RNA–Protein interactions for RNA: ENSMUST00000046916.8

Ckap2-201, Transcript of Cytoskeleton-associated protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap2, Length 2,593 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2-201ENSMUST00000046916 Atp1b3P97370 278 aa13.64□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Nucb1Q02819 459 aaKnown RBP13.64□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Rtkn2Q14B46 604 aa13.64□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Ppip5k2Q6ZQB6 1129 aa13.64□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Tfip11Q9ERA6 838 aaKnown RBP13.64□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Usp21Q9QZL6 566 aa13.64□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Nup188Q6ZQH8 1759 aa13.63□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Fam13aQ8BGI4 693 aa13.63□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Ppp6r3Q922D4 844 aa13.63□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Dmrtc1Q9D9R7 182 aa13.63□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Atf5O70191 283 aa13.63□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Snai1Q02085 264 aa13.63□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Aplp1Q03157 653 aa13.63□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Rrp12Q6P5B0 1295 aaKnown RBP13.63□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Gnl3lQ6PGG6 577 aaKnown RBP13.63□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Zbtb1Q91VL9 713 aa13.63□□□□□ -0.23
Ckap2-201ENSMUST00000046916 PsapQ61207 557 aaKnown RBP13.62□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Prr5lA2AVJ5 370 aa13.62□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Npy5rO70342 466 aa13.62□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Lmnb1P14733 588 aaKnown RBP13.62□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Ssc5dQ8BV57 1371 aa13.61□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Kif13bA0A286YCV9 1847 aa13.61□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Pdia3P27773 505 aaKnown RBP13.61□□□□□ -0.23
Ckap2-201ENSMUST00000046916 DekQ7TNV0 380 aaKnown RBP13.61□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Mrps27Q8BK72 415 aaKnown RBP13.61□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Pdia6Q922R8 440 aaKnown RBP13.61□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Ankrd31A0A140LI88 1765 aa13.61□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Trim44Q9QXA7 346 aa13.61□□□□□ -0.23
Ckap2-201ENSMUST00000046916 1810065E05RikQ5NC41 235 aa13.6□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Zkscan1Q8BGS3 561 aaKnown RBP13.6□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Rnaseh2aQ9CWY8 301 aa13.6□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Vsig10D3YX43 558 aa13.6□□□□□ -0.23
Ckap2-201ENSMUST00000046916 FanclQ9CR14 375 aa13.6□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Syde2E9PUP1 1314 aa13.59□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Esco1Q69Z69 843 aa13.59□□□□□ -0.23
Ckap2-201ENSMUST00000046916 U2surpQ6NV83 1029 aaKnown RBP13.59□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Slc34a2Q9DBP0 697 aa13.59□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Col4a1P02463 1669 aa13.59□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Snap23O09044 210 aa13.59□□□□□ -0.23
Ckap2-201ENSMUST00000046916 ImpactO55091 318 aa13.59□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Msl1Q6PDM1 616 aa13.59□□□□□ -0.23
Ckap2-201ENSMUST00000046916 FktnQ8R507 461 aa13.59□□□□□ -0.23
Ckap2-201ENSMUST00000046916 GckrQ91X44 587 aa13.59□□□□□ -0.23
Ckap2-201ENSMUST00000046916 D830030K20RikE9PYQ5 218 aa13.58□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Dhx16G3X8X0 1044 aaKnown RBP13.58□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Gm3043K7N693 218 aa13.58□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Gm16440K7N6G6 218 aa13.58□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Gm2244L7N2A3 218 aa13.58□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Gm3278L7N2D2 218 aa13.58□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Gm8271L7N2E2 218 aa13.58□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Bag4Q8CI61 457 aa13.58□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Nip7Q9CXK8 180 aaKnown RBP13.58□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Prkar2bP31324 416 aa13.58□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Irf5P56477 497 aa13.58□□□□□ -0.24
Ckap2-201ENSMUST00000046916 CpzQ8R4V4 654 aa13.58□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Triml2E9PW10 424 aa13.57□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Ccdc146E9Q9F7 977 aa13.57□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Soga3Q6NZL0 945 aa13.57□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Plin1Q8CGN5 517 aa13.57□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Noc3lQ8VI84 807 aaKnown RBP13.57□□□□□ -0.24
Ckap2-201ENSMUST00000046916 PigbQ9JJQ0 542 aa13.57□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Cyp46a1Q9WVK8 500 aa13.57□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Clcn1Q64347 994 aa13.57□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Rbm10Q99KG3 930 aaKnown RBP13.57□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Taf1dQ9D4V4 322 aa13.57□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Cnksr1A2A9K7 700 aa13.56□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Erc2Q6PH08 957 aa13.56□□□□□ -0.24
Ckap2-201ENSMUST00000046916 IarsQ8BU30 1262 aa13.56□□□□□ -0.24
Ckap2-201ENSMUST00000046916 AbraQ8BUZ1 375 aa13.56□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Tmx3Q8BXZ1 456 aa13.56□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Klhdc4Q921I2 584 aa13.56□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Greb1lB9EJV3 1913 aa13.56□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Cnnm1Q0GA42 951 aa13.56□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Map3k9Q3U1V8 1077 aa13.56□□□□□ -0.24
Ckap2-201ENSMUST00000046916 GorabQ8BRM2 368 aa13.56□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Atg4a-psA0A0G2JFS9 396 aa13.55□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Atg4aQ8C9S8 396 aa13.55□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Spon1Q8VCC9 807 aa13.55□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Stk36Q69ZM6 1316 aa13.55□□□□□ -0.24
Ckap2-201ENSMUST00000046916 NpcdF8VQB8 469 aa13.55□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Zkscan2G3X952 960 aa13.55□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Tex2Q6ZPJ0 1128 aaKnown RBP13.55□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Cyp27a1Q9DBG1 533 aa13.55□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Ripk4Q9ERK0 786 aa13.55□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Pde3aQ9Z0X4 1141 aa13.55□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Ankle2Q6P1H6 964 aa13.54□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Chrna2Q91X60 512 aa13.54□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Trip6Q9Z1Y4 480 aa13.54□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Pdia4P08003 638 aaKnown RBP13.54□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Nol8Q3UHX0 1147 aaKnown RBP13.54□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Cyp2c67Q569X9 491 aa13.54□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Zcwpw1Q6IR42 630 aa13.54□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Bloc1s4Q8VED2 215 aa13.54□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Glipr1l2Q9CQ35 332 aa13.54□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Anapc15P60007 132 aa13.53□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Aifm3Q3TY86 605 aa13.53□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Dpf2Q61103 391 aaKnown RBP13.53□□□□□ -0.24
Ckap2-201ENSMUST00000046916 PrimpolQ6P1E7 537 aa13.53□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Ddrgk1Q80WW9 315 aa13.53□□□□□ -0.24
Ckap2-201ENSMUST00000046916 Sv2bQ8BG39 683 aa13.53□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 7.9 ms