RNA–Protein interactions for RNA: YDL228C

YDL228C, Transcript of Dubious open reading frame, yeast

Gene YDL228C, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL228C	YDL228C	SES1	P07284	462 aa	Known RBP	4.62	□□□□□ -1.67
YDL228C	YDL228C	CBP3	P21560	335 aa		4.62	□□□□□ -1.67
YDL228C	YDL228C	PDC6	P26263	563 aa	Known RBP	4.62	□□□□□ -1.67
YDL228C	YDL228C	YHL017W	P38745	532 aa		4.62	□□□□□ -1.67
YDL228C	YDL228C	STT3	P39007	718 aa	Known RBP	4.62	□□□□□ -1.67
YDL228C	YDL228C	ACO2	P39533	789 aa		4.62	□□□□□ -1.67
YDL228C	YDL228C	HMF1	P40037	129 aa	Known RBP	4.62	□□□□□ -1.67
YDL228C	YDL228C	VTC4	P47075	721 aa		4.62	□□□□□ -1.67
YDL228C	YDL228C	SGM1	P47166	707 aa		4.62	□□□□□ -1.67
YDL228C	YDL228C	TRS120	Q04183	1289 aa		4.62	□□□□□ -1.67
YDL228C	YDL228C	PHM6	Q05637	104 aa		4.62	□□□□□ -1.67
YDL228C	YDL228C	CRD1	Q07560	283 aa		4.62	□□□□□ -1.67
YDL228C	YDL228C	GPI13	Q07830	1017 aa		4.62	□□□□□ -1.67
YDL228C	YDL228C	GET3	Q12154	354 aa	Known RBP	4.62	□□□□□ -1.67
YDL228C	YDL228C	PGK1	P00560	416 aa	Known RBP	4.61	□□□□□ -1.67
YDL228C	YDL228C	RPP2B	P02400	110 aa	Known RBP	4.61	□□□□□ -1.67
YDL228C	YDL228C	HSP82	P02829	709 aa	Known RBP	4.61	□□□□□ -1.67
YDL228C	YDL228C	CPA2	P03965	1118 aa	Known RBP	4.61	□□□□□ -1.67
YDL228C	YDL228C	MCM1	P11746	286 aa		4.61	□□□□□ -1.67
YDL228C	YDL228C	SNA3	P14359	133 aa		4.61	□□□□□ -1.67
YDL228C	YDL228C	VAN1	P23642	535 aa		4.61	□□□□□ -1.67
YDL228C	YDL228C	SRO9	P25567	434 aa	Known RBP	4.61	□□□□□ -1.67
YDL228C	YDL228C	IRE1	P32361	1115 aa		4.61	□□□□□ -1.67
YDL228C	YDL228C	BOL3	P39724	118 aa		4.61	□□□□□ -1.67
YDL228C	YDL228C	YEL025C	P39991	1188 aa		4.61	□□□□□ -1.67
YDL228C	YDL228C	ULP2	P40537	1034 aa	Predicted RBP	4.61	□□□□□ -1.67
YDL228C	YDL228C	BUD6	P41697	788 aa		4.61	□□□□□ -1.67
YDL228C	YDL228C	FOL2	P51601	243 aa	Known RBP	4.61	□□□□□ -1.67
YDL228C	YDL228C	TY1A-MR1	Q04215	440 aa		4.61	□□□□□ -1.67
YDL228C	YDL228C	VPS20	Q04272	221 aa		4.61	□□□□□ -1.67
YDL228C	YDL228C	SLK19	Q08581	821 aa	Known RBP	4.61	□□□□□ -1.67
YDL228C	YDL228C	YPL150W	Q12152	901 aa		4.61	□□□□□ -1.67
YDL228C	YDL228C	AHC1	Q12433	566 aa		4.61	□□□□□ -1.67
YDL228C	YDL228C	CEX1	Q12453	761 aa		4.61	□□□□□ -1.67
YDL228C	YDL228C	PTC5	Q12511	572 aa		4.61	□□□□□ -1.67
YDL228C	YDL228C	Q0182	Q9ZZW1	134 aa		4.61	□□□□□ -1.67
YDL228C	YDL228C	FKS1	P38631	1876 aa	Known RBP	4.6	□□□□□ -1.67
YDL228C	YDL228C	DED1	P06634	604 aa	Known RBP	4.6	□□□□□ -1.67
YDL228C	YDL228C	RPL19A	P0CX82	189 aa	Known RBP	4.6	□□□□□ -1.67
YDL228C	YDL228C	RPL19B	P0CX83	189 aa	Predicted RBP	4.6	□□□□□ -1.67
YDL228C	YDL228C	THR4	P16120	514 aa	Known RBP	4.6	□□□□□ -1.67
YDL228C	YDL228C	PRP22	P24384	1145 aa	Known RBP	4.6	□□□□□ -1.67
YDL228C	YDL228C	RME1	P32338	300 aa	Known RBP	4.6	□□□□□ -1.67
YDL228C	YDL228C	PGM1	P33401	570 aa	Known RBP	4.6	□□□□□ -1.67
YDL228C	YDL228C	SAS3	P34218	831 aa		4.6	□□□□□ -1.67
YDL228C	YDL228C	RFC5	P38251	354 aa		4.6	□□□□□ -1.67
YDL228C	YDL228C	NPA3	P47122	385 aa		4.6	□□□□□ -1.67
YDL228C	YDL228C	YGR153W	P48238	217 aa		4.6	□□□□□ -1.67
YDL228C	YDL228C	PSP2	P50109	593 aa	Known RBP	4.6	□□□□□ -1.67
YDL228C	YDL228C	ZPR1	P53303	486 aa	Known RBP	4.6	□□□□□ -1.67
YDL228C	YDL228C	UBP2	Q01476	1272 aa		4.6	□□□□□ -1.67
YDL228C	YDL228C	MFM1	Q02783	413 aa		4.6	□□□□□ -1.67
YDL228C	YDL228C	EAR1	Q03212	550 aa		4.6	□□□□□ -1.67
YDL228C	YDL228C	PUN1	Q06991	263 aa		4.6	□□□□□ -1.67
YDL228C	YDL228C	PSK2	Q08217	1101 aa		4.6	□□□□□ -1.67
YDL228C	YDL228C	ELG1	Q12050	791 aa		4.6	□□□□□ -1.67
YDL228C	YDL228C	CLN3	P13365	580 aa		4.59	□□□□□ -1.67
YDL228C	YDL228C	UBC1	P21734	215 aa	Known RBP	4.59	□□□□□ -1.67
YDL228C	YDL228C	GSY1	P23337	708 aa		4.59	□□□□□ -1.67
YDL228C	YDL228C	CDC48	P25694	835 aa	Known RBP	4.59	□□□□□ -1.67
YDL228C	YDL228C	SMY2	P32909	740 aa	Known RBP	4.59	□□□□□ -1.67
YDL228C	YDL228C	AHP1	P38013	176 aa	Known RBP	4.59	□□□□□ -1.67
YDL228C	YDL228C	MAL33	P38157	468 aa		4.59	□□□□□ -1.67
YDL228C	YDL228C	POA1	P38218	177 aa		4.59	□□□□□ -1.67
YDL228C	YDL228C	YBR197C	P38306	217 aa		4.59	□□□□□ -1.67
YDL228C	YDL228C	ALD5	P40047	520 aa	Known RBP	4.59	□□□□□ -1.67
YDL228C	YDL228C	FIS1	P40515	155 aa		4.59	□□□□□ -1.67
YDL228C	YDL228C	HUL5	P53119	910 aa		4.59	□□□□□ -1.67
YDL228C	YDL228C	CUS1	Q02554	436 aa	Predicted RBP	4.59	□□□□□ -1.67
YDL228C	YDL228C	YML020W	Q03722	664 aa		4.59	□□□□□ -1.67
YDL228C	YDL228C	CSM3	Q04659	317 aa		4.59	□□□□□ -1.67
YDL228C	YDL228C	EIS1	Q05050	843 aa	Known RBP	4.59	□□□□□ -1.67
YDL228C	YDL228C	SVF1	Q05515	481 aa		4.59	□□□□□ -1.67
YDL228C	YDL228C	COQ9	Q05779	260 aa		4.59	□□□□□ -1.67
YDL228C	YDL228C	ADY4	Q05955	493 aa		4.59	□□□□□ -1.67
YDL228C	YDL228C	YLR346C	Q06139	101 aa		4.59	□□□□□ -1.67
YDL228C	YDL228C	UBR2	Q07963	1872 aa		4.59	□□□□□ -1.67
YDL228C	YDL228C	TUF1	P02992	437 aa	Known RBP	4.58	□□□□□ -1.68
YDL228C	YDL228C	ALG1	P16661	449 aa		4.58	□□□□□ -1.68
YDL228C	YDL228C	RPB10	P22139	70 aa		4.58	□□□□□ -1.68
YDL228C	YDL228C	MBR1	P23493	339 aa		4.58	□□□□□ -1.68
YDL228C	YDL228C	URA1	P28272	314 aa	Predicted RBP	4.58	□□□□□ -1.68
YDL228C	YDL228C	ASF1	P32447	279 aa		4.58	□□□□□ -1.68
YDL228C	YDL228C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
YDL228C	YDL228C	ISC10	P32645	267 aa		4.58	□□□□□ -1.68
YDL228C	YDL228C	JHD1	P40034	492 aa		4.58	□□□□□ -1.68
YDL228C	YDL228C	ACF4	P47129	309 aa		4.58	□□□□□ -1.68
YDL228C	YDL228C	YGR035C	P53222	116 aa		4.58	□□□□□ -1.68
YDL228C	YDL228C	SDA1	P53313	767 aa	Known RBP	4.58	□□□□□ -1.68
YDL228C	YDL228C	CNM67	P53865	581 aa	Known RBP	4.58	□□□□□ -1.68
YDL228C	YDL228C	PGA2	P53903	129 aa		4.58	□□□□□ -1.68
YDL228C	YDL228C	ROD1	Q02805	837 aa		4.58	□□□□□ -1.68
YDL228C	YDL228C	MUK1	Q02866	612 aa		4.58	□□□□□ -1.68
YDL228C	YDL228C	PNP1	Q05788	311 aa		4.58	□□□□□ -1.68
YDL228C	YDL228C	YOR296W	Q08748	1289 aa		4.58	□□□□□ -1.68
YDL228C	YDL228C	TIP41	Q12199	356 aa		4.58	□□□□□ -1.68
YDL228C	YDL228C	TRS33	Q99394	268 aa		4.58	□□□□□ -1.68
YDL228C	YDL228C	SRD1	P09007	221 aa		4.57	□□□□□ -1.68
YDL228C	YDL228C	YEL076C-A	P0CX16	216 aa		4.57	□□□□□ -1.68
YDL228C	YDL228C	YLR464W	P0CX17	216 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms