RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W SKY1Q03656 742 aa1.86□□□□□ -2.11
CFT1YDR301W EIS1Q05050 843 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W NOB1Q08444 459 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W APC5Q08683 685 aa1.86□□□□□ -2.11
CFT1YDR301W SGT2Q12118 346 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W YDL206WQ12424 762 aa1.86□□□□□ -2.11
CFT1YDR301W DED1P06634 604 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W VMA1P17255 1071 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W NAM7P30771 971 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W MSS51P32335 436 aa1.86□□□□□ -2.11
CFT1YDR301W PEP7P32609 515 aa1.86□□□□□ -2.11
CFT1YDR301W SHP1P34223 423 aa1.86□□□□□ -2.11
CFT1YDR301W UBP13P38187 747 aa1.86□□□□□ -2.11
CFT1YDR301W MMS21P38632 267 aa1.86□□□□□ -2.11
CFT1YDR301W MIP6P38760 659 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W NOC2P39744 710 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W AFG3P39925 761 aa1.86□□□□□ -2.11
CFT1YDR301W UBP15P50101 1230 aa1.86□□□□□ -2.11
CFT1YDR301W GUP1P53154 560 aa1.86□□□□□ -2.11
CFT1YDR301W TAM41P53230 385 aa1.86□□□□□ -2.11
CFT1YDR301W RSC1P53236 928 aa1.86□□□□□ -2.11
CFT1YDR301W VPS75P53853 264 aa1.86□□□□□ -2.11
CFT1YDR301W PGA2P53903 129 aa1.86□□□□□ -2.11
CFT1YDR301W YNL108CP53929 270 aa1.86□□□□□ -2.11
CFT1YDR301W RPA49Q01080 415 aaPredicted RBP1.86□□□□□ -2.11
CFT1YDR301W ULP1Q02724 621 aa1.86□□□□□ -2.11
CFT1YDR301W YPL034WQ03083 165 aa1.86□□□□□ -2.11
CFT1YDR301W MSC2Q03455 724 aa1.86□□□□□ -2.11
CFT1YDR301W EBS1Q03466 884 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W PPM1Q04081 328 aa1.86□□□□□ -2.11
CFT1YDR301W CRD1Q07560 283 aa1.86□□□□□ -2.11
CFT1YDR301W YAP7Q08182 245 aa1.86□□□□□ -2.11
CFT1YDR301W MSC6Q08818 692 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W SSB1P11484 613 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W SMY2P32909 740 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W DUR3P33413 735 aa1.86□□□□□ -2.11
CFT1YDR301W YKL023WP36103 277 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W YMC2P38087 329 aa1.86□□□□□ -2.11
CFT1YDR301W VFA1P40080 203 aa1.86□□□□□ -2.11
CFT1YDR301W FTR1P40088 404 aa1.86□□□□□ -2.11
CFT1YDR301W SSB2P40150 613 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W DJP1P40564 432 aa1.86□□□□□ -2.11
CFT1YDR301W STR2P47164 639 aa1.86□□□□□ -2.11
CFT1YDR301W MNP1P53163 194 aaPredicted RBP1.86□□□□□ -2.11
CFT1YDR301W CUL3P53202 744 aa1.86□□□□□ -2.11
CFT1YDR301W YNL146WP53906 100 aa1.86□□□□□ -2.11
CFT1YDR301W RPL22BP56628 122 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W VTC3Q02725 835 aa1.86□□□□□ -2.11
CFT1YDR301W YLR297WQ05899 129 aa1.86□□□□□ -2.11
CFT1YDR301W UTP13Q05946 817 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W SMD2Q06217 110 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W TSR1Q07381 788 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W SAM3Q08986 587 aa1.86□□□□□ -2.11
CFT1YDR301W SPE3Q12074 293 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W RKM4Q12504 494 aa1.86□□□□□ -2.11
CFT1YDR301W PDC1P06169 563 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W SNF1P06782 633 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W SUP45P12385 437 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W DBP5P20449 482 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W MRC1P25588 1096 aa1.86□□□□□ -2.11
CFT1YDR301W KIP1P28742 1111 aa1.86□□□□□ -2.11
CFT1YDR301W YKL091CP33324 310 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W PIH1P38768 344 aa1.86□□□□□ -2.11
CFT1YDR301W YJL049WP47048 450 aa1.86□□□□□ -2.11
CFT1YDR301W ATG1P53104 897 aa1.86□□□□□ -2.11
CFT1YDR301W YGL039WP53183 348 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W SGD1Q06132 899 aa1.86□□□□□ -2.11
CFT1YDR301W SPP382Q06411 708 aaPredicted RBP1.86□□□□□ -2.11
CFT1YDR301W CSR1Q06705 408 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W DAS2Q12084 232 aa1.86□□□□□ -2.11
CFT1YDR301W COX4P04037 155 aa1.85□□□□□ -2.11
CFT1YDR301W ADE3P07245 946 aaKnown RBP1.85□□□□□ -2.11
CFT1YDR301W CDC42P19073 191 aa1.85□□□□□ -2.11
CFT1YDR301W IRE1P32361 1115 aa1.85□□□□□ -2.11
CFT1YDR301W XRS2P33301 854 aa1.85□□□□□ -2.11
CFT1YDR301W FLR1P38124 548 aa1.85□□□□□ -2.11
CFT1YDR301W MMS4P38257 691 aa1.85□□□□□ -2.11
CFT1YDR301W SLX1P38324 304 aa1.85□□□□□ -2.11
CFT1YDR301W SKP2P42843 763 aa1.85□□□□□ -2.11
CFT1YDR301W STU2P46675 888 aa1.85□□□□□ -2.11
CFT1YDR301W YJL045WP47052 634 aa1.85□□□□□ -2.11
CFT1YDR301W YJR107WP47145 328 aa1.85□□□□□ -2.11
CFT1YDR301W CCM1P48237 864 aaPredicted RBP1.85□□□□□ -2.11
CFT1YDR301W SCS3P53012 380 aa1.85□□□□□ -2.11
CFT1YDR301W MAL13P53338 473 aa1.85□□□□□ -2.11
CFT1YDR301W EAR1Q03212 550 aa1.85□□□□□ -2.11
CFT1YDR301W HCR1Q05775 265 aaKnown RBP1.85□□□□□ -2.11
CFT1YDR301W YOR238WQ08634 303 aa1.85□□□□□ -2.11
CFT1YDR301W TRS33Q99394 268 aa1.85□□□□□ -2.11
CFT1YDR301W TUF1P02992 437 aaKnown RBP1.85□□□□□ -2.11
CFT1YDR301W PET111P08468 800 aa1.85□□□□□ -2.11
CFT1YDR301W DBP1P24784 617 aaKnown RBP1.85□□□□□ -2.11
CFT1YDR301W DID4P36108 232 aa1.85□□□□□ -2.11
CFT1YDR301W TDA3P38758 523 aa1.85□□□□□ -2.11
CFT1YDR301W ORC6P38826 435 aa1.85□□□□□ -2.11
CFT1YDR301W YER186CP40101 306 aa1.85□□□□□ -2.11
CFT1YDR301W TGL3P40308 642 aa1.85□□□□□ -2.11
CFT1YDR301W PSF2P40359 213 aa1.85□□□□□ -2.11
CFT1YDR301W PHO86P46956 311 aa1.85□□□□□ -2.11
CFT1YDR301W SMC3P47037 1230 aa1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms