RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 VimP20152 466 aaKnown RBP17.84■□□□□ 0.45
Ubr3-201ENSMUST00000055758 TmpoQ61033 693 aaKnown RBP17.84■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Hand2Q61039 217 aa17.84■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Ehbp1Q69ZW3 1231 aa17.84■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Synpo2Q91YE8 1087 aaKnown RBP17.84■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Gbp6A0A0G2JDV3 611 aa17.84■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Gm43302L7N1X8 611 aa17.84■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Ddx54Q8K4L0 874 aaKnown RBP17.84■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Krt23Q99PS0 422 aa17.84■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Lztfl1Q9JHQ5 299 aa17.84■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Rasal2E9PW37 1286 aa17.83■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Evi5lH3BKQ3 813 aa17.83■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Amotl1Q9D4H4 968 aa17.83■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Six6os1Q9CTN5 574 aa17.83■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Ampd3O08739 766 aa17.83■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Stmn2P55821 179 aa17.83■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Cfap157Q0VFX2 523 aa17.83■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Jade3Q6IE82 823 aa17.83■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Cecr2E9Q2Z1 1453 aa17.82■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Ift88Q61371 824 aa17.82■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Opa1P58281 960 aa17.82■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Plekhm2Q80TQ5 1018 aa17.82■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Gbp9Q8BTS3 619 aa17.82■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Fam50bQ9WTJ8 334 aa17.82■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Kif5cP28738 956 aaKnown RBP17.82■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Tmed1Q3V009 227 aa17.82■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Gtpbp4Q99ME9 634 aaKnown RBP17.82■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Lrrc23O35125 340 aa17.82■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Diaph2O70566 1098 aa17.82■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Ppfia2Q8BSS9 1257 aa17.82■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Arhgap5P97393 1501 aa17.82■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Speer4aF8VPX6 267 aa17.82■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Aplp1Q03157 653 aa17.82■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Agbl1Q09M05 972 aa17.82■□□□□ 0.44
Ubr3-201ENSMUST00000055758 RragbQ6NTA4 374 aa17.82■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Zfp397Q7TNK4 527 aa17.81■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Dph6Q9CQ28 267 aa17.81■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Dnm1P39053 867 aa17.81■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Tsnaxip1Q99P25 704 aa17.81■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Drc1Q3USS3 753 aa17.81■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Tsr2Q8C8T8 191 aa17.81■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Metap2O08663 478 aaKnown RBP17.81■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Stmn4P63042 189 aa17.81■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Calcoco1Q8CGU1 691 aa17.81■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Sun3Q5SS91 320 aa17.81■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Rassf2Q8BMS9 326 aa17.81■□□□□ 0.44
Ubr3-201ENSMUST00000055758 AmfrQ9R049 643 aa17.81■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Srgap1Q91Z69 1062 aa17.81■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Ripk4Q9ERK0 786 aa17.8■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Ddx24Q9ESV0 857 aaKnown RBP17.8■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Clip2Q9Z0H8 1047 aa17.8■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Tpx2A2APB8 745 aaKnown RBP17.8■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Zbtb16Q3UQ17 673 aa17.8■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Krt15Q61414 452 aa17.8■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Nlrp3Q8R4B8 1033 aa17.8■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Kmt5bQ3U8K7 883 aa17.8■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Plekhg5Q66T02 1073 aa17.8■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Taok3Q8BYC6 898 aa17.8■□□□□ 0.44
Ubr3-201ENSMUST00000055758 GlmnQ8BZM1 596 aa17.8■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Atf7Q8R0S1 413 aa17.8■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Cacna2d3Q9Z1L5 1091 aa17.8■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Cib2Q9Z309 187 aa17.8■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Ca8P28651 291 aa17.8■□□□□ 0.44
Ubr3-201ENSMUST00000055758 NgdnQ9DB96 315 aaKnown RBP17.8■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Ddx49Q4FZF3 480 aaKnown RBP17.79■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Cul5Q9D5V5 780 aa17.79■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Homer2Q9QWW1 354 aa17.79■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Pds5bQ4VA53 1446 aaKnown RBP17.79■□□□□ 0.44
Ubr3-201ENSMUST00000055758 U2af2P26369 475 aaKnown RBP17.79■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Psmb7P70195 277 aa17.79■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Ppp1r12cQ3UMT1 782 aa17.79■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Tbc1d32Q3URV1 1296 aa17.79■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Uchl5Q9WUP7 329 aa17.79■□□□□ 0.44
Ubr3-201ENSMUST00000055758 NpcdF8VQB8 469 aa17.79■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Pkd2l2Q9JLG4 621 aa17.79■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Ccdc170D3YXL0 722 aa17.79■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Stat1P42225 749 aa17.79■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Tpd52l2Q9CYZ2 220 aaKnown RBP17.79■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Nub1P54729 614 aa17.79■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Phlpp2Q8BXA7 1320 aa17.78■□□□□ 0.44
Ubr3-201ENSMUST00000055758 ChkbO55229 394 aa17.78■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Satb1Q60611 764 aa17.78■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Gm7347D3YYI9 267 aa17.78■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Cdca8Q8BHX3 289 aa17.78■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Tyro3P55144 880 aa17.78■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Cdan1Q8CC12 1239 aa17.78■□□□□ 0.44
Ubr3-201ENSMUST00000055758 TkfcQ8VC30 578 aa17.78■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Ebag9Q9D0V7 213 aa17.78■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Setdb1O88974 1307 aa17.78■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Exoc1Q8R3S6 894 aa17.78■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Rufy3Q9D394 469 aa17.78■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Map3k11Q80XI6 850 aa17.78■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Gys2Q8VCB3 704 aa17.78■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Fam186bD3Z420 943 aa17.78■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Atp1a2Q6PIE5 1020 aa17.78■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Gsta4P24472 222 aa17.77■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Traf3ip1Q149C2 625 aa17.77■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Pnpla2Q8BJ56 486 aa17.77■□□□□ 0.44
Ubr3-201ENSMUST00000055758 LrgukQ9D5S7 820 aa17.77■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Egfl6Q9JJZ5 550 aa17.77■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms