RNA–Protein interactions for RNA: YPL056C

LCL1, Transcript of Putative protein of unknown function, yeast

Gene LCL1, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCL1	YPL056C	DDP1	Q99321	188 aa	Known RBP	2.85	□□□□□ -1.95
LCL1	YPL056C	PGK1	P00560	416 aa	Known RBP	2.84	□□□□□ -1.95
LCL1	YPL056C	RAD1	P06777	1100 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	RPS24A	P0CX31	135 aa	Known RBP	2.84	□□□□□ -1.95
LCL1	YPL056C	RPS24B	P0CX32	135 aa	Known RBP	2.84	□□□□□ -1.95
LCL1	YPL056C	VPS1	P21576	704 aa	Known RBP	2.84	□□□□□ -1.95
LCL1	YPL056C	SCJ1	P25303	377 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	BUD23	P25627	275 aa	Predicted RBP	2.84	□□□□□ -1.95
LCL1	YPL056C	SCT1	P32784	759 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	SEC8	P32855	1065 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	NFU1	P32860	256 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	LOS1	P33418	1100 aa	Predicted RBP	2.84	□□□□□ -1.95
LCL1	YPL056C	STE13	P33894	931 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	PRX1	P34227	261 aa	Known RBP	2.84	□□□□□ -1.95
LCL1	YPL056C	PEX5	P35056	612 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	KES1	P35844	434 aa	Known RBP	2.84	□□□□□ -1.95
LCL1	YPL056C	CSE4	P36012	229 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	MRPL40	P36534	297 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	MUM2	P38236	366 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	IFA38	P38286	347 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	FZO1	P38297	855 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	YHR020W	P38708	688 aa	Known RBP	2.84	□□□□□ -1.95
LCL1	YPL056C	TDA11	P38854	504 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	BUD16	P39988	312 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	FCY21	P40039	528 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	FTR1	P40088	404 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	INA22	P40576	216 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	IOC3	P43596	787 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	ALG2	P43636	503 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	STB2	P46679	850 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	YJR008W	P47085	338 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	TMA22	P47089	198 aa	Predicted RBP	2.84	□□□□□ -1.95
LCL1	YPL056C	ZDS1	P50111	915 aa	Known RBP	2.84	□□□□□ -1.95
LCL1	YPL056C	ESF2	P53743	316 aa	Known RBP	2.84	□□□□□ -1.95
LCL1	YPL056C	RTC4	P53850	401 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	SQS1	P53866	767 aa	Known RBP	2.84	□□□□□ -1.95
LCL1	YPL056C	CIK1	Q01649	594 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	YPL109C	Q02981	657 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	MUB1	Q03162	620 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	WAR1	Q03631	944 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	YPQ2	Q06328	317 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	PMT7	Q06644	662 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	AVO1	Q08236	1176 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	MSH5	Q12175	901 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	SCM3	Q12334	223 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	CEX1	Q12453	761 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	RMP1	Q12530	201 aa		2.84	□□□□□ -1.95
LCL1	YPL056C	LSO2	Q3E772	92 aa	Known RBP	2.84	□□□□□ -1.95
LCL1	YPL056C	LAM4	P38800	1345 aa		2.84	□□□□□ -1.96
LCL1	YPL056C	LEU2	P04173	364 aa	Predicted RBP	2.83	□□□□□ -1.96
LCL1	YPL056C	TOM70	P07213	617 aa	Known RBP	2.83	□□□□□ -1.96
LCL1	YPL056C	YML002W	P0CF17	737 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	THR1	P17423	357 aa	Known RBP	2.83	□□□□□ -1.96
LCL1	YPL056C	RPA135	P22138	1203 aa	Known RBP	2.83	□□□□□ -1.96
LCL1	YPL056C	VAN1	P23642	535 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	PRD1	P25375	712 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	HSP30	P25619	332 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	MGM1	P32266	881 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	PLC1	P32383	869 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	AFG2	P32794	780 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	SSO1	P32867	290 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	SMY2	P32909	740 aa	Known RBP	2.83	□□□□□ -1.96
LCL1	YPL056C	DUR3	P33413	735 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	UTP11	P34247	250 aa	Predicted RBP	2.83	□□□□□ -1.96
LCL1	YPL056C	UIP5	P36137	443 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	TRZ1	P36159	838 aa	Predicted RBP	2.83	□□□□□ -1.96
LCL1	YPL056C	PXL1	P36166	706 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	GEF1	P37020	779 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	BOI1	P38041	980 aa	Known RBP	2.83	□□□□□ -1.96
LCL1	YPL056C	KIC1	P38692	1080 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	YHL012W	P38709	493 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	SIP3	P38717	1229 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	SET1	P38827	1080 aa	Known RBP	2.83	□□□□□ -1.96
LCL1	YPL056C	PEX18	P38855	283 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	KAP123	P40069	1113 aa	Known RBP	2.83	□□□□□ -1.96
LCL1	YPL056C	ATG3	P40344	310 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	FYV10	P40492	516 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	PHB1	P40961	287 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	GCD10	P41814	478 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	TFG2	P41896	400 aa	Predicted RBP	2.83	□□□□□ -1.96
LCL1	YPL056C	MET12	P46151	657 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	DAS1	P47005	663 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	SNX4	P47057	423 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	CCT8	P47079	568 aa	Known RBP	2.83	□□□□□ -1.96
LCL1	YPL056C	ATH1	P48016	1211 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	HFM1	P51979	1187 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	HOP2	P53187	214 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	ERP6	P53198	216 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	ELA1	P53861	379 aa	Predicted RBP	2.83	□□□□□ -1.96
LCL1	YPL056C	ALF1	P53904	254 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	SFB2	P53953	876 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	BOP3	P53958	396 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	ULP1	Q02724	621 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	RAT1	Q02792	1006 aa	Known RBP	2.83	□□□□□ -1.96
LCL1	YPL056C	SWP1	Q02795	286 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	TRS120	Q04183	1289 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	SPC24	Q04477	213 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	RRN11	Q04712	507 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	DCS1	Q06151	350 aa		2.83	□□□□□ -1.96
LCL1	YPL056C	MCP2	Q06567	569 aa		2.83	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms