RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 MOT2P34909 587 aaKnown RBP2.92□□□□□ -1.94
snR55snR55 MTH1P35198 433 aa2.92□□□□□ -1.94
snR55snR55 STU2P46675 888 aa2.92□□□□□ -1.94
snR55snR55 EEB1Q02891 456 aa2.92□□□□□ -1.94
snR55snR55 YMR206WQ03695 313 aa2.92□□□□□ -1.94
snR55snR55 NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
snR55snR55 YLL058WQ12198 575 aa2.92□□□□□ -1.94
snR55snR55 TRP4P07285 380 aaPredicted RBP2.91□□□□□ -1.94
snR55snR55 INO1P11986 533 aa2.91□□□□□ -1.94
snR55snR55 ATE1P16639 503 aa2.91□□□□□ -1.94
snR55snR55 RAD27P26793 382 aa2.91□□□□□ -1.94
snR55snR55 FUN30P31380 1131 aa2.91□□□□□ -1.94
snR55snR55 YJR107WP47145 328 aa2.91□□□□□ -1.94
snR55snR55 ERG5P54781 538 aa2.91□□□□□ -1.94
snR55snR55 UPC2Q12151 913 aa2.91□□□□□ -1.94
snR55snR55 CAD1P24813 409 aaKnown RBP2.9□□□□□ -1.95
snR55snR55 STE14P32584 239 aa2.9□□□□□ -1.95
snR55snR55 PSP2P50109 593 aaKnown RBP2.9□□□□□ -1.95
snR55snR55 GND2P53319 492 aa2.9□□□□□ -1.95
snR55snR55 SFB2P53953 876 aa2.9□□□□□ -1.95
snR55snR55 ACF2Q12168 779 aa2.9□□□□□ -1.95
snR55snR55 ATG19P35193 415 aa2.89□□□□□ -1.95
snR55snR55 YGL176CP46945 554 aa2.89□□□□□ -1.95
snR55snR55 ESF1Q06344 628 aaKnown RBP2.89□□□□□ -1.95
snR55snR55 TMA46Q12000 345 aaKnown RBP2.89□□□□□ -1.95
snR55snR55 RKM4Q12504 494 aa2.89□□□□□ -1.95
snR55snR55 PPR1P07272 904 aaPredicted RBP2.88□□□□□ -1.95
snR55snR55 SPC42P36094 363 aa2.88□□□□□ -1.95
snR55snR55 RNT1Q02555 471 aa2.88□□□□□ -1.95
snR55snR55 RRP15Q06511 250 aaPredicted RBP2.88□□□□□ -1.95
snR55snR55 ALG7P07286 448 aa2.87□□□□□ -1.95
snR55snR55 YKL107WP34251 309 aa2.87□□□□□ -1.95
snR55snR55 SDS3P40505 327 aa2.87□□□□□ -1.95
snR55snR55 POL32P47110 350 aa2.87□□□□□ -1.95
snR55snR55 TYW3P53177 273 aa2.87□□□□□ -1.95
snR55snR55 MSL5Q12186 476 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
snR55snR55 SUT2Q12286 268 aa2.87□□□□□ -1.95
snR55snR55 NDJ1Q12366 352 aa2.87□□□□□ -1.95
snR55snR55 MGE1P38523 228 aa2.86□□□□□ -1.95
snR55snR55 TIM44Q01852 431 aa2.86□□□□□ -1.95
snR55snR55 ESC2Q06340 456 aa2.86□□□□□ -1.95
snR55snR55 CDC34P14682 295 aa2.85□□□□□ -1.95
snR55snR55 CDC12P32468 407 aaKnown RBP2.85□□□□□ -1.95
snR55snR55 PEX2P32800 271 aa2.85□□□□□ -1.95
snR55snR55 SAH1P39954 449 aaKnown RBP2.85□□□□□ -1.95
snR55snR55 YLR225CQ05948 407 aaKnown RBP2.85□□□□□ -1.95
snR55snR55 BNR1P40450 1375 aa2.85□□□□□ -1.95
snR55snR55 SED4P25365 1065 aa2.84□□□□□ -1.95
snR55snR55 SEC21P32074 935 aaKnown RBP2.84□□□□□ -1.95
snR55snR55 MET10P39692 1035 aa2.84□□□□□ -1.95
snR55snR55 YER158CP40095 573 aa2.84□□□□□ -1.95
snR55snR55 RPC82P32349 654 aa2.83□□□□□ -1.96
snR55snR55 PPS1P38148 807 aa2.83□□□□□ -1.96
snR55snR55 RAI1P53063 387 aaKnown RBP2.83□□□□□ -1.96
snR55snR55 MRH1Q12117 320 aaPredicted RBP2.83□□□□□ -1.96
snR55snR55 GYP7P48365 746 aa2.82□□□□□ -1.96
snR55snR55 FRE5Q08908 694 aa2.82□□□□□ -1.96
snR55snR55 FBP1P09201 348 aa2.81□□□□□ -1.96
snR55snR55 MDM10P18409 493 aa2.81□□□□□ -1.96
snR55snR55 FLO10P36170 1169 aa2.81□□□□□ -1.96
snR55snR55 TSL1P38427 1098 aaKnown RBP2.81□□□□□ -1.96
snR55snR55 YKE2P52553 114 aa2.81□□□□□ -1.96
snR55snR55 RMD1Q03441 430 aa2.81□□□□□ -1.96
snR55snR55 SSL1Q04673 461 aaPredicted RBP2.81□□□□□ -1.96
snR55snR55 HBT1Q07653 1046 aaKnown RBP2.81□□□□□ -1.96
snR55snR55 TUB3P09734 445 aaKnown RBP2.8□□□□□ -1.96
snR55snR55 NPP1P25353 742 aa2.8□□□□□ -1.96
snR55snR55 ABD1P32783 436 aaPredicted RBP2.8□□□□□ -1.96
snR55snR55 CTF13P35203 478 aa2.8□□□□□ -1.96
snR55snR55 YBR238CP38330 731 aaKnown RBP2.8□□□□□ -1.96
snR55snR55 YHL017WP38745 532 aa2.8□□□□□ -1.96
snR55snR55 MBP1P39678 833 aa2.8□□□□□ -1.96
snR55snR55 SPO20Q04359 397 aa2.8□□□□□ -1.96
snR55snR55 PEX19Q07418 342 aa2.8□□□□□ -1.96
snR55snR55 NOT3P06102 836 aaKnown RBP2.79□□□□□ -1.96
snR55snR55 AFR1P33304 620 aa2.79□□□□□ -1.96
snR55snR55 PET112P33893 541 aa2.79□□□□□ -1.96
snR55snR55 PIN4P34217 668 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
snR55snR55 YKR078WP36158 585 aaKnown RBP2.79□□□□□ -1.96
snR55snR55 TDP1P38319 544 aa2.79□□□□□ -1.96
snR55snR55 ELO3P40319 345 aa2.79□□□□□ -1.96
snR55snR55 IMO32P53219 342 aa2.79□□□□□ -1.96
snR55snR55 YGR053CP53234 283 aa2.79□□□□□ -1.96
snR55snR55 MRPS35P53292 345 aa2.79□□□□□ -1.96
snR55snR55 SRP1Q02821 542 aaKnown RBP2.79□□□□□ -1.96
snR55snR55 ADY4Q05955 493 aa2.79□□□□□ -1.96
snR55snR55 DUS3Q06053 668 aaKnown RBP2.79□□□□□ -1.96
snR55snR55 YPR196WQ06595 470 aa2.79□□□□□ -1.96
snR55snR55 PPZ2P33329 710 aa2.78□□□□□ -1.96
snR55snR55 STE13P33894 931 aa2.78□□□□□ -1.96
snR55snR55 SLD2P34252 453 aa2.78□□□□□ -1.96
snR55snR55 RIX1P38883 763 aaPredicted RBP2.78□□□□□ -1.96
snR55snR55 SDP1P40479 209 aa2.78□□□□□ -1.96
snR55snR55 TAH11P47112 604 aa2.78□□□□□ -1.96
snR55snR55 AFT2Q08957 416 aa2.78□□□□□ -1.96
snR55snR55 PRP4P20053 465 aaKnown RBP2.77□□□□□ -1.97
snR55snR55 RPD3P32561 433 aa2.77□□□□□ -1.97
snR55snR55 CTF8P38877 133 aa2.77□□□□□ -1.97
snR55snR55 GUS1P46655 708 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97not detected
snR55snR55 FAA4P47912 694 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms