RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W ENV7Q12003 364 aa6.26□□□□□ -1.41
VPS36YLR417W YVC1Q12324 675 aa6.26□□□□□ -1.41
VPS36YLR417W SAM35P14693 329 aa6.25□□□□□ -1.41
VPS36YLR417W PCL2P25693 308 aa6.25□□□□□ -1.41
VPS36YLR417W STO1P34160 861 aaKnown RBP6.25□□□□□ -1.41
VPS36YLR417W MMM1P41800 426 aa6.25□□□□□ -1.41
VPS36YLR417W YKE2P52553 114 aa6.25□□□□□ -1.41
VPS36YLR417W GPG1P53130 126 aa6.25□□□□□ -1.41
VPS36YLR417W YDR514CQ04408 483 aa6.25□□□□□ -1.41
VPS36YLR417W YOR059CQ08448 450 aaKnown RBP6.25□□□□□ -1.41
VPS36YLR417W FAP7Q12055 197 aaPredicted RBP6.25□□□□□ -1.41
VPS36YLR417W TMA17Q12513 150 aa6.25□□□□□ -1.41
VPS36YLR417W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41not detected
VPS36YLR417W FUN30P31380 1131 aa6.25□□□□□ -1.41
VPS36YLR417W TYS1P36421 394 aaKnown RBP6.25□□□□□ -1.41
VPS36YLR417W ENP1P38333 483 aaKnown RBP6.25□□□□□ -1.41
VPS36YLR417W GIC1P38785 314 aa6.25□□□□□ -1.41
VPS36YLR417W TY4A-JP47023 414 aa6.25□□□□□ -1.41
VPS36YLR417W ALO1P54783 526 aaKnown RBP6.25□□□□□ -1.41
VPS36YLR417W RSC3Q06639 885 aa6.25□□□□□ -1.41
VPS36YLR417W MET7Q08645 548 aa6.25□□□□□ -1.41
VPS36YLR417W RAD18P10862 487 aa6.24□□□□□ -1.41
VPS36YLR417W ACE2P21192 770 aa6.24□□□□□ -1.41
VPS36YLR417W MET13P53128 600 aa6.24□□□□□ -1.41
VPS36YLR417W HFD1Q04458 532 aa6.24□□□□□ -1.41
VPS36YLR417W YOL057WQ08225 711 aa6.24□□□□□ -1.41
VPS36YLR417W NBA1Q08229 501 aaKnown RBP6.24□□□□□ -1.41
VPS36YLR417W SFL1P20134 766 aa6.23□□□□□ -1.41
VPS36YLR417W NUG1P40010 520 aaKnown RBP6.23□□□□□ -1.41
VPS36YLR417W CIT3P43635 486 aa6.23□□□□□ -1.41
VPS36YLR417W RSB1Q08417 382 aa6.23□□□□□ -1.41
VPS36YLR417W MPH2P0CD99 609 aa6.22□□□□□ -1.41
VPS36YLR417W RPC82P32349 654 aa6.22□□□□□ -1.41
VPS36YLR417W NPP2P39997 493 aa6.22□□□□□ -1.41
VPS36YLR417W YFL066CP43538 392 aa6.22□□□□□ -1.41
VPS36YLR417W REH1Q06709 432 aa6.22□□□□□ -1.41
VPS36YLR417W RSC58Q07979 502 aa6.22□□□□□ -1.41
VPS36YLR417W THI72Q08579 599 aa6.22□□□□□ -1.41
VPS36YLR417W TRK2P28584 889 aa6.22□□□□□ -1.41
VPS36YLR417W WHI3P34761 661 aaKnown RBP6.22□□□□□ -1.41
VPS36YLR417W TPM2P40414 161 aa6.22□□□□□ -1.41
VPS36YLR417W SNP1Q00916 300 aaPredicted RBP6.22□□□□□ -1.41
VPS36YLR417W TDA6Q06466 467 aa6.22□□□□□ -1.41
VPS36YLR417W MCD4P36051 919 aa6.21□□□□□ -1.42
VPS36YLR417W GPP1P41277 250 aaKnown RBP6.21□□□□□ -1.42
VPS36YLR417W MTQ2Q03920 221 aaPredicted RBP6.21□□□□□ -1.42
VPS36YLR417W OSW2Q12202 724 aa6.21□□□□□ -1.42
VPS36YLR417W SVS1Q12254 260 aa6.21□□□□□ -1.42
VPS36YLR417W NAM7P30771 971 aaKnown RBP6.2□□□□□ -1.42
VPS36YLR417W HOG1P32485 435 aa6.2□□□□□ -1.42
VPS36YLR417W PRY1P47032 299 aa6.2□□□□□ -1.42
VPS36YLR417W SFB2P53953 876 aa6.2□□□□□ -1.42
VPS36YLR417W RCM1P53972 490 aa6.2□□□□□ -1.42
VPS36YLR417W YPR196WQ06595 470 aa6.2□□□□□ -1.42
VPS36YLR417W PCM1P38628 557 aaKnown RBP6.19□□□□□ -1.42
VPS36YLR417W AKR1P39010 764 aa6.19□□□□□ -1.42
VPS36YLR417W YJR120WP47157 116 aa6.19□□□□□ -1.42
VPS36YLR417W HFM1P51979 1187 aa6.19□□□□□ -1.42
VPS36YLR417W PEX8P53248 589 aa6.19□□□□□ -1.42
VPS36YLR417W YBR071WP38243 211 aa6.19□□□□□ -1.42
VPS36YLR417W NOG2P53742 486 aaKnown RBP6.19□□□□□ -1.42
VPS36YLR417W GUD1Q07729 489 aa6.19□□□□□ -1.42
VPS36YLR417W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42not detected
VPS36YLR417W PER1P25625 357 aa6.18□□□□□ -1.42
VPS36YLR417W EUG1P32474 517 aa6.18□□□□□ -1.42
VPS36YLR417W SAF1P38352 637 aa6.18□□□□□ -1.42
VPS36YLR417W YAP1801P38856 637 aa6.18□□□□□ -1.42
VPS36YLR417W CKB2P38930 258 aa6.18□□□□□ -1.42
VPS36YLR417W SDH1Q00711 640 aa6.18□□□□□ -1.42
VPS36YLR417W ATG33Q06485 197 aa6.18□□□□□ -1.42
VPS36YLR417W TRE1Q08919 783 aa6.18□□□□□ -1.42
VPS36YLR417W GIN4Q12263 1142 aa6.18□□□□□ -1.42
VPS36YLR417W RFA1P22336 621 aaKnown RBP6.17□□□□□ -1.42
VPS36YLR417W ECM21P38167 1117 aaKnown RBP6.17□□□□□ -1.42
VPS36YLR417W PEX7P39108 375 aa6.17□□□□□ -1.42
VPS36YLR417W OYE3P41816 400 aaPredicted RBP6.17□□□□□ -1.42
VPS36YLR417W YJR096WP47137 282 aa6.17□□□□□ -1.42
VPS36YLR417W YDR215CQ12240 137 aa6.17□□□□□ -1.42
VPS36YLR417W MSB1P21339 1137 aaKnown RBP6.16□□□□□ -1.42
VPS36YLR417W DAL7P21826 554 aa6.16□□□□□ -1.42
VPS36YLR417W PRP19P32523 503 aaKnown RBP6.16□□□□□ -1.42
VPS36YLR417W RFC5P38251 354 aa6.16□□□□□ -1.42
VPS36YLR417W RPN10P38886 268 aaKnown RBP6.16□□□□□ -1.42
VPS36YLR417W NIT1P40447 199 aa6.16□□□□□ -1.42
VPS36YLR417W TAD1P53065 400 aa6.16□□□□□ -1.42
VPS36YLR417W TRE2Q08693 809 aa6.16□□□□□ -1.42
VPS36YLR417W TMA7Q3E764 64 aaKnown RBP6.16□□□□□ -1.42
VPS36YLR417W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
VPS36YLR417W HXT16P47185 567 aa6.16□□□□□ -1.42
VPS36YLR417W NSG2P53898 299 aa6.16□□□□□ -1.42
VPS36YLR417W COG6P53959 839 aa6.16□□□□□ -1.42
VPS36YLR417W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
VPS36YLR417W NHX1Q04121 633 aa6.16□□□□□ -1.42
VPS36YLR417W GUP2Q08929 609 aa6.16□□□□□ -1.42
VPS36YLR417W YTM1Q12024 460 aaPredicted RBP6.16□□□□□ -1.42
VPS36YLR417W TAT1P38085 619 aa6.15□□□□□ -1.42
VPS36YLR417W ALY2P47029 1046 aa6.15□□□□□ -1.42
VPS36YLR417W YMR187CQ03236 431 aa6.15□□□□□ -1.42
VPS36YLR417W NSI1Q12457 570 aa6.15□□□□□ -1.42
VPS36YLR417W NOT3P06102 836 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms