W CIT1P00890 479 aa5.31□□□□□ -1.56
RPN9YDR427W YKR078WP36158 585 aaKnown RBP5.31□□□□□ -1.56
RPN9YDR427W YBR238CP38330 731 aaKnown RBP5.31□□□□□ -1.56
RPN9YDR427W ALR2P43553 858 aa5.31□□□□□ -1.56
RPN9YDR427W SFB2P53953 876 aa5.31□□□□□ -1.56
RPN9YDR427W BUL2Q03758 920 aaKnown RBP5.31□□□□□ -1.56
RPN9YDR427W EAF1Q06337 982 aa5.31□□□□□ -1.56
RPN9YDR427W OSH2Q12451 1283 aa5.31□□□□□ -1.56
RPN9YDR427W HSP60P19882 572 aaKnown RBP5.3□□□□□ -1.56
RPN9YDR427W NPP1P25353 742 aa5.3□□□□□ -1.56
RPN9YDR427W RPC82P32349 654 aa5.3□□□□□ -1.56
RPN9YDR427W AAR2P32357 355 aaPredicted RBP5.3□□□□□ -1.56
RPN9YDR427W YKE2P52553 114 aa5.3□□□□□ -1.56
RPN9YDR427W UBX5Q06682 500 aa5.3□□□□□ -1.56
RPN9YDR427W FLC1Q08967 793 aa5.3□□□□□ -1.56
RPN9YDR427W HBN1Q96VH4 193 aa5.3□□□□□ -1.56
RPN9YDR427W ADE8P04161 214 aa5.29□□□□□ -1.56
RPN9YDR427W PPR1P07272 904 aaPredicted RBP5.29□□□□□ -1.56
RPN9YDR427W MTH1P35198 433 aa5.29□□□□□ -1.56
RPN9YDR427W TSL1P38427 1098 aaKnown RBP5.29□□□□□ -1.56
RPN9YDR427W RSP5P39940 809 aaKnown RBP5.29□□□□□ -1.56
RPN9YDR427W YGR125WP53273 1036 aa5.29□□□□□ -1.56
RPN9YDR427W TPO2P53283 614 aa5.29□□□□□ -1.56
RPN9YDR427W TAF8Q03750 510 aa5.29□□□□□ -1.56
RPN9YDR427W UPC2Q12151 913 aa5.29□□□□□ -1.56
RPN9YDR427W SED4P25365 1065 aa5.28□□□□□ -1.56
RPN9YDR427W ARE1P25628 610 aa5.28□□□□□ -1.56
RPN9YDR427W PPH3P32345 308 aa5.28□□□□□ -1.56
RPN9YDR427W SCT1P32784 759 aa5.28□□□□□ -1.56
RPN9YDR427W SPC42P36094 363 aa5.28□□□□□ -1.56
RPN9YDR427W YER158CP40095 573 aa5.28□□□□□ -1.56
RPN9YDR427W GND2P53319 492 aa5.28□□□□□ -1.56
RPN9YDR427W RPN4Q03465 531 aa5.28□□□□□ -1.56
RPN9YDR427W CDC53Q12018 815 aaKnown RBP5.28□□□□□ -1.56
RPN9YDR427W NDJ1Q12366 352 aa5.28□□□□□ -1.56
RPN9YDR427W ALG7P07286 448 aa5.27□□□□□ -1.57
RPN9YDR427W CDC11P32458 415 aa5.27□□□□□ -1.57
RPN9YDR427W SRP40P32583 406 aaPredicted RBP5.27□□□□□ -1.57
RPN9YDR427W YRO2P38079 344 aa5.27□□□□□ -1.57
RPN9YDR427W HBT1Q07653 1046 aaKnown RBP5.27□□□□□ -1.57
RPN9YDR427W YTA7P40340 1379 aa5.27□□□□□ -1.57
RPN9YDR427W PET10P36139 283 aa5.26□□□□□ -1.57
RPN9YDR427W GGA2P38817 585 aaKnown RBP5.26□□□□□ -1.57
RPN9YDR427W BUD6P41697 788 aa5.26□□□□□ -1.57
RPN9YDR427W MUK1Q02866 612 aa5.26□□□□□ -1.57
RPN9YDR427W LCD1Q04377 747 aa5.26□□□□□ -1.57
RPN9YDR427W CAN1P04817 590 aa5.25□□□□□ -1.57
RPN9YDR427W CDC48P25694 835 aaKnown RBP5.25□□□□□ -1.57
RPN9YDR427W YBR284WP38150 797 aa5.25□□□□□ -1.57
RPN9YDR427W TOK1P40310 691 aa5.25□□□□□ -1.57
RPN9YDR427W RTA1P53047 317 aa5.25□□□□□ -1.57
RPN9YDR427W YPR071WQ12346 211 aa5.25□□□□□ -1.57
RPN9YDR427W TOP3P13099 656 aa5.24□□□□□ -1.57
RPN9YDR427W MSD1P15179 658 aaKnown RBP5.24□□□□□ -1.57
RPN9YDR427W YKL091CP33324 310 aaKnown RBP5.24□□□□□ -1.57
RPN9YDR427W BET3P36149 193 aa5.24□□□□□ -1.57
RPN9YDR427W ERT1P38140 529 aa5.24□□□□□ -1.57
RPN9YDR427W HUL4P40985 892 aa5.24□□□□□ -1.57
RPN9YDR427W CCM1P48237 864 aaPredicted RBP5.24□□□□□ -1.57
RPN9YDR427W ORC1P54784 914 aaPredicted RBP5.24□□□□□ -1.57
RPN9YDR427W GAL11P19659 1081 aa5.23□□□□□ -1.57
RPN9YDR427W PBP2P38151 413 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
RPN9YDR427W CHZ1P40019 153 aaPredicted RBP5.23□□□□□ -1.57
RPN9YDR427W UBP6P43593 499 aaKnown RBP5.23□□□□□ -1.57
RPN9YDR427W YPR196WQ06595 470 aa5.23□□□□□ -1.57
RPN9YDR427W YDL124WQ07551 312 aaKnown RBP5.23□□□□□ -1.57
RPN9YDR427W YOR131CQ12486 218 aa5.23□□□□□ -1.57
RPN9YDR427W REC104P33323 182 aa5.22□□□□□ -1.57
RPN9YDR427W SDS3P40505 327 aa5.22□□□□□ -1.57
RPN9YDR427W RAI1P53063 387 aaKnown RBP5.22□□□□□ -1.57
RPN9YDR427W CIT2P08679 460 aa5.21□□□□□ -1.58
RPN9YDR427W STE14P32584 239 aa5.21□□□□□ -1.58
RPN9YDR427W DAS1P47005 663 aa5.21□□□□□ -1.58
RPN9YDR427W FPR4Q06205 392 aaPredicted RBP5.21□□□□□ -1.58
RPN9YDR427W TRM13Q12383 476 aa5.2□□□□□ -1.58
RPN9YDR427W NOT3P06102 836 aaKnown RBP5.19□□□□□ -1.58
RPN9YDR427W YHL017WP38745 532 aa5.19□□□□□ -1.58
RPN9YDR427W PEX19Q07418 342 aa5.19□□□□□ -1.58
RPN9YDR427W ENV7Q12003 364 aa5.19□□□□□ -1.58
RPN9YDR427W MET3P08536 511 aa5.18□□□□□ -1.58
RPN9YDR427W ERR1P0CX10 437 aa5.18□□□□□ -1.58
RPN9YDR427W ERR2P0CX11 437 aa5.18□□□□□ -1.58
RPN9YDR427W PEX2P32800 271 aa5.18□□□□□ -1.58
RPN9YDR427W STE13P33894 931 aa5.18□□□□□ -1.58
RPN9YDR427W ERG5P54781 538 aa5.18□□□□□ -1.58
RPN9YDR427W SSL1Q04673 461 aaPredicted RBP5.18□□□□□ -1.58
RPN9YDR427W FRE5Q08908 694 aa5.18□□□□□ -1.58
RPN9YDR427W TOM70P07213 617 aaKnown RBP5.17□□□□□ -1.58
RPN9YDR427W FBP1P09201 348 aa5.17□□□□□ -1.58
RPN9YDR427W TIM23P32897 222 aa5.17□□□□□ -1.58
RPN9YDR427W NUP82P40368 713 aa5.17□□□□□ -1.58
RPN9YDR427W YGR283CP53336 341 aaPredicted RBP5.17□□□□□ -1.58
RPN9YDR427W HDA1P53973 706 aa5.17□□□□□ -1.58
RPN9YDR427W SLU7Q02775 382 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 75.1 ms