RNA–Protein interactions for RNA: YMR075W

RCO1, Transcript of Essential component of the Rpd3S histone deacetylase complex, yeastyeast

Gene RCO1, Length 2,055 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCO1YMR075W CAF20P12962 161 aaKnown RBP1.52□□□□□ -2.17
RCO1YMR075W MLS1P30952 554 aa1.52□□□□□ -2.17
RCO1YMR075W CNN1P43618 361 aa1.52□□□□□ -2.17
RCO1YMR075W SLK19Q08581 821 aaKnown RBP1.52□□□□□ -2.17
RCO1YMR075W VPS34P22543 875 aa1.52□□□□□ -2.17
RCO1YMR075W SYP1P25623 870 aaKnown RBP1.52□□□□□ -2.17
RCO1YMR075W CCT4P39078 528 aaKnown RBP1.52□□□□□ -2.17
RCO1YMR075W XYL2Q07993 356 aa1.52□□□□□ -2.17
RCO1YMR075W NEW1Q08972 1196 aaKnown RBP1.52□□□□□ -2.17
RCO1YMR075W RQC2Q12532 1038 aaKnown RBP1.52□□□□□ -2.17
RCO1YMR075W RPC82P32349 654 aa1.51□□□□□ -2.17
RCO1YMR075W RAT1Q02792 1006 aaKnown RBP1.51□□□□□ -2.17
RCO1YMR075W GNT1Q12096 491 aa1.51□□□□□ -2.17
RCO1YMR075W DBP5P20449 482 aaKnown RBP1.5□□□□□ -2.17
RCO1YMR075W PRE9P23638 258 aaKnown RBP1.5□□□□□ -2.17
RCO1YMR075W SIW14P53965 281 aa1.5□□□□□ -2.17
RCO1YMR075W YPL109CQ02981 657 aa1.5□□□□□ -2.17
RCO1YMR075W PEX19Q07418 342 aa1.5□□□□□ -2.17
RCO1YMR075W UPC2Q12151 913 aa1.5□□□□□ -2.17
RCO1YMR075W YLL058WQ12198 575 aa1.5□□□□□ -2.17
RCO1YMR075W MKK2P32491 506 aa1.49□□□□□ -2.17
RCO1YMR075W CBR1P38626 284 aaKnown RBP1.49□□□□□ -2.17
RCO1YMR075W SSL2Q00578 843 aa1.49□□□□□ -2.17
RCO1YMR075W SPP382Q06411 708 aaPredicted RBP1.49□□□□□ -2.17
RCO1YMR075W FUN30P31380 1131 aa1.49□□□□□ -2.17
RCO1YMR075W SLA2P33338 968 aa1.49□□□□□ -2.17
RCO1YMR075W ECM21P38167 1117 aaKnown RBP1.49□□□□□ -2.17
RCO1YMR075W YEL020CP39994 560 aa1.49□□□□□ -2.17
RCO1YMR075W XBP1P40489 647 aa1.49□□□□□ -2.17
RCO1YMR075W ROD1Q02805 837 aa1.49□□□□□ -2.17
RCO1YMR075W TRM11Q12463 433 aa1.49□□□□□ -2.17
RCO1YMR075W RPL11AP0C0W9 174 aaKnown RBP1.48□□□□□ -2.17
RCO1YMR075W UGA4P32837 571 aa1.48□□□□□ -2.17
RCO1YMR075W TRM13Q12383 476 aa1.48□□□□□ -2.17
RCO1YMR075W RPL11BQ3E757 174 aaPredicted RBP1.48□□□□□ -2.17
RCO1YMR075W HEM13P11353 328 aaKnown RBP1.47□□□□□ -2.17
RCO1YMR075W YJL206CP39529 758 aa1.47□□□□□ -2.17
RCO1YMR075W MXR1P40029 184 aa1.47□□□□□ -2.17
RCO1YMR075W NAB6Q03735 1134 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
RCO1YMR075W PGK1P00560 416 aaKnown RBP1.47□□□□□ -2.17
RCO1YMR075W AMA1P50082 593 aa1.47□□□□□ -2.17
RCO1YMR075W RPL34AP87262 121 aaPredicted RBP1.47□□□□□ -2.17
RCO1YMR075W WHI4Q07655 649 aaKnown RBP1.47□□□□□ -2.17
RCO1YMR075W MCM7P38132 845 aa1.46□□□□□ -2.18
RCO1YMR075W DED81P38707 554 aaKnown RBP1.46□□□□□ -2.18
RCO1YMR075W VPS30Q02948 557 aa1.46□□□□□ -2.18
RCO1YMR075W CIR2Q08822 631 aa1.46□□□□□ -2.18
RCO1YMR075W SWM1Q12379 170 aa1.46□□□□□ -2.18
RCO1YMR075W CTF13P35203 478 aa1.46□□□□□ -2.18
RCO1YMR075W GRS1P38088 690 aaKnown RBP1.46□□□□□ -2.18
RCO1YMR075W ERG5P54781 538 aa1.46□□□□□ -2.18
RCO1YMR075W YPL068CQ02749 293 aa1.46□□□□□ -2.18
RCO1YMR075W SGO1Q08490 590 aa1.46□□□□□ -2.18
RCO1YMR075W YOR111WQ99210 232 aa1.46□□□□□ -2.18
RCO1YMR075W SEC8P32855 1065 aa1.45□□□□□ -2.18
RCO1YMR075W MPH1P40562 993 aa1.45□□□□□ -2.18
RCO1YMR075W MCD1Q12158 566 aa1.45□□□□□ -2.18
RCO1YMR075W RAD27P26793 382 aa1.44□□□□□ -2.18
RCO1YMR075W SNF7P39929 240 aaKnown RBP1.44□□□□□ -2.18
RCO1YMR075W YAP1802P53309 568 aa1.44□□□□□ -2.18
RCO1YMR075W ERG11P10614 530 aa1.44□□□□□ -2.18
RCO1YMR075W PAC2P39937 518 aa1.44□□□□□ -2.18
RCO1YMR075W YJL163CP46996 555 aa1.44□□□□□ -2.18
RCO1YMR075W MUP1P50276 574 aa1.44□□□□□ -2.18
RCO1YMR075W MRK1P50873 501 aa1.44□□□□□ -2.18
RCO1YMR075W GPI13Q07830 1017 aa1.44□□□□□ -2.18
RCO1YMR075W MDM38Q08179 573 aa1.44□□□□□ -2.18
RCO1YMR075W NGG1P32494 702 aa1.43□□□□□ -2.18
RCO1YMR075W STE14P32584 239 aa1.43□□□□□ -2.18
RCO1YMR075W SPC29P33419 253 aa1.43□□□□□ -2.18
RCO1YMR075W PNT1P38969 423 aa1.43□□□□□ -2.18
RCO1YMR075W MRPS18P42847 217 aa1.43□□□□□ -2.18
RCO1YMR075W ENP2P48234 707 aaKnown RBP1.43□□□□□ -2.18
RCO1YMR075W HSV2P50079 448 aaPredicted RBP1.43□□□□□ -2.18
RCO1YMR075W STP1Q00947 519 aa1.43□□□□□ -2.18
RCO1YMR075W SRT1Q03175 343 aa1.43□□□□□ -2.18
RCO1YMR075W NUT2Q06213 157 aa1.43□□□□□ -2.18
RCO1YMR075W HRB1P38922 454 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
RCO1YMR075W RAI1P53063 387 aaKnown RBP1.43□□□□□ -2.18
RCO1YMR075W MTC3P53077 123 aa1.43□□□□□ -2.18
RCO1YMR075W OSW1Q08692 278 aa1.43□□□□□ -2.18
RCO1YMR075W TAF3Q12297 353 aa1.43□□□□□ -2.18
RCO1YMR075W FKH2P41813 862 aa1.42□□□□□ -2.18
RCO1YMR075W IRC8P47046 822 aa1.42□□□□□ -2.18
RCO1YMR075W NUP1P20676 1076 aa1.41□□□□□ -2.18
RCO1YMR075W YGR053CP53234 283 aa1.41□□□□□ -2.18
RCO1YMR075W YPR196WQ06595 470 aa1.41□□□□□ -2.18
RCO1YMR075W SEC21P32074 935 aaKnown RBP1.41□□□□□ -2.18
RCO1YMR075W HIS7P33734 552 aaKnown RBP1.41□□□□□ -2.18
RCO1YMR075W GLG1P36143 616 aa1.41□□□□□ -2.18
RCO1YMR075W PIC2P40035 300 aa1.41□□□□□ -2.18
RCO1YMR075W ARG2P40360 574 aa1.41□□□□□ -2.18
RCO1YMR075W YIR042CP40586 236 aa1.41□□□□□ -2.18
RCO1YMR075W TEL2P53038 688 aa1.41□□□□□ -2.18
RCO1YMR075W SMX3P54999 86 aaPredicted RBP1.41□□□□□ -2.18
RCO1YMR075W MRL1Q06815 381 aa1.41□□□□□ -2.18
RCO1YMR075W MET30P39014 640 aa1.4□□□□□ -2.19
RCO1YMR075W BDH2P39713 417 aa1.4□□□□□ -2.19
RCO1YMR075W FMP52P40008 231 aa1.4□□□□□ -2.19
RCO1YMR075W PSA1P41940 361 aaKnown RBP1.4□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 75.3 ms