RNA–Protein interactions for RNA: YDR075W

PPH3, Transcript of Catalytic subunit of protein phosphatase PP4 complex, yeast

Gene PPH3, Length 927 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PPH3	YDR075W	TY1B-OL	Q12273	1755 aa		4.66	□□□□□ -1.66
PPH3	YDR075W	TY1B-PL	Q12414	1755 aa	Known RBP	4.66	□□□□□ -1.66
PPH3	YDR075W	TY1B-DR3	Q99231	1755 aa		4.66	□□□□□ -1.66
PPH3	YDR075W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
PPH3	YDR075W	OYE2	Q03558	400 aa	Known RBP	4.66	□□□□□ -1.66
PPH3	YDR075W	VPS15	P22219	1454 aa		4.66	□□□□□ -1.66
PPH3	YDR075W	MMS1	Q06211	1407 aa		4.65	□□□□□ -1.66
PPH3	YDR075W	ESC1	Q03661	1658 aa	Known RBP	4.65	□□□□□ -1.66
PPH3	YDR075W	CAD1	P24813	409 aa	Known RBP	4.65	□□□□□ -1.67
PPH3	YDR075W	NPP2	P39997	493 aa		4.65	□□□□□ -1.67
PPH3	YDR075W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
PPH3	YDR075W	ERG4	P25340	473 aa		4.64	□□□□□ -1.67
PPH3	YDR075W	MNR2	P35724	969 aa		4.64	□□□□□ -1.67
PPH3	YDR075W	SFB2	P53953	876 aa		4.64	□□□□□ -1.67
PPH3	YDR075W	TMN2	Q04562	672 aa		4.64	□□□□□ -1.67
PPH3	YDR075W	UPC2	Q12151	913 aa		4.64	□□□□□ -1.67
PPH3	YDR075W	BNI1	P41832	1953 aa		4.64	□□□□□ -1.67
PPH3	YDR075W	RPC82	P32349	654 aa		4.63	□□□□□ -1.67
PPH3	YDR075W	STB4	P50104	949 aa		4.63	□□□□□ -1.67
PPH3	YDR075W	YGR053C	P53234	283 aa		4.63	□□□□□ -1.67
PPH3	YDR075W	SRP1	Q02821	542 aa	Known RBP	4.63	□□□□□ -1.67
PPH3	YDR075W	MCH5	Q08777	521 aa		4.63	□□□□□ -1.67
PPH3	YDR075W	SNQ2	P32568	1501 aa	Known RBP	4.62	□□□□□ -1.67
PPH3	YDR075W	TRP4	P07285	380 aa	Predicted RBP	4.62	□□□□□ -1.67
PPH3	YDR075W	ASF1	P32447	279 aa		4.62	□□□□□ -1.67
PPH3	YDR075W	CDC12	P32468	407 aa	Known RBP	4.62	□□□□□ -1.67
PPH3	YDR075W	QRI1	P43123	477 aa	Known RBP	4.62	□□□□□ -1.67
PPH3	YDR075W	STU2	P46675	888 aa		4.62	□□□□□ -1.67
PPH3	YDR075W	ESC2	Q06340	456 aa		4.62	□□□□□ -1.67
PPH3	YDR075W	OMS1	Q06668	471 aa		4.61	□□□□□ -1.67
PPH3	YDR075W	ACF2	Q12168	779 aa		4.61	□□□□□ -1.67
PPH3	YDR075W	NUP157	P40064	1391 aa	Known RBP	4.61	□□□□□ -1.67
PPH3	YDR075W	SED4	P25365	1065 aa		4.6	□□□□□ -1.67
PPH3	YDR075W	STE14	P32584	239 aa		4.6	□□□□□ -1.67
PPH3	YDR075W	ABD1	P32783	436 aa	Predicted RBP	4.6	□□□□□ -1.67
PPH3	YDR075W	GYP7	P48365	746 aa		4.6	□□□□□ -1.67
PPH3	YDR075W	MBP1	P39678	833 aa		4.59	□□□□□ -1.67
PPH3	YDR075W	RNT1	Q02555	471 aa		4.59	□□□□□ -1.67
PPH3	YDR075W	YMR206W	Q03695	313 aa		4.59	□□□□□ -1.67
PPH3	YDR075W	YML020W	Q03722	664 aa		4.59	□□□□□ -1.67
PPH3	YDR075W	IRC10	Q08118	586 aa		4.59	□□□□□ -1.67
PPH3	YDR075W	YRF1-1	P0CX20	1796 aa		4.58	□□□□□ -1.68
PPH3	YDR075W	YRF1-5	P0CX21	1796 aa		4.58	□□□□□ -1.68
PPH3	YDR075W	YRF1-8	P0CX22	1796 aa		4.58	□□□□□ -1.68
PPH3	YDR075W	ATF1	P40353	525 aa		4.58	□□□□□ -1.68
PPH3	YDR075W	KRI1	P42846	591 aa	Known RBP	4.58	□□□□□ -1.68
PPH3	YDR075W	FAA4	P47912	694 aa	Known RBP	4.58	□□□□□ -1.68
PPH3	YDR075W	RAI1	P53063	387 aa	Known RBP	4.58	□□□□□ -1.68
PPH3	YDR075W	TIM44	Q01852	431 aa		4.58	□□□□□ -1.68
PPH3	YDR075W	SLU7	Q02775	382 aa	Known RBP	4.58	□□□□□ -1.68
PPH3	YDR075W	YPR196W	Q06595	470 aa		4.58	□□□□□ -1.68
PPH3	YDR075W	TY1B-JR2	P47100	1755 aa	Known RBP	4.58	□□□□□ -1.68
PPH3	YDR075W	TY1B-ER2	Q03619	1755 aa		4.58	□□□□□ -1.68
PPH3	YDR075W	TY1B-MR1	Q04214	1755 aa		4.58	□□□□□ -1.68
PPH3	YDR075W	TY1B-MR2	Q04670	1755 aa	Known RBP	4.58	□□□□□ -1.68
PPH3	YDR075W	TY1B-LR1	Q12088	1755 aa	Known RBP	4.58	□□□□□ -1.68
PPH3	YDR075W	TY1B-NL1	Q12112	1755 aa		4.58	□□□□□ -1.68
PPH3	YDR075W	TY1B-GR1	Q12141	1755 aa		4.58	□□□□□ -1.68
PPH3	YDR075W	TY1B-BL	Q12490	1755 aa		4.58	□□□□□ -1.68
PPH3	YDR075W	ALG7	P07286	448 aa		4.57	□□□□□ -1.68
PPH3	YDR075W	YKR078W	P36158	585 aa	Known RBP	4.57	□□□□□ -1.68
PPH3	YDR075W	YER158C	P40095	573 aa		4.57	□□□□□ -1.68
PPH3	YDR075W	DUS3	Q06053	668 aa	Known RBP	4.57	□□□□□ -1.68
PPH3	YDR075W	NOP8	Q08287	484 aa	Predicted RBP	4.57	□□□□□ -1.68
PPH3	YDR075W	PDR12	Q02785	1511 aa		4.56	□□□□□ -1.68
PPH3	YDR075W	PPR1	P07272	904 aa	Predicted RBP	4.56	□□□□□ -1.68
PPH3	YDR075W	SBA1	P28707	216 aa	Known RBP	4.56	□□□□□ -1.68
PPH3	YDR075W	ERG5	P54781	538 aa		4.56	□□□□□ -1.68
PPH3	YDR075W	BDF2	Q07442	638 aa		4.56	□□□□□ -1.68
PPH3	YDR075W	TRM13	Q12383	476 aa		4.56	□□□□□ -1.68
PPH3	YDR075W	IQG1	Q12280	1495 aa		4.56	□□□□□ -1.68
PPH3	YDR075W	AGP1	P25376	633 aa		4.55	□□□□□ -1.68
PPH3	YDR075W	TSL1	P38427	1098 aa	Known RBP	4.55	□□□□□ -1.68
PPH3	YDR075W	MUK1	Q02866	612 aa		4.55	□□□□□ -1.68
PPH3	YDR075W	GDE1	Q02979	1223 aa		4.55	□□□□□ -1.68
PPH3	YDR075W	NOT3	P06102	836 aa	Known RBP	4.54	□□□□□ -1.68
PPH3	YDR075W	CDC48	P25694	835 aa	Known RBP	4.54	□□□□□ -1.68
PPH3	YDR075W	MTH1	P35198	433 aa		4.54	□□□□□ -1.68
PPH3	YDR075W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
PPH3	YDR075W	YKE2	P52553	114 aa		4.54	□□□□□ -1.68
PPH3	YDR075W	GEA1	P47102	1408 aa	Predicted RBP	4.54	□□□□□ -1.68
PPH3	YDR075W	NUP170	P38181	1502 aa		4.53	□□□□□ -1.68
PPH3	YDR075W	RPO21	P04050	1733 aa	Known RBP	4.53	□□□□□ -1.68
PPH3	YDR075W	CUE2	P36075	443 aa	Known RBP	4.53	□□□□□ -1.68
PPH3	YDR075W	YBR238C	P38330	731 aa	Known RBP	4.53	□□□□□ -1.68
PPH3	YDR075W	YAP3	P38749	330 aa		4.53	□□□□□ -1.68
PPH3	YDR075W	GND2	P53319	492 aa		4.53	□□□□□ -1.68
PPH3	YDR075W	SSL1	Q04673	461 aa	Predicted RBP	4.53	□□□□□ -1.68
PPH3	YDR075W	PEX19	Q07418	342 aa		4.53	□□□□□ -1.68
PPH3	YDR075W	NTE1	Q04958	1679 aa		4.53	□□□□□ -1.68
PPH3	YDR075W	FBP1	P09201	348 aa		4.52	□□□□□ -1.69
PPH3	YDR075W	SEC21	P32074	935 aa	Known RBP	4.52	□□□□□ -1.69
PPH3	YDR075W	STE13	P33894	931 aa		4.52	□□□□□ -1.69
PPH3	YDR075W	SPC42	P36094	363 aa		4.52	□□□□□ -1.69
PPH3	YDR075W	LGE1	Q02796	332 aa	Known RBP	4.52	□□□□□ -1.69
PPH3	YDR075W	FAL1	Q12099	399 aa	Known RBP	4.52	□□□□□ -1.69
PPH3	YDR075W	CAT8	P39113	1433 aa		4.52	□□□□□ -1.69
PPH3	YDR075W	PDR15	Q04182	1529 aa	Known RBP	4.51	□□□□□ -1.69
PPH3	YDR075W	NPP1	P25353	742 aa		4.51	□□□□□ -1.69
PPH3	YDR075W	VBA5	P36172	582 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 125.5 ms