RNA–Protein interactions for RNA: YPL054W

LEE1, Transcript of Zinc-finger protein of unknown function, yeast

Gene LEE1, Length 906 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEE1	YPL054W	MOH1	P38191	138 aa		4.46	□□□□□ -1.7
LEE1	YPL054W	SAH1	P39954	449 aa	Known RBP	4.46	□□□□□ -1.7
LEE1	YPL054W	URM1	P40554	99 aa	Predicted RBP	4.46	□□□□□ -1.7
LEE1	YPL054W	UBA2	P52488	636 aa		4.46	□□□□□ -1.7
LEE1	YPL054W	YML020W	Q03722	664 aa		4.46	□□□□□ -1.7
LEE1	YPL054W	GUP2	Q08929	609 aa		4.46	□□□□□ -1.7
LEE1	YPL054W	RPC82	P32349	654 aa		4.45	□□□□□ -1.7
LEE1	YPL054W	GIC1	P38785	314 aa		4.45	□□□□□ -1.7
LEE1	YPL054W	NCS6	P53088	359 aa		4.45	□□□□□ -1.7
LEE1	YPL054W	SRP1	Q02821	542 aa	Known RBP	4.45	□□□□□ -1.7
LEE1	YPL054W	YLR225C	Q05948	407 aa	Known RBP	4.45	□□□□□ -1.7
LEE1	YPL054W	EFT1	P32324	842 aa	Known RBP	4.44	□□□□□ -1.7
LEE1	YPL054W	YGR053C	P53234	283 aa		4.43	□□□□□ -1.7
LEE1	YPL054W	YML122C	Q03207	126 aa		4.43	□□□□□ -1.7
LEE1	YPL054W	NOP8	Q08287	484 aa	Predicted RBP	4.43	□□□□□ -1.7
LEE1	YPL054W	CAD1	P24813	409 aa	Known RBP	4.42	□□□□□ -1.7
LEE1	YPL054W	KAR4	P25583	335 aa		4.42	□□□□□ -1.7
LEE1	YPL054W	KTR4	P38131	464 aa		4.41	□□□□□ -1.7
LEE1	YPL054W	SUL1	P38359	859 aa		4.41	□□□□□ -1.7
LEE1	YPL054W	CDC12	P32468	407 aa	Known RBP	4.4	□□□□□ -1.71
LEE1	YPL054W	YPR196W	Q06595	470 aa		4.4	□□□□□ -1.71
LEE1	YPL054W	WHI4	Q07655	649 aa	Known RBP	4.4	□□□□□ -1.71
LEE1	YPL054W	YLR040C	Q07988	224 aa		4.4	□□□□□ -1.71
LEE1	YPL054W	YOL073C	Q08232	322 aa		4.4	□□□□□ -1.71
LEE1	YPL054W	LAS17	Q12446	633 aa		4.4	□□□□□ -1.71
LEE1	YPL054W	SFB2	P53953	876 aa		4.39	□□□□□ -1.71
LEE1	YPL054W	UPC2	Q12151	913 aa		4.39	□□□□□ -1.71
LEE1	YPL054W	SED4	P25365	1065 aa		4.38	□□□□□ -1.71
LEE1	YPL054W	SBA1	P28707	216 aa	Known RBP	4.38	□□□□□ -1.71
LEE1	YPL054W	ABD1	P32783	436 aa	Predicted RBP	4.38	□□□□□ -1.71
LEE1	YPL054W	YKR078W	P36158	585 aa	Known RBP	4.38	□□□□□ -1.71
LEE1	YPL054W	STU2	P46675	888 aa		4.38	□□□□□ -1.71
LEE1	YPL054W	GYP7	P48365	746 aa		4.38	□□□□□ -1.71
LEE1	YPL054W	RAI1	P53063	387 aa	Known RBP	4.38	□□□□□ -1.71
LEE1	YPL054W	GDE1	Q02979	1223 aa		4.38	□□□□□ -1.71
LEE1	YPL054W	DUS3	Q06053	668 aa	Known RBP	4.38	□□□□□ -1.71
LEE1	YPL054W	ESC2	Q06340	456 aa		4.38	□□□□□ -1.71
LEE1	YPL054W	TRP4	P07285	380 aa	Predicted RBP	4.37	□□□□□ -1.71
LEE1	YPL054W	CLN2	P20438	545 aa		4.37	□□□□□ -1.71
LEE1	YPL054W	NAP1	P25293	417 aa	Known RBP	4.37	□□□□□ -1.71
LEE1	YPL054W	ERG4	P25340	473 aa		4.37	□□□□□ -1.71
LEE1	YPL054W	AGP1	P25376	633 aa		4.37	□□□□□ -1.71
LEE1	YPL054W	NPP2	P39997	493 aa		4.37	□□□□□ -1.71
LEE1	YPL054W	YER158C	P40095	573 aa		4.37	□□□□□ -1.71
LEE1	YPL054W	FAA4	P47912	694 aa	Known RBP	4.37	□□□□□ -1.71
LEE1	YPL054W	BUL1	P48524	976 aa		4.37	□□□□□ -1.71
LEE1	YPL054W	TIM44	Q01852	431 aa		4.37	□□□□□ -1.71
LEE1	YPL054W	OMS1	Q06668	471 aa		4.37	□□□□□ -1.71
LEE1	YPL054W	MCH5	Q08777	521 aa		4.37	□□□□□ -1.71
LEE1	YPL054W	MBP1	P39678	833 aa		4.36	□□□□□ -1.71
LEE1	YPL054W	RNT1	Q02555	471 aa		4.36	□□□□□ -1.71
LEE1	YPL054W	FAL1	Q12099	399 aa	Known RBP	4.36	□□□□□ -1.71
LEE1	YPL054W	ACF2	Q12168	779 aa		4.36	□□□□□ -1.71
LEE1	YPL054W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
LEE1	YPL054W	VPS30	Q02948	557 aa		4.35	□□□□□ -1.71
LEE1	YPL054W	CDC48	P25694	835 aa	Known RBP	4.34	□□□□□ -1.71
LEE1	YPL054W	TMN2	Q04562	672 aa		4.34	□□□□□ -1.71
LEE1	YPL054W	TAF7	Q05021	590 aa		4.34	□□□□□ -1.71
LEE1	YPL054W	PPH3	P32345	308 aa		4.33	□□□□□ -1.72
LEE1	YPL054W	STE14	P32584	239 aa		4.33	□□□□□ -1.72
LEE1	YPL054W	TSL1	P38427	1098 aa	Known RBP	4.33	□□□□□ -1.72
LEE1	YPL054W	QRI1	P43123	477 aa	Known RBP	4.33	□□□□□ -1.72
LEE1	YPL054W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.33	□□□□□ -1.72	not detected
LEE1	YPL054W	STB4	P50104	949 aa		4.33	□□□□□ -1.72
LEE1	YPL054W	CWC24	P53769	259 aa		4.33	□□□□□ -1.72
LEE1	YPL054W	ADE8	P04161	214 aa		4.32	□□□□□ -1.72
LEE1	YPL054W	NOT3	P06102	836 aa	Known RBP	4.32	□□□□□ -1.72
LEE1	YPL054W	PPR1	P07272	904 aa	Predicted RBP	4.32	□□□□□ -1.72
LEE1	YPL054W	MAD1	P40957	749 aa		4.32	□□□□□ -1.72
LEE1	YPL054W	SHE9	Q04172	456 aa		4.32	□□□□□ -1.72
LEE1	YPL054W	YDR306C	Q06640	478 aa		4.32	□□□□□ -1.72
LEE1	YPL054W	ALG7	P07286	448 aa		4.31	□□□□□ -1.72
LEE1	YPL054W	VBA5	P36172	582 aa		4.31	□□□□□ -1.72
LEE1	YPL054W	YBR238C	P38330	731 aa	Known RBP	4.31	□□□□□ -1.72
LEE1	YPL054W	VPS16	Q03308	798 aa		4.31	□□□□□ -1.72
LEE1	YPL054W	YMR206W	Q03695	313 aa		4.31	□□□□□ -1.72
LEE1	YPL054W	PEX19	Q07418	342 aa		4.31	□□□□□ -1.72
LEE1	YPL054W	IRC10	Q08118	586 aa		4.31	□□□□□ -1.72
LEE1	YPL054W	STE13	P33894	931 aa		4.3	□□□□□ -1.72
LEE1	YPL054W	YKE2	P52553	114 aa		4.3	□□□□□ -1.72
LEE1	YPL054W	TPO2	P53283	614 aa		4.3	□□□□□ -1.72
LEE1	YPL054W	AAR2	P32357	355 aa	Predicted RBP	4.29	□□□□□ -1.72
LEE1	YPL054W	SCT1	P32784	759 aa		4.29	□□□□□ -1.72
LEE1	YPL054W	ATF1	P40353	525 aa		4.29	□□□□□ -1.72
LEE1	YPL054W	OPI10	Q08202	246 aa		4.29	□□□□□ -1.72
LEE1	YPL054W	PIN2	Q12057	282 aa		4.29	□□□□□ -1.72
LEE1	YPL054W	SDP1	P40479	209 aa		4.28	□□□□□ -1.72
LEE1	YPL054W	SLU7	Q02775	382 aa	Known RBP	4.28	□□□□□ -1.72
LEE1	YPL054W	SSL1	Q04673	461 aa	Predicted RBP	4.28	□□□□□ -1.72
LEE1	YPL054W	SVF1	Q05515	481 aa		4.28	□□□□□ -1.72
LEE1	YPL054W	MET3	P08536	511 aa		4.27	□□□□□ -1.73
LEE1	YPL054W	FBP1	P09201	348 aa		4.27	□□□□□ -1.73
LEE1	YPL054W	RFA1	P22336	621 aa	Known RBP	4.27	□□□□□ -1.73
LEE1	YPL054W	NPP1	P25353	742 aa		4.27	□□□□□ -1.73
LEE1	YPL054W	SEC21	P32074	935 aa	Known RBP	4.27	□□□□□ -1.73
LEE1	YPL054W	MTH1	P35198	433 aa		4.27	□□□□□ -1.73
LEE1	YPL054W	CTF13	P35203	478 aa		4.27	□□□□□ -1.73
LEE1	YPL054W	MRP8	P35719	219 aa		4.27	□□□□□ -1.73
LEE1	YPL054W	YRO2	P38079	344 aa		4.27	□□□□□ -1.73
LEE1	YPL054W	SIT1	P39980	628 aa		4.27	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 74.2 ms