RNA–Protein interactions for RNA: YPL040C

ISM1, Transcript of Mitochondrial isoleucyl-tRNA synthetase, yeast

Gene ISM1, Length 3,009 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ISM1	YPL040C	NBA1	Q08229	501 aa	Known RBP	4.08	□□□□□ -1.76
ISM1	YPL040C	RPS21A	P0C0V8	87 aa	Known RBP	4.08	□□□□□ -1.76
ISM1	YPL040C	TFA2	P36145	328 aa		4.08	□□□□□ -1.76
ISM1	YPL040C	JNM1	P36224	373 aa		4.08	□□□□□ -1.76
ISM1	YPL040C	EST2	Q06163	884 aa		4.08	□□□□□ -1.76
ISM1	YPL040C	RSC3	Q06639	885 aa		4.08	□□□□□ -1.76
ISM1	YPL040C	APM4	Q99186	491 aa		4.08	□□□□□ -1.76
ISM1	YPL040C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
ISM1	YPL040C	HTS1	P07263	546 aa	Known RBP	4.08	□□□□□ -1.76
ISM1	YPL040C	DBP2	P24783	546 aa	Known RBP	4.08	□□□□□ -1.76
ISM1	YPL040C	CCR4	P31384	837 aa	Known RBP	4.08	□□□□□ -1.76
ISM1	YPL040C	CAF120	P53836	1060 aa		4.08	□□□□□ -1.76
ISM1	YPL040C	GTR1	Q00582	310 aa		4.08	□□□□□ -1.76
ISM1	YPL040C	TAF11	Q04226	346 aa		4.08	□□□□□ -1.76
ISM1	YPL040C	FUS1	P11710	512 aa		4.07	□□□□□ -1.76
ISM1	YPL040C	HMG1	P12683	1054 aa		4.07	□□□□□ -1.76
ISM1	YPL040C	HOP1	P20050	605 aa		4.07	□□□□□ -1.76
ISM1	YPL040C	NPP1	P25353	742 aa		4.07	□□□□□ -1.76
ISM1	YPL040C	PET309	P32522	965 aa	Predicted RBP	4.07	□□□□□ -1.76
ISM1	YPL040C	SPT23	P35210	1082 aa		4.07	□□□□□ -1.76
ISM1	YPL040C	GRX3	Q03835	250 aa		4.07	□□□□□ -1.76
ISM1	YPL040C	ARA2	Q04212	335 aa		4.07	□□□□□ -1.76
ISM1	YPL040C	ECM38	Q05902	660 aa	Predicted RBP	4.07	□□□□□ -1.76
ISM1	YPL040C	YOL114C	Q12322	202 aa		4.07	□□□□□ -1.76
ISM1	YPL040C	LDB19	Q12502	818 aa		4.07	□□□□□ -1.76
ISM1	YPL040C	RMP1	Q12530	201 aa		4.07	□□□□□ -1.76
ISM1	YPL040C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
ISM1	YPL040C	COX11	P19516	300 aa	Known RBP	4.07	□□□□□ -1.76
ISM1	YPL040C	HOG1	P32485	435 aa		4.07	□□□□□ -1.76
ISM1	YPL040C	ADD66	P36040	267 aa		4.07	□□□□□ -1.76
ISM1	YPL040C	SHM2	P37291	469 aa	Known RBP	4.07	□□□□□ -1.76
ISM1	YPL040C	ECM2	P38241	364 aa	Known RBP	4.07	□□□□□ -1.76
ISM1	YPL040C	PNT1	P38969	423 aa		4.07	□□□□□ -1.76
ISM1	YPL040C	TMA108	P40462	946 aa		4.07	□□□□□ -1.76
ISM1	YPL040C	VTC2	P43585	828 aa		4.07	□□□□□ -1.76
ISM1	YPL040C	AIM14	P53109	570 aa		4.07	□□□□□ -1.76
ISM1	YPL040C	RKM2	Q03942	479 aa		4.07	□□□□□ -1.76
ISM1	YPL040C	LCD1	Q04377	747 aa		4.07	□□□□□ -1.76
ISM1	YPL040C	PGA3	Q12746	312 aa	Known RBP	4.07	□□□□□ -1.76
ISM1	YPL040C	MET8	P15807	274 aa		4.06	□□□□□ -1.76
ISM1	YPL040C	SPO16	P17122	198 aa		4.06	□□□□□ -1.76
ISM1	YPL040C	SMY2	P32909	740 aa	Known RBP	4.06	□□□□□ -1.76
ISM1	YPL040C	DHR2	P36009	735 aa	Predicted RBP	4.06	□□□□□ -1.76
ISM1	YPL040C	PTC2	P39966	464 aa	Known RBP	4.06	□□□□□ -1.76
ISM1	YPL040C	YGR250C	P53316	781 aa	Known RBP	4.06	□□□□□ -1.76
ISM1	YPL040C	BIO5	P53744	561 aa	Known RBP	4.06	□□□□□ -1.76
ISM1	YPL040C	SPN1	Q06505	410 aa	Predicted RBP	4.06	□□□□□ -1.76
ISM1	YPL040C	GUD1	Q07729	489 aa		4.06	□□□□□ -1.76
ISM1	YPL040C	PEX15	Q08215	383 aa		4.06	□□□□□ -1.76
ISM1	YPL040C	HFI1	Q12060	488 aa		4.06	□□□□□ -1.76
ISM1	YPL040C	GNT1	Q12096	491 aa		4.06	□□□□□ -1.76
ISM1	YPL040C	SCM3	Q12334	223 aa		4.06	□□□□□ -1.76
ISM1	YPL040C	TFC3	P34111	1160 aa		4.06	□□□□□ -1.76
ISM1	YPL040C	YKL151C	P36059	337 aa		4.06	□□□□□ -1.76
ISM1	YPL040C	DID4	P36108	232 aa		4.06	□□□□□ -1.76
ISM1	YPL040C	YGR016W	P53209	190 aa		4.06	□□□□□ -1.76
ISM1	YPL040C	YNR065C	P53751	1116 aa		4.06	□□□□□ -1.76
ISM1	YPL040C	SAS4	Q04003	481 aa		4.06	□□□□□ -1.76
ISM1	YPL040C	HLR1	Q04429	423 aa		4.06	□□□□□ -1.76
ISM1	YPL040C	RSC58	Q07979	502 aa		4.06	□□□□□ -1.76
ISM1	YPL040C	SAN1	P22470	610 aa		4.05	□□□□□ -1.76
ISM1	YPL040C	MDJ1	P35191	511 aa		4.05	□□□□□ -1.76
ISM1	YPL040C	DLD3	P39976	496 aa	Known RBP	4.05	□□□□□ -1.76
ISM1	YPL040C	TOK1	P40310	691 aa		4.05	□□□□□ -1.76
ISM1	YPL040C	SLS1	P42900	643 aa		4.05	□□□□□ -1.76
ISM1	YPL040C	ARC35	P53731	342 aa	Known RBP	4.05	□□□□□ -1.76
ISM1	YPL040C	SKY1	Q03656	742 aa		4.05	□□□□□ -1.76
ISM1	YPL040C	BI4	P03879	638 aa		4.05	□□□□□ -1.76
ISM1	YPL040C	IDI1	P15496	288 aa		4.05	□□□□□ -1.76
ISM1	YPL040C	RGP1	P16664	663 aa		4.05	□□□□□ -1.76
ISM1	YPL040C	ATP12	P22135	325 aa		4.05	□□□□□ -1.76
ISM1	YPL040C	RET1	P22276	1149 aa	Known RBP	4.05	□□□□□ -1.76
ISM1	YPL040C	DAL1	P32375	460 aa		4.05	□□□□□ -1.76
ISM1	YPL040C	CDC12	P32468	407 aa	Known RBP	4.05	□□□□□ -1.76
ISM1	YPL040C	NOP16	P40007	231 aa	Known RBP	4.05	□□□□□ -1.76
ISM1	YPL040C	TPA1	P40032	644 aa	Known RBP	4.05	□□□□□ -1.76
ISM1	YPL040C	IRC6	P43615	237 aa		4.05	□□□□□ -1.76
ISM1	YPL040C	YDR306C	Q06640	478 aa		4.05	□□□□□ -1.76
ISM1	YPL040C	DED1	P06634	604 aa	Known RBP	4.05	□□□□□ -1.76
ISM1	YPL040C	SCT1	P32784	759 aa		4.05	□□□□□ -1.76
ISM1	YPL040C	RGD1	P38339	666 aa		4.05	□□□□□ -1.76
ISM1	YPL040C	SHU2	P38957	223 aa		4.05	□□□□□ -1.76
ISM1	YPL040C	INP51	P40559	946 aa	Known RBP	4.05	□□□□□ -1.76
ISM1	YPL040C	RET2	P43621	546 aa		4.05	□□□□□ -1.76
ISM1	YPL040C	YJR124C	P47159	448 aa		4.05	□□□□□ -1.76
ISM1	YPL040C	HNT2	P49775	206 aa		4.05	□□□□□ -1.76
ISM1	YPL040C	TAD1	P53065	400 aa		4.05	□□□□□ -1.76
ISM1	YPL040C	YKU80	Q04437	629 aa		4.05	□□□□□ -1.76
ISM1	YPL040C	RGA2	Q06407	1009 aa		4.05	□□□□□ -1.76
ISM1	YPL040C	VHS3	Q08438	674 aa		4.05	□□□□□ -1.76
ISM1	YPL040C	ENV7	Q12003	364 aa		4.05	□□□□□ -1.76
ISM1	YPL040C	NHA1	Q99271	985 aa		4.05	□□□□□ -1.76
ISM1	YPL040C	NAT1	P12945	854 aa	Known RBP	4.04	□□□□□ -1.76
ISM1	YPL040C	MLS1	P30952	554 aa		4.04	□□□□□ -1.76
ISM1	YPL040C	ANP1	P32629	500 aa		4.04	□□□□□ -1.76
ISM1	YPL040C	YKL050C	P35736	922 aa		4.04	□□□□□ -1.76
ISM1	YPL040C	MUD2	P36084	527 aa	Known RBP	4.04	□□□□□ -1.76
ISM1	YPL040C	EMP65	P40085	556 aa		4.04	□□□□□ -1.76
ISM1	YPL040C	YLR352W	Q06479	807 aa		4.04	□□□□□ -1.76
ISM1	YPL040C	GUP2	Q08929	609 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 56.5 ms