RNA–Protein interactions for RNA: YOL022C

TSR4, Cytoplasmic protein required for correct processing of 20S pre-rRNA, yeast

Gene TSR4, Length 1,227 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR4	YOL022C	SRP1	Q02821	542 aa	Known RBP	4.69	□□□□□ -1.66
TSR4	YOL022C	TDA5	Q06417	326 aa	Known RBP	4.69	□□□□□ -1.66
TSR4	YOL022C	NOP12	Q08208	459 aa	Known RBP	4.69	□□□□□ -1.66
TSR4	YOL022C	HBS1	P32769	611 aa	Known RBP	4.68	□□□□□ -1.66
TSR4	YOL022C	POA1	P38218	177 aa		4.68	□□□□□ -1.66
TSR4	YOL022C	IRR1	P40541	1150 aa		4.68	□□□□□ -1.66
TSR4	YOL022C	CHA4	P43634	648 aa		4.68	□□□□□ -1.66
TSR4	YOL022C	YKE2	P52553	114 aa		4.68	□□□□□ -1.66
TSR4	YOL022C	YGR012W	P53206	393 aa		4.68	□□□□□ -1.66
TSR4	YOL022C	YTA7	P40340	1379 aa		4.67	□□□□□ -1.66
TSR4	YOL022C	HIS5	P07172	385 aa		4.67	□□□□□ -1.66
TSR4	YOL022C	SPE1	P08432	466 aa		4.67	□□□□□ -1.66
TSR4	YOL022C	ENA1	P13587	1091 aa		4.67	□□□□□ -1.66
TSR4	YOL022C	RPC82	P32349	654 aa		4.67	□□□□□ -1.66
TSR4	YOL022C	YKR078W	P36158	585 aa	Known RBP	4.67	□□□□□ -1.66
TSR4	YOL022C	YBR184W	P38299	523 aa		4.67	□□□□□ -1.66
TSR4	YOL022C	NNF1	P47149	201 aa		4.67	□□□□□ -1.66
TSR4	YOL022C	MNN10	P50108	393 aa	Known RBP	4.67	□□□□□ -1.66
TSR4	YOL022C	ENA2	Q01896	1091 aa		4.67	□□□□□ -1.66
TSR4	YOL022C	BUL2	Q03758	920 aa	Known RBP	4.67	□□□□□ -1.66
TSR4	YOL022C	YDR306C	Q06640	478 aa		4.67	□□□□□ -1.66
TSR4	YOL022C	ENA5	Q12691	1091 aa		4.67	□□□□□ -1.66
TSR4	YOL022C	HSF1	P10961	833 aa		4.66	□□□□□ -1.66
TSR4	YOL022C	PLB1	P39105	664 aa		4.66	□□□□□ -1.66
TSR4	YOL022C	SIT1	P39980	628 aa		4.66	□□□□□ -1.66
TSR4	YOL022C	YER158C	P40095	573 aa		4.66	□□□□□ -1.66
TSR4	YOL022C	FMP25	Q08023	583 aa		4.66	□□□□□ -1.66
TSR4	YOL022C	ERT1	P38140	529 aa		4.65	□□□□□ -1.67
TSR4	YOL022C	URM1	P40554	99 aa	Predicted RBP	4.65	□□□□□ -1.67
TSR4	YOL022C	MCM6	P53091	1017 aa	Known RBP	4.65	□□□□□ -1.67
TSR4	YOL022C	KCS1	Q12494	1050 aa		4.65	□□□□□ -1.67
TSR4	YOL022C	PMA1	P05030	918 aa	Known RBP	4.64	□□□□□ -1.67
TSR4	YOL022C	GRX1	P25373	110 aa	Known RBP	4.64	□□□□□ -1.67
TSR4	YOL022C	DCG1	P32460	244 aa		4.64	□□□□□ -1.67
TSR4	YOL022C	EXG2	P52911	562 aa		4.64	□□□□□ -1.67
TSR4	YOL022C	WRS1	Q12109	432 aa	Known RBP	4.64	□□□□□ -1.67
TSR4	YOL022C	AAR2	P32357	355 aa	Predicted RBP	4.63	□□□□□ -1.67
TSR4	YOL022C	WHI4	Q07655	649 aa	Known RBP	4.63	□□□□□ -1.67
TSR4	YOL022C	PRP9	P19736	530 aa	Known RBP	4.62	□□□□□ -1.67
TSR4	YOL022C	HCM1	P25364	564 aa		4.62	□□□□□ -1.67
TSR4	YOL022C	CDC48	P25694	835 aa	Known RBP	4.62	□□□□□ -1.67
TSR4	YOL022C	PPH3	P32345	308 aa		4.62	□□□□□ -1.67
TSR4	YOL022C	CCC2	P38995	1004 aa		4.62	□□□□□ -1.67
TSR4	YOL022C	NCS6	P53088	359 aa		4.62	□□□□□ -1.67
TSR4	YOL022C	UTP8	P53276	713 aa	Known RBP	4.62	□□□□□ -1.67
TSR4	YOL022C	NAN1	Q02931	896 aa	Known RBP	4.62	□□□□□ -1.67
TSR4	YOL022C	GSF2	Q04697	403 aa	Known RBP	4.62	□□□□□ -1.67
TSR4	YOL022C	NTO1	Q12311	748 aa		4.62	□□□□□ -1.67
TSR4	YOL022C	RPP2A	P05319	106 aa	Known RBP	4.61	□□□□□ -1.67
TSR4	YOL022C	RPL8B	P29453	256 aa	Known RBP	4.61	□□□□□ -1.67
TSR4	YOL022C	STE14	P32584	239 aa		4.61	□□□□□ -1.67
TSR4	YOL022C	YRO2	P38079	344 aa		4.61	□□□□□ -1.67
TSR4	YOL022C	TOK1	P40310	691 aa		4.61	□□□□□ -1.67
TSR4	YOL022C	PSP2	P50109	593 aa	Known RBP	4.61	□□□□□ -1.67
TSR4	YOL022C	PHO23	P50947	330 aa		4.61	□□□□□ -1.67
TSR4	YOL022C	RAI1	P53063	387 aa	Known RBP	4.61	□□□□□ -1.67
TSR4	YOL022C	UPC2	Q12151	913 aa		4.61	□□□□□ -1.67
TSR4	YOL022C	LAS17	Q12446	633 aa		4.61	□□□□□ -1.67
TSR4	YOL022C	TUB2	P02557	457 aa	Known RBP	4.6	□□□□□ -1.67
TSR4	YOL022C	ADE8	P04161	214 aa		4.6	□□□□□ -1.67
TSR4	YOL022C	TRM2	P33753	639 aa		4.6	□□□□□ -1.67
TSR4	YOL022C	ATG19	P35193	415 aa		4.6	□□□□□ -1.67
TSR4	YOL022C	ALR2	P43553	858 aa		4.6	□□□□□ -1.67
TSR4	YOL022C	TPO2	P53283	614 aa		4.6	□□□□□ -1.67
TSR4	YOL022C	NPC2	Q12408	173 aa		4.6	□□□□□ -1.67
TSR4	YOL022C	YOL098C	Q12496	1037 aa		4.6	□□□□□ -1.67
TSR4	YOL022C	NOT3	P06102	836 aa	Known RBP	4.59	□□□□□ -1.67
TSR4	YOL022C	FBP1	P09201	348 aa		4.59	□□□□□ -1.67
TSR4	YOL022C	RAD4	P14736	754 aa		4.59	□□□□□ -1.67
TSR4	YOL022C	LCD1	Q04377	747 aa		4.59	□□□□□ -1.67
TSR4	YOL022C	YPR196W	Q06595	470 aa		4.59	□□□□□ -1.67
TSR4	YOL022C	UBX5	Q06682	500 aa		4.59	□□□□□ -1.67
TSR4	YOL022C	PUS9	Q12069	462 aa		4.59	□□□□□ -1.67
TSR4	YOL022C	HBN1	Q96VH4	193 aa		4.59	□□□□□ -1.67
TSR4	YOL022C	PMI40	P29952	429 aa	Known RBP	4.58	□□□□□ -1.68
TSR4	YOL022C	STE13	P33894	931 aa		4.58	□□□□□ -1.68
TSR4	YOL022C	DEF1	P35732	738 aa	Known RBP	4.58	□□□□□ -1.68
TSR4	YOL022C	ERP6	P53198	216 aa		4.58	□□□□□ -1.68
TSR4	YOL022C	SLU7	Q02775	382 aa	Known RBP	4.58	□□□□□ -1.68
TSR4	YOL022C	FPR4	Q06205	392 aa	Predicted RBP	4.58	□□□□□ -1.68
TSR4	YOL022C	SPO75	Q07798	868 aa		4.58	□□□□□ -1.68
TSR4	YOL022C	MSD1	P15179	658 aa	Known RBP	4.57	□□□□□ -1.68
TSR4	YOL022C	PET10	P36139	283 aa		4.57	□□□□□ -1.68
TSR4	YOL022C	YHR020W	P38708	688 aa	Known RBP	4.57	□□□□□ -1.68
TSR4	YOL022C	IOC3	P43596	787 aa		4.57	□□□□□ -1.68
TSR4	YOL022C	YJL049W	P47048	450 aa		4.57	□□□□□ -1.68
TSR4	YOL022C	CCM1	P48237	864 aa	Predicted RBP	4.57	□□□□□ -1.68
TSR4	YOL022C	BUL1	P48524	976 aa		4.57	□□□□□ -1.68
TSR4	YOL022C	SLI1	P53304	468 aa		4.57	□□□□□ -1.68
TSR4	YOL022C	SUN4	P53616	420 aa		4.57	□□□□□ -1.68
TSR4	YOL022C	ENB1	Q08299	606 aa		4.57	□□□□□ -1.68
TSR4	YOL022C	YPR071W	Q12346	211 aa		4.57	□□□□□ -1.68
TSR4	YOL022C	KAR4	P25583	335 aa		4.56	□□□□□ -1.68
TSR4	YOL022C	YBR284W	P38150	797 aa		4.56	□□□□□ -1.68
TSR4	YOL022C	CHS7	P38843	316 aa		4.56	□□□□□ -1.68
TSR4	YOL022C	MSS4	P38994	779 aa		4.56	□□□□□ -1.68
TSR4	YOL022C	MSE1	P48525	536 aa		4.56	□□□□□ -1.68
TSR4	YOL022C	HDA1	P53973	706 aa		4.56	□□□□□ -1.68
TSR4	YOL022C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
TSR4	YOL022C	SSL1	Q04673	461 aa	Predicted RBP	4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms