RNA–Protein interactions for RNA: ENSMUST00000046916.8

Ckap2-201, Transcript of Cytoskeleton-associated protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap2, Length 2,593 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2-201ENSMUST00000046916 Gm35339A0A140LHH9 1649 aa24.96■■□□□ 1.59
Ckap2-201ENSMUST00000046916 NischQ80TM9 1593 aa24.12■■□□□ 1.45
Ckap2-201ENSMUST00000046916 Abcc9P70170 1546 aa23.5■■□□□ 1.35
Ckap2-201ENSMUST00000046916 Abcc8B2RUS7 1588 aa23.46■■□□□ 1.35
Ckap2-201ENSMUST00000046916 ScribQ80U72 1612 aa22.64■■□□□ 1.21
Ckap2-201ENSMUST00000046916 NacadQ5SWP3 1504 aa22■■□□□ 1.11
Ckap2-201ENSMUST00000046916 Dcaf1Q80TR8 1506 aa21.89■■□□□ 1.09
Ckap2-201ENSMUST00000046916 Kdm5dQ62240 1548 aa21.82■■□□□ 1.08
Ckap2-201ENSMUST00000046916 Sycp2Q9CUU3 1500 aa21.55■■□□□ 1.04
Ckap2-201ENSMUST00000046916 Ccdc180J3QNE4 1664 aa21.29■■□□□ 1
Ckap2-201ENSMUST00000046916 BicraF8VPZ9 1578 aa21.19■□□□□ 0.98
Ckap2-201ENSMUST00000046916 Crybg2B7ZCC2 1516 aa21.04■□□□□ 0.96
Ckap2-201ENSMUST00000046916 Rb1cc1Q9ESK9 1588 aa21.01■□□□□ 0.95
Ckap2-201ENSMUST00000046916 Baz1aO88379 1555 aa20.82■□□□□ 0.92
Ckap2-201ENSMUST00000046916 Pds5bQ4VA53 1446 aaKnown RBP20.69■□□□□ 0.9
Ckap2-201ENSMUST00000046916 Thoc2B1AZI6 1594 aaKnown RBP20.65■□□□□ 0.9
Ckap2-201ENSMUST00000046916 Atad2bE9Q166 1460 aaKnown RBP20.47■□□□□ 0.87
Ckap2-201ENSMUST00000046916 Baz1bQ9Z277 1479 aa20.4■□□□□ 0.86
Ckap2-201ENSMUST00000046916 Smarca2Q6DIC0 1577 aa20.35■□□□□ 0.85
Ckap2-201ENSMUST00000046916 Smarca4Q3TKT4 1613 aaKnown RBP20.26■□□□□ 0.83
Ckap2-201ENSMUST00000046916 Fam135aQ6NS59 1506 aa20.19■□□□□ 0.82
Ckap2-201ENSMUST00000046916 Dnajc5bQ9CQ94 199 aa20.18■□□□□ 0.82
Ckap2-201ENSMUST00000046916 Ercc6F8VPZ5 1481 aa20.17■□□□□ 0.82
Ckap2-201ENSMUST00000046916 Zcchc6Q5BLK4 1491 aaKnown RBP20.12■□□□□ 0.81
Ckap2-201ENSMUST00000046916 Iqgap2Q3UQ44 1575 aa20.1■□□□□ 0.81
Ckap2-201ENSMUST00000046916 Cc2d2aQ8CFW7 1633 aa20.07■□□□□ 0.8
Ckap2-201ENSMUST00000046916 Rhox8Q6VSS7 320 aa20.01■□□□□ 0.79
Ckap2-201ENSMUST00000046916 Wdr62Q3U3T8 1523 aa20.01■□□□□ 0.79
Ckap2-201ENSMUST00000046916 Rtl1Q7M732 1744 aa19.93■□□□□ 0.78
Ckap2-201ENSMUST00000046916 Cecr2E9Q2Z1 1453 aa19.87■□□□□ 0.77
Ckap2-201ENSMUST00000046916 Frmpd1A2AKB4 1549 aa19.86■□□□□ 0.77
Ckap2-201ENSMUST00000046916 Phldb1Q6PDH0 1371 aaKnown RBP19.81■□□□□ 0.76
Ckap2-201ENSMUST00000046916 Cttnbp2B9EJA2 1648 aa19.73■□□□□ 0.75
Ckap2-201ENSMUST00000046916 Unc13aQ4KUS2 1712 aa19.7■□□□□ 0.74
Ckap2-201ENSMUST00000046916 CftrP26361 1476 aa19.58■□□□□ 0.73
Ckap2-201ENSMUST00000046916 Brd4Q9ESU6 1400 aaKnown RBP19.53■□□□□ 0.72
Ckap2-201ENSMUST00000046916 Mrc2Q64449 1479 aa19.52■□□□□ 0.71
Ckap2-201ENSMUST00000046916 Synj1Q8CHC4 1574 aa19.47■□□□□ 0.71
Ckap2-201ENSMUST00000046916 Ubl4bQ9CQ84 188 aa19.28■□□□□ 0.68
Ckap2-201ENSMUST00000046916 Lamc3Q9R0B6 1581 aa19.2■□□□□ 0.66
Ckap2-201ENSMUST00000046916 Rsf1E9PWW9 1441 aaKnown RBP19.11■□□□□ 0.65
Ckap2-201ENSMUST00000046916 Lrriq1Q0P5X1 1673 aa19.09■□□□□ 0.65
Ckap2-201ENSMUST00000046916 TnnQ80Z71 1560 aa19.03■□□□□ 0.64
Ckap2-201ENSMUST00000046916 Kif21aQ9QXL2 1672 aa18.99■□□□□ 0.63
Ckap2-201ENSMUST00000046916 Cux2P70298 1426 aa18.98■□□□□ 0.63
Ckap2-201ENSMUST00000046916 Eif4g3Q80XI3 1579 aaKnown RBP18.98■□□□□ 0.63
Ckap2-201ENSMUST00000046916 Top2bQ64511 1612 aa18.93■□□□□ 0.62
Ckap2-201ENSMUST00000046916 Kif15Q6P9L6 1387 aa18.91■□□□□ 0.62
Ckap2-201ENSMUST00000046916 Trim41Q5NCC3 630 aa18.89■□□□□ 0.61
Ckap2-201ENSMUST00000046916 Cep164Q5DU05 1446 aa18.83■□□□□ 0.61
Ckap2-201ENSMUST00000046916 Shroom2A2ALU4 1481 aa18.82■□□□□ 0.6
Ckap2-201ENSMUST00000046916 Golga3P55937 1487 aa18.76■□□□□ 0.59
Ckap2-201ENSMUST00000046916 Camsap1A2AHC3 1581 aa18.73■□□□□ 0.59
Ckap2-201ENSMUST00000046916 Ccdc18Q640L5 1455 aa18.73■□□□□ 0.59
Ckap2-201ENSMUST00000046916 Esf1Q3V1V3 845 aaKnown RBP18.7■□□□□ 0.58
Ckap2-201ENSMUST00000046916 Dnajc5P60904 198 aa18.7■□□□□ 0.58
Ckap2-201ENSMUST00000046916 Ccdc136Q3TVA9 1136 aa18.69■□□□□ 0.58
Ckap2-201ENSMUST00000046916 Crocc2F6XLV1 1638 aa18.67■□□□□ 0.58
Ckap2-201ENSMUST00000046916 Urb2E9Q7L1 1524 aaKnown RBP18.66■□□□□ 0.58
Ckap2-201ENSMUST00000046916 Fmn1Q05860 1466 aa18.66■□□□□ 0.58
Ckap2-201ENSMUST00000046916 Rpgrip1Q9EPQ2 1331 aa18.64■□□□□ 0.58
Ckap2-201ENSMUST00000046916 Pbrm1Q8BSQ9 1634 aaKnown RBP18.64■□□□□ 0.57
Ckap2-201ENSMUST00000046916 Ift140E9PY46 1464 aa18.62■□□□□ 0.57
Ckap2-201ENSMUST00000046916 Npm1Q61937 292 aaKnown RBP18.62■□□□□ 0.57
Ckap2-201ENSMUST00000046916 Gpatch8A2A6A1 1505 aa18.61■□□□□ 0.57
Ckap2-201ENSMUST00000046916 LrpprcQ6PB66 1392 aaKnown RBP18.6■□□□□ 0.57
Ckap2-201ENSMUST00000046916 Dhx29Q6PGC1 1365 aaKnown RBP18.59■□□□□ 0.57
Ckap2-201ENSMUST00000046916 Rusc2Q80U22 1514 aa18.58■□□□□ 0.56
Ckap2-201ENSMUST00000046916 PogzQ8BZH4 1409 aaKnown RBP18.57■□□□□ 0.56
Ckap2-201ENSMUST00000046916 Plb1Q3TTY0 1478 aa18.54■□□□□ 0.56
Ckap2-201ENSMUST00000046916 Zcchc11B2RX14 1644 aaKnown RBP18.47■□□□□ 0.55
Ckap2-201ENSMUST00000046916 Grin2bQ01097 1482 aa18.43■□□□□ 0.54
Ckap2-201ENSMUST00000046916 HrcG5E8J6 738 aa18.42■□□□□ 0.54
Ckap2-201ENSMUST00000046916 Col17a1Q07563 1470 aa18.4■□□□□ 0.54
Ckap2-201ENSMUST00000046916 Duox2A2AQ99 1517 aa18.39■□□□□ 0.53
Ckap2-201ENSMUST00000046916 Nup160Q9Z0W3 1402 aaKnown RBP18.38■□□□□ 0.53
Ckap2-201ENSMUST00000046916 Efcab5A0JP43 1406 aa18.38■□□□□ 0.53
Ckap2-201ENSMUST00000046916 Cc2d2bA0A286YDU8 1405 aa18.36■□□□□ 0.53
Ckap2-201ENSMUST00000046916 Disp1Q3TDN0 1521 aa18.33■□□□□ 0.53
Ckap2-201ENSMUST00000046916 NrkQ9R0G8 1455 aa18.31■□□□□ 0.52
Ckap2-201ENSMUST00000046916 Setd1bQ8CFT2 1985 aa18.29■□□□□ 0.52
Ckap2-201ENSMUST00000046916 Top2aQ01320 1528 aaKnown RBP18.28■□□□□ 0.52
Ckap2-201ENSMUST00000046916 Samd9lQ69Z37 1561 aa18.27■□□□□ 0.52
Ckap2-201ENSMUST00000046916 AqrQ8CFQ3 1481 aaKnown RBP18.22■□□□□ 0.51
Ckap2-201ENSMUST00000046916 Pabpn1Q8CCS6 302 aaKnown RBP18.21■□□□□ 0.51
Ckap2-201ENSMUST00000046916 Magi3Q9EQJ9 1476 aa18.16■□□□□ 0.5
Ckap2-201ENSMUST00000046916 Shroom4Q1W617 1475 aa18.13■□□□□ 0.49
Ckap2-201ENSMUST00000046916 Grin2aP35436 1464 aa18.12■□□□□ 0.49
Ckap2-201ENSMUST00000046916 Acin1Q9JIX8 1338 aaKnown RBP18.11■□□□□ 0.49
Ckap2-201ENSMUST00000046916 Cngb1E1AZ71 1325 aa18.1■□□□□ 0.49
Ckap2-201ENSMUST00000046916 SynmQ70IV5 1561 aa18.09■□□□□ 0.49
Ckap2-201ENSMUST00000046916 Fgd6Q69ZL1 1399 aa18.06■□□□□ 0.48
Ckap2-201ENSMUST00000046916 Il27Q8K3I6 234 aa18.05■□□□□ 0.48
Ckap2-201ENSMUST00000046916 Pla2r1Q62028 1487 aa18.01■□□□□ 0.47
Ckap2-201ENSMUST00000046916 Ccdc88bQ4QRL3 1481 aa17.98■□□□□ 0.47
Ckap2-201ENSMUST00000046916 Cep170Q6A065 1588 aa17.97■□□□□ 0.47
Ckap2-201ENSMUST00000046916 Map3k4O08648 1597 aa17.96■□□□□ 0.47
Ckap2-201ENSMUST00000046916 Adgrl3Q80TS3 1537 aa17.96■□□□□ 0.47
Ckap2-201ENSMUST00000046916 Dnmt1P13864 1620 aaKnown RBP17.95■□□□□ 0.46
Ckap2-201ENSMUST00000046916 EprsQ8CGC7 1512 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms