RNA–Protein interactions for RNA: YOR055W

YOR055W, Transcript of Dubious open reading frame, yeast

Gene YOR055W, Length 435 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YOR055W	YOR055W	SOL4	P53315	255 aa		2.71	□□□□□ -1.98
YOR055W	YOR055W	MFM1	Q02783	413 aa		2.71	□□□□□ -1.98
YOR055W	YOR055W	SEN54	Q02825	467 aa	Predicted RBP	2.71	□□□□□ -1.98
YOR055W	YOR055W	UTP5	Q04177	643 aa	Known RBP	2.71	□□□□□ -1.98
YOR055W	YOR055W	TMA64	Q04600	565 aa	Known RBP	2.71	□□□□□ -1.98
YOR055W	YOR055W	SFH1	Q06168	426 aa		2.71	□□□□□ -1.98
YOR055W	YOR055W	WHI4	Q07655	649 aa	Known RBP	2.71	□□□□□ -1.98
YOR055W	YOR055W	MLH2	Q07980	695 aa		2.71	□□□□□ -1.98
YOR055W	YOR055W	YPL277C	Q08989	487 aa		2.71	□□□□□ -1.98
YOR055W	YOR055W	RMP1	Q12530	201 aa		2.71	□□□□□ -1.98
YOR055W	YOR055W	ERG12	P07277	443 aa		2.7	□□□□□ -1.98
YOR055W	YOR055W	CLN3	P13365	580 aa		2.7	□□□□□ -1.98
YOR055W	YOR055W	HPR1	P17629	752 aa	Known RBP	2.7	□□□□□ -1.98
YOR055W	YOR055W	CKI1	P20485	582 aa		2.7	□□□□□ -1.98
YOR055W	YOR055W	APL1	P27351	700 aa		2.7	□□□□□ -1.98
YOR055W	YOR055W	SRB4	P32569	687 aa		2.7	□□□□□ -1.98
YOR055W	YOR055W	YEL043W	P32618	956 aa		2.7	□□□□□ -1.98
YOR055W	YOR055W	TGL1	P34163	548 aa		2.7	□□□□□ -1.98
YOR055W	YOR055W	YKL023W	P36103	277 aa	Known RBP	2.7	□□□□□ -1.98
YOR055W	YOR055W	BYE1	P36106	594 aa		2.7	□□□□□ -1.98
YOR055W	YOR055W	JNM1	P36224	373 aa		2.7	□□□□□ -1.98
YOR055W	YOR055W	PHO88	P38264	188 aa	Predicted RBP	2.7	□□□□□ -1.98
YOR055W	YOR055W	SMC2	P38989	1170 aa	Known RBP	2.7	□□□□□ -1.98
YOR055W	YOR055W	SAP1	P39955	897 aa	Known RBP	2.7	□□□□□ -1.98
YOR055W	YOR055W	NIT1	P40447	199 aa		2.7	□□□□□ -1.98
YOR055W	YOR055W	MVP1	P40959	511 aa	Known RBP	2.7	□□□□□ -1.98
YOR055W	YOR055W	LCB2	P40970	561 aa		2.7	□□□□□ -1.98
YOR055W	YOR055W	FET4	P40988	552 aa		2.7	□□□□□ -1.98
YOR055W	YOR055W	MIC19	P43594	170 aa		2.7	□□□□□ -1.98
YOR055W	YOR055W	YJL007C	P47080	104 aa		2.7	□□□□□ -1.98
YOR055W	YOR055W	LIF1	P53150	421 aa		2.7	□□□□□ -1.98
YOR055W	YOR055W	SNU71	P53207	620 aa	Known RBP	2.7	□□□□□ -1.98
YOR055W	YOR055W	TOF1	P53840	1238 aa		2.7	□□□□□ -1.98
YOR055W	YOR055W	ALD6	P54115	500 aa	Known RBP	2.7	□□□□□ -1.98
YOR055W	YOR055W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	2.7	□□□□□ -1.98	not detected
YOR055W	YOR055W	DIG1	Q03063	452 aa	Known RBP	2.7	□□□□□ -1.98
YOR055W	YOR055W	OYE2	Q03558	400 aa	Known RBP	2.7	□□□□□ -1.98
YOR055W	YOR055W	YMR114C	Q04471	368 aa	Known RBP	2.7	□□□□□ -1.98
YOR055W	YOR055W	UTP14	Q04500	899 aa	Known RBP	2.7	□□□□□ -1.98
YOR055W	YOR055W	POB3	Q04636	552 aa	Known RBP	2.7	□□□□□ -1.98
YOR055W	YOR055W	ATG23	Q06671	453 aa		2.7	□□□□□ -1.98
YOR055W	YOR055W	OPY2	Q06810	360 aa		2.7	□□□□□ -1.98
YOR055W	YOR055W	NOP6	Q07623	225 aa	Known RBP	2.7	□□□□□ -1.98
YOR055W	YOR055W	DAS2	Q12084	232 aa		2.7	□□□□□ -1.98
YOR055W	YOR055W	NCR1	Q12200	1170 aa		2.7	□□□□□ -1.98
YOR055W	YOR055W	OSH2	Q12451	1283 aa		2.7	□□□□□ -1.98
YOR055W	YOR055W	LAA1	P39526	2014 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	TRP2	P00899	507 aa	Known RBP	2.69	□□□□□ -1.98
YOR055W	YOR055W	RPS9B	P05755	195 aa	Known RBP	2.69	□□□□□ -1.98
YOR055W	YOR055W	SPT2	P06843	333 aa	Predicted RBP	2.69	□□□□□ -1.98
YOR055W	YOR055W	SRD1	P09007	221 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	FBP1	P09201	348 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	SAM1	P10659	382 aa	Known RBP	2.69	□□□□□ -1.98
YOR055W	YOR055W	PCK1	P10963	549 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	GFA1	P14742	717 aa	Known RBP	2.69	□□□□□ -1.98
YOR055W	YOR055W	PRP22	P24384	1145 aa	Known RBP	2.69	□□□□□ -1.98
YOR055W	YOR055W	NAM7	P30771	971 aa	Known RBP	2.69	□□□□□ -1.98
YOR055W	YOR055W	MRF1	P30775	413 aa	Predicted RBP	2.69	□□□□□ -1.98
YOR055W	YOR055W	SUV3	P32580	737 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	ECM32	P32644	1121 aa	Known RBP	2.69	□□□□□ -1.98
YOR055W	YOR055W	GCG1	P32656	232 aa	Known RBP	2.69	□□□□□ -1.98
YOR055W	YOR055W	NIP100	P33420	868 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	KTR2	P33550	425 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	MCD4	P36051	919 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	RGD1	P38339	666 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	TPS3	P38426	1054 aa	Known RBP	2.69	□□□□□ -1.98
YOR055W	YOR055W	ERC1	P38767	581 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	VPS41	P38959	992 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	FIS1	P40515	155 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	VID30	P53076	958 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	BTN2	P53286	410 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	SQS1	P53866	767 aa	Known RBP	2.69	□□□□□ -1.98
YOR055W	YOR055W	SEC5	P89102	971 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	VTC3	Q02725	835 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	YML037C	Q03703	340 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	URH1	Q04179	340 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	VTI1	Q04338	217 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	YDR278C	Q05612	105 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	YLR297W	Q05899	129 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	YPR078C	Q06813	372 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	NUR1	Q12066	484 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	GIN4	Q12263	1142 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	MED1	Q12321	566 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	CSR2	Q12734	1121 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	ECM29	P38737	1868 aa		2.69	□□□□□ -1.98
YOR055W	YOR055W	RIF1	P29539	1916 aa		2.68	□□□□□ -1.98
YOR055W	YOR055W	PHO8	P11491	566 aa		2.68	□□□□□ -1.98
YOR055W	YOR055W	GAL2	P13181	574 aa		2.68	□□□□□ -1.98
YOR055W	YOR055W	YDJ1	P25491	409 aa	Known RBP	2.68	□□□□□ -1.98
YOR055W	YOR055W	CLB5	P30283	435 aa		2.68	□□□□□ -1.98
YOR055W	YOR055W	DEP1	P31385	405 aa		2.68	□□□□□ -1.98
YOR055W	YOR055W	CDC11	P32458	415 aa		2.68	□□□□□ -1.98
YOR055W	YOR055W	CNS1	P33313	385 aa		2.68	□□□□□ -1.98
YOR055W	YOR055W	PGM1	P33401	570 aa	Known RBP	2.68	□□□□□ -1.98
YOR055W	YOR055W	SHP1	P34223	423 aa		2.68	□□□□□ -1.98
YOR055W	YOR055W	LAS1	P36146	502 aa	Predicted RBP	2.68	□□□□□ -1.98
YOR055W	YOR055W	SLI15	P38283	698 aa		2.68	□□□□□ -1.98
YOR055W	YOR055W	GDT1	P38301	280 aa	Predicted RBP	2.68	□□□□□ -1.98
YOR055W	YOR055W	PNT1	P38969	423 aa		2.68	□□□□□ -1.98
YOR055W	YOR055W	RPN3	P40016	523 aa	Known RBP	2.68	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms