RNA–Protein interactions for RNA: YML118W

NGL3, Transcript of 3'-5' exonuclease specific for poly-A RNAs, yeast

Gene NGL3, Length 1,518 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NGL3	YML118W	YPL260W	Q08977	551 aa		5.22	□□□□□ -1.57
NGL3	YML118W	YKL133C	P36066	463 aa		5.21	□□□□□ -1.58
NGL3	YML118W	YBR238C	P38330	731 aa	Known RBP	5.21	□□□□□ -1.58
NGL3	YML118W	GPP2	P40106	250 aa	Known RBP	5.21	□□□□□ -1.58
NGL3	YML118W	RSC8	P43609	557 aa	Known RBP	5.21	□□□□□ -1.58
NGL3	YML118W	DAM1	P53267	343 aa		5.21	□□□□□ -1.58
NGL3	YML118W	ATP25	Q03153	612 aa		5.21	□□□□□ -1.58
NGL3	YML118W	GIR2	Q03768	265 aa	Predicted RBP	5.21	□□□□□ -1.58
NGL3	YML118W	MLC2	Q06580	163 aa		5.21	□□□□□ -1.58
NGL3	YML118W	NPP1	P25353	742 aa		5.2	□□□□□ -1.58
NGL3	YML118W	KCC4	P25389	1037 aa		5.2	□□□□□ -1.58
NGL3	YML118W	EMC3	P36039	253 aa		5.2	□□□□□ -1.58
NGL3	YML118W	MCD4	P36051	919 aa		5.2	□□□□□ -1.58
NGL3	YML118W	HSE1	P38753	452 aa		5.2	□□□□□ -1.58
NGL3	YML118W	RRP8	P38961	392 aa	Known RBP	5.2	□□□□□ -1.58
NGL3	YML118W	POL5	P39985	1022 aa	Known RBP	5.2	□□□□□ -1.58
NGL3	YML118W	MXR1	P40029	184 aa		5.2	□□□□□ -1.58
NGL3	YML118W	MNN11	P46985	422 aa	Known RBP	5.2	□□□□□ -1.58
NGL3	YML118W	AIM14	P53109	570 aa		5.2	□□□□□ -1.58
NGL3	YML118W	SNP1	Q00916	300 aa	Predicted RBP	5.2	□□□□□ -1.58
NGL3	YML118W	ATG33	Q06485	197 aa		5.2	□□□□□ -1.58
NGL3	YML118W	AVO1	Q08236	1176 aa		5.2	□□□□□ -1.58
NGL3	YML118W	SPO21	Q12411	609 aa		5.2	□□□□□ -1.58
NGL3	YML118W	RMP1	Q12530	201 aa		5.2	□□□□□ -1.58
NGL3	YML118W	SSH4	P32343	579 aa		5.19	□□□□□ -1.58
NGL3	YML118W	HOG1	P32485	435 aa		5.19	□□□□□ -1.58
NGL3	YML118W	EXO84	P38261	753 aa		5.19	□□□□□ -1.58
NGL3	YML118W	QNS1	P38795	714 aa	Known RBP	5.19	□□□□□ -1.58
NGL3	YML118W	CCM1	P48237	864 aa	Predicted RBP	5.19	□□□□□ -1.58
NGL3	YML118W	SOK2	P53438	785 aa	Predicted RBP	5.19	□□□□□ -1.58
NGL3	YML118W	PAP2	P53632	584 aa	Known RBP	5.19	□□□□□ -1.58
NGL3	YML118W	PHM6	Q05637	104 aa		5.19	□□□□□ -1.58
NGL3	YML118W	PSR2	Q07949	397 aa		5.19	□□□□□ -1.58
NGL3	YML118W	MET7	Q08645	548 aa		5.19	□□□□□ -1.58
NGL3	YML118W	ALG6	Q12001	544 aa	Known RBP	5.19	□□□□□ -1.58
NGL3	YML118W	HMG1	P12683	1054 aa		5.18	□□□□□ -1.58
NGL3	YML118W	FPS1	P23900	669 aa		5.18	□□□□□ -1.58
NGL3	YML118W	KIP1	P28742	1111 aa		5.18	□□□□□ -1.58
NGL3	YML118W	DAL3	P32459	195 aa		5.18	□□□□□ -1.58
NGL3	YML118W	OSH7	P38755	437 aa		5.18	□□□□□ -1.58
NGL3	YML118W	TAN1	P53072	289 aa	Predicted RBP	5.18	□□□□□ -1.58
NGL3	YML118W	ESF2	P53743	316 aa	Known RBP	5.18	□□□□□ -1.58
NGL3	YML118W	NAM8	Q00539	523 aa	Known RBP	5.18	□□□□□ -1.58
NGL3	YML118W	GUP2	Q08929	609 aa		5.18	□□□□□ -1.58
NGL3	YML118W	ENV7	Q12003	364 aa		5.18	□□□□□ -1.58
NGL3	YML118W	MPH2	P0CD99	609 aa		5.18	□□□□□ -1.58
NGL3	YML118W	DIT1	P21623	536 aa		5.18	□□□□□ -1.58
NGL3	YML118W	PER1	P25625	357 aa		5.18	□□□□□ -1.58
NGL3	YML118W	BIT2	P38346	545 aa		5.18	□□□□□ -1.58
NGL3	YML118W	YHL041W	P38730	149 aa		5.18	□□□□□ -1.58
NGL3	YML118W	HIS6	P40545	261 aa		5.18	□□□□□ -1.58
NGL3	YML118W	NIT3	P49954	291 aa		5.18	□□□□□ -1.58
NGL3	YML118W	YGR045C	P53229	120 aa		5.18	□□□□□ -1.58
NGL3	YML118W	TY1A-DR2	Q03964	440 aa	Known RBP	5.18	□□□□□ -1.58
NGL3	YML118W	YDR514C	Q04408	483 aa		5.18	□□□□□ -1.58
NGL3	YML118W	HRQ1	Q05549	1077 aa		5.18	□□□□□ -1.58
NGL3	YML118W	YLL054C	Q12244	843 aa		5.18	□□□□□ -1.58
NGL3	YML118W	APA1	P16550	321 aa	Known RBP	5.17	□□□□□ -1.58
NGL3	YML118W	PRO1	P32264	428 aa		5.17	□□□□□ -1.58
NGL3	YML118W	HEM12	P32347	362 aa	Predicted RBP	5.17	□□□□□ -1.58
NGL3	YML118W	DID4	P36108	232 aa		5.17	□□□□□ -1.58
NGL3	YML118W	KTR4	P38131	464 aa		5.17	□□□□□ -1.58
NGL3	YML118W	YGR153W	P48238	217 aa		5.17	□□□□□ -1.58
NGL3	YML118W	YMR265C	Q03508	461 aa	Known RBP	5.17	□□□□□ -1.58
NGL3	YML118W	RSA3	Q05942	220 aa	Known RBP	5.17	□□□□□ -1.58
NGL3	YML118W	ACM1	Q08981	209 aa		5.17	□□□□□ -1.58
NGL3	YML118W	DBF20	P32328	564 aa		5.16	□□□□□ -1.58
NGL3	YML118W	SLA2	P33338	968 aa		5.16	□□□□□ -1.58
NGL3	YML118W	YKL151C	P36059	337 aa		5.16	□□□□□ -1.58
NGL3	YML118W	GPB2	P39717	880 aa		5.16	□□□□□ -1.58
NGL3	YML118W	GIP2	P40036	548 aa		5.16	□□□□□ -1.58
NGL3	YML118W	CCT5	P40413	562 aa	Known RBP	5.16	□□□□□ -1.58
NGL3	YML118W	ECM9	Q02202	377 aa		5.16	□□□□□ -1.58
NGL3	YML118W	YML131W	Q03102	365 aa		5.16	□□□□□ -1.58
NGL3	YML118W	NHX1	Q04121	633 aa		5.16	□□□□□ -1.58
NGL3	YML118W	YMR074C	Q04773	145 aa		5.16	□□□□□ -1.58
NGL3	YML118W	YDR338C	Q05497	695 aa		5.16	□□□□□ -1.58
NGL3	YML118W	RRI2	Q12348	645 aa		5.16	□□□□□ -1.58
NGL3	YML118W	ENA1	P13587	1091 aa		5.15	□□□□□ -1.58
NGL3	YML118W	DOT6	P40059	670 aa	Known RBP	5.15	□□□□□ -1.58
NGL3	YML118W	EMP65	P40085	556 aa		5.15	□□□□□ -1.58
NGL3	YML118W	SAP185	P40856	1058 aa		5.15	□□□□□ -1.58
NGL3	YML118W	RET2	P43621	546 aa		5.15	□□□□□ -1.58
NGL3	YML118W	TAF1	P46677	1066 aa		5.15	□□□□□ -1.58
NGL3	YML118W	SLD3	P53135	668 aa		5.15	□□□□□ -1.58
NGL3	YML118W	ELA1	P53861	379 aa	Predicted RBP	5.15	□□□□□ -1.58
NGL3	YML118W	ENA2	Q01896	1091 aa		5.15	□□□□□ -1.58
NGL3	YML118W	DPH6	Q12429	685 aa		5.15	□□□□□ -1.58
NGL3	YML118W	ENA5	Q12691	1091 aa		5.15	□□□□□ -1.58
NGL3	YML118W	COX11	P19516	300 aa	Known RBP	5.14	□□□□□ -1.59
NGL3	YML118W	TSL1	P38427	1098 aa	Known RBP	5.14	□□□□□ -1.59
NGL3	YML118W	TDA3	P38758	523 aa		5.14	□□□□□ -1.59
NGL3	YML118W	RPN10	P38886	268 aa	Known RBP	5.14	□□□□□ -1.59
NGL3	YML118W	ICP55	P40051	511 aa		5.14	□□□□□ -1.59
NGL3	YML118W	IES1	P43579	692 aa		5.14	□□□□□ -1.59
NGL3	YML118W	ROG3	P43602	733 aa		5.14	□□□□□ -1.59
NGL3	YML118W	GYP7	P48365	746 aa		5.14	□□□□□ -1.59
NGL3	YML118W	MDM1	Q01846	1127 aa		5.14	□□□□□ -1.59
NGL3	YML118W	REH1	Q06709	432 aa		5.14	□□□□□ -1.59
NGL3	YML118W	PFK1	P16861	987 aa	Known RBP	5.13	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms