RNA–Protein interactions for RNA: RDN5-3

RDN5-3, Transcript of Variant 5S ribosomal RNA (5S rRNA) gene, yeastyeast

Gene RDN5-3, Length 119 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN5-3RDN5-3 YFL064CP43540 174 aa7.2□□□□□ -1.26
RDN5-3RDN5-3 MTC3P53077 123 aa7.2□□□□□ -1.26
RDN5-3RDN5-3 RIM8P53179 542 aa7.2□□□□□ -1.26
RDN5-3RDN5-3 TDA9Q04545 1251 aa7.2□□□□□ -1.26
RDN5-3RDN5-3 DON1Q05610 365 aa7.2□□□□□ -1.26
RDN5-3RDN5-3 FRA1Q07825 749 aa7.2□□□□□ -1.26
RDN5-3RDN5-3 SDH5Q08230 162 aa7.2□□□□□ -1.26
RDN5-3RDN5-3 DIP2Q12220 943 aaPredicted RBP7.2□□□□□ -1.26
RDN5-3RDN5-3 YBL111CQ3E7Y5 667 aa7.2□□□□□ -1.26
RDN5-3RDN5-3 PMR1P13586 950 aa7.19□□□□□ -1.26
RDN5-3RDN5-3 ICL1P28240 557 aaPredicted RBP7.19□□□□□ -1.26
RDN5-3RDN5-3 KIP1P28742 1111 aa7.19□□□□□ -1.26
RDN5-3RDN5-3 SUV3P32580 737 aa7.19□□□□□ -1.26
RDN5-3RDN5-3 TFC4P33339 1025 aa7.19□□□□□ -1.26
RDN5-3RDN5-3 YKL050CP35736 922 aa7.19□□□□□ -1.26
RDN5-3RDN5-3 RPC37P36121 282 aa7.19□□□□□ -1.26
RDN5-3RDN5-3 HIS2P38635 335 aa7.19□□□□□ -1.26
RDN5-3RDN5-3 SHC1P39000 512 aa7.19□□□□□ -1.26
RDN5-3RDN5-3 RPN3P40016 523 aaKnown RBP7.19□□□□□ -1.26
RDN5-3RDN5-3 LCP5P40079 357 aaPredicted RBP7.19□□□□□ -1.26
RDN5-3RDN5-3 VPS4P52917 437 aa7.19□□□□□ -1.26
RDN5-3RDN5-3 ALD6P54115 500 aaKnown RBP7.19□□□□□ -1.26
RDN5-3RDN5-3 UTP6Q02354 440 aaKnown RBP7.19□□□□□ -1.26
RDN5-3RDN5-3 YML082WQ04533 649 aaKnown RBP7.19□□□□□ -1.26
RDN5-3RDN5-3 PGK1P00560 416 aaKnown RBP7.18□□□□□ -1.26
RDN5-3RDN5-3 RNA1P11745 407 aaKnown RBP7.18□□□□□ -1.26
RDN5-3RDN5-3 PEP5P12868 1029 aa7.18□□□□□ -1.26
RDN5-3RDN5-3 CHS2P14180 963 aa7.18□□□□□ -1.26
RDN5-3RDN5-3 NAM7P30771 971 aaKnown RBP7.18□□□□□ -1.26
RDN5-3RDN5-3 PLC1P32383 869 aa7.18□□□□□ -1.26
RDN5-3RDN5-3 NIP1P32497 812 aaKnown RBP7.18□□□□□ -1.26
RDN5-3RDN5-3 YSC83P32792 385 aa7.18□□□□□ -1.26
RDN5-3RDN5-3 YKL023WP36103 277 aaKnown RBP7.18□□□□□ -1.26
RDN5-3RDN5-3 PGM2P37012 569 aaKnown RBP7.18□□□□□ -1.26
RDN5-3RDN5-3 TIF5P38431 405 aaKnown RBP7.18□□□□□ -1.26
RDN5-3RDN5-3 SMX2P40204 77 aaKnown RBP7.18□□□□□ -1.26
RDN5-3RDN5-3 FIS1P40515 155 aa7.18□□□□□ -1.26
RDN5-3RDN5-3 INA22P40576 216 aa7.18□□□□□ -1.26
RDN5-3RDN5-3 LCB2P40970 561 aa7.18□□□□□ -1.26
RDN5-3RDN5-3 LIF1P53150 421 aa7.18□□□□□ -1.26
RDN5-3RDN5-3 NCS2P53923 493 aaPredicted RBP7.18□□□□□ -1.26
RDN5-3RDN5-3 YNL035CP53962 389 aaKnown RBP7.18□□□□□ -1.26
RDN5-3RDN5-3 TIM8P57744 87 aa7.18□□□□□ -1.26
RDN5-3RDN5-3 ERV41Q04651 352 aa7.18□□□□□ -1.26
RDN5-3RDN5-3 YDR338CQ05497 695 aa7.18□□□□□ -1.26
RDN5-3RDN5-3 PIG1Q06216 648 aa7.18□□□□□ -1.26
RDN5-3RDN5-3 WHI4Q07655 649 aaKnown RBP7.18□□□□□ -1.26
RDN5-3RDN5-3 PUF3Q07807 879 aaKnown RBP RIP-Chip data7.18□□□□□ -1.26not detected
RDN5-3RDN5-3 NCA2Q12374 616 aa7.18□□□□□ -1.26
RDN5-3RDN5-3 TUB2P02557 457 aaKnown RBP7.17□□□□□ -1.26
RDN5-3RDN5-3 SUP45P12385 437 aaKnown RBP7.17□□□□□ -1.26
RDN5-3RDN5-3 ESS1P22696 170 aa7.17□□□□□ -1.26
RDN5-3RDN5-3 YEL1P34225 687 aa7.17□□□□□ -1.26
RDN5-3RDN5-3 TRZ1P36159 838 aaPredicted RBP7.17□□□□□ -1.26
RDN5-3RDN5-3 ECM2P38241 364 aaKnown RBP7.17□□□□□ -1.26
RDN5-3RDN5-3 RRT2P38332 387 aa7.17□□□□□ -1.26
RDN5-3RDN5-3 NDT80P38830 627 aa7.17□□□□□ -1.26
RDN5-3RDN5-3 NMD5P46970 1048 aa7.17□□□□□ -1.26
RDN5-3RDN5-3 URB2P47108 1174 aa7.17□□□□□ -1.26
RDN5-3RDN5-3 DIP5P53388 608 aa7.17□□□□□ -1.26
RDN5-3RDN5-3 CPR6P53691 371 aaKnown RBP7.17□□□□□ -1.26
RDN5-3RDN5-3 UBP3Q01477 912 aaKnown RBP RIP-Chip data7.17□□□□□ -1.26not detected
RDN5-3RDN5-3 KIN4Q01919 800 aa7.17□□□□□ -1.26
RDN5-3RDN5-3 SHR3Q02774 210 aa7.17□□□□□ -1.26
RDN5-3RDN5-3 USA1Q03714 838 aa7.17□□□□□ -1.26
RDN5-3RDN5-3 ATG16Q03818 150 aa7.17□□□□□ -1.26
RDN5-3RDN5-3 GUD1Q07729 489 aa7.17□□□□□ -1.26
RDN5-3RDN5-3 RKM4Q12504 494 aa7.17□□□□□ -1.26
RDN5-3RDN5-3 CDC33P07260 213 aaKnown RBP7.16□□□□□ -1.26
RDN5-3RDN5-3 PDB1P32473 366 aaKnown RBP7.16□□□□□ -1.26
RDN5-3RDN5-3 RAD5P32849 1169 aaPredicted RBP7.16□□□□□ -1.26
RDN5-3RDN5-3 VPS35P34110 944 aa7.16□□□□□ -1.26
RDN5-3RDN5-3 PHO88P38264 188 aaPredicted RBP7.16□□□□□ -1.26
RDN5-3RDN5-3 RIO2P40160 425 aaKnown RBP7.16□□□□□ -1.26
RDN5-3RDN5-3 YTA12P40341 825 aa7.16□□□□□ -1.26
RDN5-3RDN5-3 ULP2P40537 1034 aaPredicted RBP7.16□□□□□ -1.26
RDN5-3RDN5-3 VPS70P47161 811 aa7.16□□□□□ -1.26
RDN5-3RDN5-3 BRO1P48582 844 aa7.16□□□□□ -1.26
RDN5-3RDN5-3 ARK1P53974 638 aa7.16□□□□□ -1.26
RDN5-3RDN5-3 ADA2Q02336 434 aa7.16□□□□□ -1.26
RDN5-3RDN5-3 SUB2Q07478 446 aaKnown RBP7.16□□□□□ -1.26
RDN5-3RDN5-3 YDL206WQ12424 762 aa7.16□□□□□ -1.26
RDN5-3RDN5-3 TY1B-AO13527 1196 aaKnown RBP7.15□□□□□ -1.26
RDN5-3RDN5-3 JIP3O13555 125 aa7.15□□□□□ -1.26
RDN5-3RDN5-3 PHR1P05066 565 aaKnown RBP RIP-Chip data7.15□□□□□ -1.26not detected
RDN5-3RDN5-3 SPO16P17122 198 aa7.15□□□□□ -1.26
RDN5-3RDN5-3 GAL11P19659 1081 aa7.15□□□□□ -1.26
RDN5-3RDN5-3 DBP5P20449 482 aaKnown RBP7.15□□□□□ -1.26
RDN5-3RDN5-3 MSM1P22438 575 aa7.15□□□□□ -1.26
RDN5-3RDN5-3 DBF4P32325 704 aa7.15□□□□□ -1.26
RDN5-3RDN5-3 UBP11P36026 717 aa7.15□□□□□ -1.26
RDN5-3RDN5-3 HEK2P38199 381 aaKnown RBP RIP-Chip data7.15□□□□□ -1.26not detected
RDN5-3RDN5-3 EXO5P38289 585 aa7.15□□□□□ -1.26
RDN5-3RDN5-3 KEL1P38853 1164 aaKnown RBP7.15□□□□□ -1.26
RDN5-3RDN5-3 PMC1P38929 1173 aaPredicted RBP7.15□□□□□ -1.26
RDN5-3RDN5-3 END3P39013 349 aa7.15□□□□□ -1.26
RDN5-3RDN5-3 KAP123P40069 1113 aaKnown RBP7.15□□□□□ -1.26
RDN5-3RDN5-3 YER156CP40093 338 aaKnown RBP7.15□□□□□ -1.26
RDN5-3RDN5-3 YMR1P47147 688 aaKnown RBP RIP-Chip data7.15□□□□□ -1.26not detected
RDN5-3RDN5-3 YGR111WP53265 400 aa7.15□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 70.8 ms