Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Gm25239-201ENSMUST00000174915 86 ntBASIC40.36■■■■■ 4.05
Satb1Q60611 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
Satb1Q60611 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
Satb1Q60611 Gm24109-201ENSMUST00000175489 103 ntBASIC35.43■■■■□ 3.26
Satb1Q60611 Gm15042-201ENSMUST00000120212 883 ntBASIC34.5■■■■□ 3.11
Satb1Q60611 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
Satb1Q60611 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.14■■■■□ 3.06
Satb1Q60611 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
Satb1Q60611 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
Satb1Q60611 Gm23366-201ENSMUST00000175022 89 ntBASIC33.63■■■□□ 2.97
Satb1Q60611 Gm15045-201ENSMUST00000117359 883 ntBASIC33.55■■■□□ 2.96
Satb1Q60611 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.3■■■□□ 2.92
Satb1Q60611 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.06■■■□□ 2.88
Satb1Q60611 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Satb1Q60611 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Satb1Q60611 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.84■■■□□ 2.85
Satb1Q60611 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Satb1Q60611 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Satb1Q60611 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Satb1Q60611 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.24■■■□□ 2.75
Satb1Q60611 Gm25238-201ENSMUST00000174914 89 ntBASIC32.1■■■□□ 2.73
Satb1Q60611 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Satb1Q60611 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Satb1Q60611 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
Satb1Q60611 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
Satb1Q60611 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.46■■■□□ 2.63
Satb1Q60611 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Satb1Q60611 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
Satb1Q60611 Gm25262-201ENSMUST00000174934 133 ntBASIC31.21■■■□□ 2.59
Satb1Q60611 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.98■■■□□ 2.55
Satb1Q60611 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.98■■■□□ 2.55
Satb1Q60611 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.8■■■□□ 2.52
Satb1Q60611 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.8■■■□□ 2.52
Satb1Q60611 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Satb1Q60611 Gm26115-201ENSMUST00000175605 87 ntBASIC30.78■■■□□ 2.52
Satb1Q60611 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.77■■■□□ 2.52
Satb1Q60611 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Satb1Q60611 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.54■■■□□ 2.48
Satb1Q60611 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
Satb1Q60611 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Satb1Q60611 Psd-208ENSMUST00000224556 2034 ntBASIC30.47■■■□□ 2.47
Satb1Q60611 Gm8109-201ENSMUST00000194076 746 ntBASIC30.47■■■□□ 2.47
Satb1Q60611 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Satb1Q60611 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Satb1Q60611 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Satb1Q60611 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Satb1Q60611 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Satb1Q60611 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
Satb1Q60611 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.11■■■□□ 2.41
Satb1Q60611 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.1■■■□□ 2.41
Satb1Q60611 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Satb1Q60611 Rab21-202ENSMUST00000218831 843 ntBASIC30.08■■■□□ 2.41
Satb1Q60611 Gm27325-201ENSMUST00000175467 74 ntBASIC30.07■■■□□ 2.4
Satb1Q60611 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
Satb1Q60611 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Satb1Q60611 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
Satb1Q60611 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Satb1Q60611 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.84■■■□□ 2.37
Satb1Q60611 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.69■■■□□ 2.34
Satb1Q60611 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.64■■■□□ 2.34
Satb1Q60611 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.64■■■□□ 2.34
Satb1Q60611 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Satb1Q60611 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Satb1Q60611 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
Satb1Q60611 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Satb1Q60611 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
Satb1Q60611 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Satb1Q60611 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Satb1Q60611 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Satb1Q60611 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Satb1Q60611 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Satb1Q60611 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Satb1Q60611 Gm24804-201ENSMUST00000174982 85 ntBASIC29.37■■■□□ 2.29
Satb1Q60611 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Satb1Q60611 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.2■■■□□ 2.26
Satb1Q60611 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
Satb1Q60611 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Satb1Q60611 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.11■■■□□ 2.25
Satb1Q60611 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.06■■■□□ 2.24
Satb1Q60611 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
Satb1Q60611 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.06■■■□□ 2.24
Satb1Q60611 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.02■■■□□ 2.24
Satb1Q60611 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.94■■■□□ 2.22
Satb1Q60611 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Satb1Q60611 Zfp131-205ENSMUST00000223812 663 ntBASIC28.93■■■□□ 2.22
Satb1Q60611 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.93■■■□□ 2.22
Satb1Q60611 Gm27322-201ENSMUST00000184007 104 ntBASIC28.88■■■□□ 2.21
Satb1Q60611 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Satb1Q60611 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Satb1Q60611 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.87■■■□□ 2.21
Satb1Q60611 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.86■■■□□ 2.21
Satb1Q60611 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Satb1Q60611 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Satb1Q60611 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Satb1Q60611 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Satb1Q60611 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Satb1Q60611 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Satb1Q60611 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Satb1Q60611 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.72■■■□□ 2.19
Satb1Q60611 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms