RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR54, Length 86 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR54	snR54	NPP1	P25353	742 aa		4.14	□□□□□ -1.75
snR54	snR54	STE5	P32917	917 aa		4.14	□□□□□ -1.75
snR54	snR54	PAM1	P37304	830 aa	Known RBP	4.14	□□□□□ -1.75
snR54	snR54	CCC2	P38995	1004 aa		4.14	□□□□□ -1.75
snR54	snR54	KRI1	P42846	591 aa	Known RBP	4.14	□□□□□ -1.75
snR54	snR54	NTO1	Q12311	748 aa		4.14	□□□□□ -1.75
snR54	snR54	PPH3	P32345	308 aa		4.13	□□□□□ -1.75
snR54	snR54	AFR1	P33304	620 aa		4.13	□□□□□ -1.75
snR54	snR54	TRM2	P33753	639 aa		4.13	□□□□□ -1.75
snR54	snR54	ERT1	P38140	529 aa		4.13	□□□□□ -1.75
snR54	snR54	TSL1	P38427	1098 aa	Known RBP	4.13	□□□□□ -1.75
snR54	snR54	SPF1	P39986	1215 aa	Known RBP	4.13	□□□□□ -1.75
snR54	snR54	YER158C	P40095	573 aa		4.13	□□□□□ -1.75
snR54	snR54	GSF2	Q04697	403 aa	Known RBP	4.13	□□□□□ -1.75
snR54	snR54	TDA5	Q06417	326 aa	Known RBP	4.13	□□□□□ -1.75
snR54	snR54	YPR196W	Q06595	470 aa		4.13	□□□□□ -1.75
snR54	snR54	KCS1	Q12494	1050 aa		4.13	□□□□□ -1.75
snR54	snR54	PMA1	P05030	918 aa	Known RBP	4.12	□□□□□ -1.75
snR54	snR54	HSF1	P10961	833 aa		4.12	□□□□□ -1.75
snR54	snR54	MRP8	P35719	219 aa		4.12	□□□□□ -1.75
snR54	snR54	CHA4	P43634	648 aa		4.12	□□□□□ -1.75
snR54	snR54	GYP7	P48365	746 aa		4.12	□□□□□ -1.75
snR54	snR54	PSP2	P50109	593 aa	Known RBP	4.12	□□□□□ -1.75
snR54	snR54	SUN4	P53616	420 aa		4.12	□□□□□ -1.75
snR54	snR54	AAR2	P32357	355 aa	Predicted RBP	4.11	□□□□□ -1.75
snR54	snR54	DCG1	P32460	244 aa		4.11	□□□□□ -1.75
snR54	snR54	MSE1	P48525	536 aa		4.11	□□□□□ -1.75
snR54	snR54	PUS9	Q12069	462 aa		4.11	□□□□□ -1.75
snR54	snR54	NPC2	Q12408	173 aa		4.11	□□□□□ -1.75
snR54	snR54	PBY1	P38254	753 aa		4.1	□□□□□ -1.75
snR54	snR54	YBR184W	P38299	523 aa		4.1	□□□□□ -1.75
snR54	snR54	IRR1	P40541	1150 aa		4.1	□□□□□ -1.75
snR54	snR54	AIM21	P40563	679 aa		4.1	□□□□□ -1.75
snR54	snR54	PFD1	P46988	109 aa		4.1	□□□□□ -1.75
snR54	snR54	EXG2	P52911	562 aa		4.1	□□□□□ -1.75
snR54	snR54	SLI1	P53304	468 aa		4.1	□□□□□ -1.75
snR54	snR54	KIN4	Q01919	800 aa		4.1	□□□□□ -1.75
snR54	snR54	SSF2	Q12153	453 aa	Predicted RBP	4.1	□□□□□ -1.75
snR54	snR54	PNS1	Q12412	539 aa		4.1	□□□□□ -1.75
snR54	snR54	PMI40	P29952	429 aa	Known RBP	4.09	□□□□□ -1.75
snR54	snR54	HBS1	P32769	611 aa	Known RBP	4.09	□□□□□ -1.75
snR54	snR54	YRO2	P38079	344 aa		4.09	□□□□□ -1.75
snR54	snR54	MSS4	P38994	779 aa		4.09	□□□□□ -1.75
snR54	snR54	URM1	P40554	99 aa	Predicted RBP	4.09	□□□□□ -1.75
snR54	snR54	RAI1	P53063	387 aa	Known RBP	4.09	□□□□□ -1.75
snR54	snR54	NCS6	P53088	359 aa		4.09	□□□□□ -1.75
snR54	snR54	LAS17	Q12446	633 aa		4.09	□□□□□ -1.75
snR54	snR54	RPP2A	P05319	106 aa	Known RBP	4.08	□□□□□ -1.76
snR54	snR54	NOT3	P06102	836 aa	Known RBP	4.08	□□□□□ -1.76
snR54	snR54	CDC48	P25694	835 aa	Known RBP	4.08	□□□□□ -1.76
snR54	snR54	DEF1	P35732	738 aa	Known RBP	4.08	□□□□□ -1.76
snR54	snR54	YKR078W	P36158	585 aa	Known RBP	4.08	□□□□□ -1.76
snR54	snR54	ADE8	P04161	214 aa		4.07	□□□□□ -1.76
snR54	snR54	PFK1	P16861	987 aa	Known RBP	4.07	□□□□□ -1.76
snR54	snR54	GRX1	P25373	110 aa	Known RBP	4.07	□□□□□ -1.76
snR54	snR54	RPC82	P32349	654 aa		4.07	□□□□□ -1.76
snR54	snR54	RPD3	P32561	433 aa		4.07	□□□□□ -1.76
snR54	snR54	SIT1	P39980	628 aa		4.07	□□□□□ -1.76
snR54	snR54	ALR2	P43553	858 aa		4.07	□□□□□ -1.76
snR54	snR54	YKE2	P52553	114 aa		4.07	□□□□□ -1.76
snR54	snR54	BUL2	Q03758	920 aa	Known RBP	4.07	□□□□□ -1.76
snR54	snR54	SSL1	Q04673	461 aa	Predicted RBP	4.07	□□□□□ -1.76
snR54	snR54	UPC2	Q12151	913 aa		4.07	□□□□□ -1.76
snR54	snR54	PRP9	P19736	530 aa	Known RBP	4.06	□□□□□ -1.76
snR54	snR54	KAR4	P25583	335 aa		4.06	□□□□□ -1.76
snR54	snR54	HRR25	P29295	494 aa	Known RBP	4.06	□□□□□ -1.76
snR54	snR54	ATG19	P35193	415 aa		4.06	□□□□□ -1.76
snR54	snR54	YBR284W	P38150	797 aa		4.06	□□□□□ -1.76
snR54	snR54	TOK1	P40310	691 aa		4.06	□□□□□ -1.76
snR54	snR54	UBX5	Q06682	500 aa		4.06	□□□□□ -1.76
snR54	snR54	FMP25	Q08023	583 aa		4.06	□□□□□ -1.76
snR54	snR54	WRS1	Q12109	432 aa	Known RBP	4.06	□□□□□ -1.76
snR54	snR54	CAD1	P24813	409 aa	Known RBP	4.05	□□□□□ -1.76
snR54	snR54	YBR238C	P38330	731 aa	Known RBP	4.05	□□□□□ -1.76
snR54	snR54	IOC3	P43596	787 aa		4.05	□□□□□ -1.76
snR54	snR54	TPO2	P53283	614 aa		4.05	□□□□□ -1.76
snR54	snR54	YPR071W	Q12346	211 aa		4.05	□□□□□ -1.76
snR54	snR54	STE14	P32584	239 aa		4.04	□□□□□ -1.76
snR54	snR54	STE13	P33894	931 aa		4.04	□□□□□ -1.76
snR54	snR54	CHS7	P38843	316 aa		4.04	□□□□□ -1.76
snR54	snR54	BUL1	P48524	976 aa		4.04	□□□□□ -1.76
snR54	snR54	SED4	P25365	1065 aa		4.03	□□□□□ -1.76
snR54	snR54	RPL8B	P29453	256 aa	Known RBP	4.03	□□□□□ -1.76
snR54	snR54	SLU7	Q02775	382 aa	Known RBP	4.03	□□□□□ -1.76
snR54	snR54	NAN1	Q02931	896 aa	Known RBP	4.03	□□□□□ -1.76
snR54	snR54	LCD1	Q04377	747 aa		4.03	□□□□□ -1.76
snR54	snR54	EAF1	Q06337	982 aa		4.03	□□□□□ -1.76
snR54	snR54	RAD4	P14736	754 aa		4.02	□□□□□ -1.77
snR54	snR54	MSD1	P15179	658 aa	Known RBP	4.02	□□□□□ -1.77
snR54	snR54	RFA1	P22336	621 aa	Known RBP	4.02	□□□□□ -1.77
snR54	snR54	YIL108W	P40483	696 aa	Known RBP	4.02	□□□□□ -1.77
snR54	snR54	CCM1	P48237	864 aa	Predicted RBP	4.02	□□□□□ -1.77
snR54	snR54	UTP8	P53276	713 aa	Known RBP	4.02	□□□□□ -1.77
snR54	snR54	AIM39	Q08223	395 aa		4.02	□□□□□ -1.77
snR54	snR54	ENB1	Q08299	606 aa		4.02	□□□□□ -1.77
snR54	snR54	HBN1	Q96VH4	193 aa		4.02	□□□□□ -1.77
snR54	snR54	TOP3	P13099	656 aa		4.01	□□□□□ -1.77
snR54	snR54	ARE1	P25628	610 aa		4.01	□□□□□ -1.77
snR54	snR54	REC104	P33323	182 aa		4.01	□□□□□ -1.77
snR54	snR54	CEP3	P40969	608 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms