RNA–Protein interactions for RNA: YPL147W

PXA1, Transcript of Subunit of a heterodimeric peroxisomal ABC transport complex, yeast

Gene PXA1, Length 2,613 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXA1	YPL147W	SFB2	P53953	876 aa		5.28	□□□□□ -1.56
PXA1	YPL147W	YOL087C	Q99247	1116 aa		5.28	□□□□□ -1.56
PXA1	YPL147W	VMA2	P16140	517 aa	Known RBP	5.28	□□□□□ -1.56
PXA1	YPL147W	AFR1	P33304	620 aa		5.28	□□□□□ -1.56
PXA1	YPL147W	CUE2	P36075	443 aa	Known RBP	5.28	□□□□□ -1.56
PXA1	YPL147W	MED8	P38304	223 aa		5.28	□□□□□ -1.56
PXA1	YPL147W	FTH1	P38310	465 aa		5.28	□□□□□ -1.56
PXA1	YPL147W	SSZ1	P38788	538 aa	Known RBP	5.28	□□□□□ -1.56
PXA1	YPL147W	VPS45	P38932	577 aa		5.28	□□□□□ -1.56
PXA1	YPL147W	TOK1	P40310	691 aa		5.28	□□□□□ -1.56
PXA1	YPL147W	ALA1	P40825	983 aa	Known RBP	5.28	□□□□□ -1.56
PXA1	YPL147W	SUM1	P46676	1062 aa		5.28	□□□□□ -1.56
PXA1	YPL147W	CCT8	P47079	568 aa	Known RBP	5.28	□□□□□ -1.56
PXA1	YPL147W	FOL2	P51601	243 aa	Known RBP	5.28	□□□□□ -1.56
PXA1	YPL147W	RBA50	Q04418	439 aa		5.28	□□□□□ -1.56
PXA1	YPL147W	NEW1	Q08972	1196 aa	Known RBP	5.28	□□□□□ -1.56
PXA1	YPL147W	SMF3	Q12078	473 aa	Predicted RBP	5.28	□□□□□ -1.56
PXA1	YPL147W	RAD50	P12753	1312 aa		5.28	□□□□□ -1.56
PXA1	YPL147W	MST1	P07236	462 aa		5.27	□□□□□ -1.57
PXA1	YPL147W	CDC16	P09798	840 aa		5.27	□□□□□ -1.57
PXA1	YPL147W	MSS116	P15424	664 aa	Known RBP	5.27	□□□□□ -1.57
PXA1	YPL147W	SEC2	P17065	759 aa		5.27	□□□□□ -1.57
PXA1	YPL147W	REC107	P21651	314 aa		5.27	□□□□□ -1.57
PXA1	YPL147W	OXP1	P28273	1286 aa		5.27	□□□□□ -1.57
PXA1	YPL147W	DAL1	P32375	460 aa		5.27	□□□□□ -1.57
PXA1	YPL147W	PLC1	P32383	869 aa		5.27	□□□□□ -1.57
PXA1	YPL147W	DED81	P38707	554 aa	Known RBP	5.27	□□□□□ -1.57
PXA1	YPL147W	GCD14	P46959	383 aa	Predicted RBP	5.27	□□□□□ -1.57
PXA1	YPL147W	RSC58	Q07979	502 aa		5.27	□□□□□ -1.57
PXA1	YPL147W	XRS2	P33301	854 aa		5.27	□□□□□ -1.57
PXA1	YPL147W	YRO2	P38079	344 aa		5.27	□□□□□ -1.57
PXA1	YPL147W	SMC2	P38989	1170 aa	Known RBP	5.27	□□□□□ -1.57
PXA1	YPL147W	YGR153W	P48238	217 aa		5.27	□□□□□ -1.57
PXA1	YPL147W	IST1	P53843	298 aa	Predicted RBP	5.27	□□□□□ -1.57
PXA1	YPL147W	ARP5	P53946	755 aa		5.27	□□□□□ -1.57
PXA1	YPL147W	PKH3	Q03306	898 aa	Predicted RBP	5.27	□□□□□ -1.57
PXA1	YPL147W	VPS16	Q03308	798 aa		5.27	□□□□□ -1.57
PXA1	YPL147W	VPS3	P23643	1011 aa		5.27	□□□□□ -1.57
PXA1	YPL147W	DBP1	P24784	617 aa	Known RBP	5.27	□□□□□ -1.57
PXA1	YPL147W	CDC48	P25694	835 aa	Known RBP	5.27	□□□□□ -1.57
PXA1	YPL147W	NIP1	P32497	812 aa	Known RBP	5.27	□□□□□ -1.57
PXA1	YPL147W	TIM23	P32897	222 aa		5.27	□□□□□ -1.57
PXA1	YPL147W	YKL133C	P36066	463 aa		5.27	□□□□□ -1.57
PXA1	YPL147W	ERC1	P38767	581 aa		5.27	□□□□□ -1.57
PXA1	YPL147W	XKS1	P42826	600 aa		5.27	□□□□□ -1.57
PXA1	YPL147W	ROG3	P43602	733 aa		5.27	□□□□□ -1.57
PXA1	YPL147W	VTC4	P47075	721 aa		5.27	□□□□□ -1.57
PXA1	YPL147W	PAP2	P53632	584 aa	Known RBP	5.27	□□□□□ -1.57
PXA1	YPL147W	CEG1	Q01159	459 aa	Predicted RBP	5.27	□□□□□ -1.57
PXA1	YPL147W	YDR090C	Q03193	310 aa		5.27	□□□□□ -1.57
PXA1	YPL147W	ADY3	Q07732	790 aa		5.27	□□□□□ -1.57
PXA1	YPL147W	MLH2	Q07980	695 aa		5.27	□□□□□ -1.57
PXA1	YPL147W	RRP5	Q05022	1729 aa	Known RBP	5.26	□□□□□ -1.57
PXA1	YPL147W	NUP145	P49687	1317 aa		5.26	□□□□□ -1.57
PXA1	YPL147W	HAP4	P14064	554 aa		5.26	□□□□□ -1.57
PXA1	YPL147W	CDC10	P25342	322 aa	Known RBP	5.26	□□□□□ -1.57
PXA1	YPL147W	RAM2	P29703	316 aa		5.26	□□□□□ -1.57
PXA1	YPL147W	EUG1	P32474	517 aa		5.26	□□□□□ -1.57
PXA1	YPL147W	TRZ1	P36159	838 aa	Predicted RBP	5.26	□□□□□ -1.57
PXA1	YPL147W	RIM4	P38741	713 aa		5.26	□□□□□ -1.57
PXA1	YPL147W	SGM1	P47166	707 aa		5.26	□□□□□ -1.57
PXA1	YPL147W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.26	□□□□□ -1.57	not detected
PXA1	YPL147W	TRM8	Q12009	286 aa		5.26	□□□□□ -1.57
PXA1	YPL147W	MNL2	Q12205	849 aa		5.26	□□□□□ -1.57
PXA1	YPL147W	CIT1	P00890	479 aa		5.26	□□□□□ -1.57
PXA1	YPL147W	CTT1	P06115	562 aa		5.26	□□□□□ -1.57
PXA1	YPL147W	SST2	P11972	698 aa	Known RBP	5.26	□□□□□ -1.57
PXA1	YPL147W	GRR1	P24814	1151 aa		5.26	□□□□□ -1.57
PXA1	YPL147W	LCB1	P25045	558 aa	Known RBP	5.26	□□□□□ -1.57
PXA1	YPL147W	POL4	P25615	582 aa		5.26	□□□□□ -1.57
PXA1	YPL147W	RPN2	P32565	945 aa	Known RBP	5.26	□□□□□ -1.57
PXA1	YPL147W	YEL1	P34225	687 aa		5.26	□□□□□ -1.57
PXA1	YPL147W	BOI1	P38041	980 aa	Known RBP	5.26	□□□□□ -1.57
PXA1	YPL147W	KIC1	P38692	1080 aa		5.26	□□□□□ -1.57
PXA1	YPL147W	MPH1	P40562	993 aa		5.26	□□□□□ -1.57
PXA1	YPL147W	SNX4	P47057	423 aa		5.26	□□□□□ -1.57
PXA1	YPL147W	YJR107W	P47145	328 aa		5.26	□□□□□ -1.57
PXA1	YPL147W	YNR029C	P53729	429 aa	Known RBP	5.26	□□□□□ -1.57
PXA1	YPL147W	YML131W	Q03102	365 aa		5.26	□□□□□ -1.57
PXA1	YPL147W	WHI5	Q12416	295 aa		5.26	□□□□□ -1.57
PXA1	YPL147W	CET1	O13297	549 aa	Predicted RBP	5.25	□□□□□ -1.57
PXA1	YPL147W	FUR4	P05316	633 aa	Known RBP	5.25	□□□□□ -1.57
PXA1	YPL147W	DBF4	P32325	704 aa		5.25	□□□□□ -1.57
PXA1	YPL147W	PEP7	P32609	515 aa		5.25	□□□□□ -1.57
PXA1	YPL147W	RSM22	P36056	628 aa		5.25	□□□□□ -1.57
PXA1	YPL147W	GPP1	P41277	250 aa	Known RBP	5.25	□□□□□ -1.57
PXA1	YPL147W	REF2	P42073	533 aa	Predicted RBP	5.25	□□□□□ -1.57
PXA1	YPL147W	ISW2	Q08773	1120 aa		5.25	□□□□□ -1.57
PXA1	YPL147W	PIN2	Q12057	282 aa		5.25	□□□□□ -1.57
PXA1	YPL147W	REX3	Q12090	404 aa		5.25	□□□□□ -1.57
PXA1	YPL147W	SEC39	Q12745	709 aa		5.25	□□□□□ -1.57
PXA1	YPL147W	ASF2	P32448	525 aa	Predicted RBP	5.25	□□□□□ -1.57
PXA1	YPL147W	YKT6	P36015	200 aa	Known RBP	5.25	□□□□□ -1.57
PXA1	YPL147W	EAP1	P36041	632 aa	Known RBP	5.25	□□□□□ -1.57
PXA1	YPL147W	PXL1	P36166	706 aa		5.25	□□□□□ -1.57
PXA1	YPL147W	ECM1	P39715	212 aa		5.25	□□□□□ -1.57
PXA1	YPL147W	MTW1	P39731	289 aa		5.25	□□□□□ -1.57
PXA1	YPL147W	PHB1	P40961	287 aa		5.25	□□□□□ -1.57
PXA1	YPL147W	SEC26	P41810	973 aa	Known RBP	5.25	□□□□□ -1.57
PXA1	YPL147W	BBC1	P47068	1157 aa		5.25	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms