RNA–Protein interactions for RNA: YLR276C

DBP9, Transcript of DEAD-box protein required for 27S rRNA processing, yeast

Gene DBP9, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP9	YLR276C	TIF35	Q04067	274 aa	Known RBP	6.27	□□□□□ -1.41
DBP9	YLR276C	VPS20	Q04272	221 aa		6.27	□□□□□ -1.41
DBP9	YLR276C	GIC2	Q06648	383 aa		6.27	□□□□□ -1.41
DBP9	YLR276C	BRE1	Q07457	700 aa	Known RBP	6.27	□□□□□ -1.41
DBP9	YLR276C	PDC6	P26263	563 aa	Known RBP	6.26	□□□□□ -1.41
DBP9	YLR276C	HIR1	P32479	840 aa		6.26	□□□□□ -1.41
DBP9	YLR276C	HBS1	P32769	611 aa	Known RBP	6.26	□□□□□ -1.41
DBP9	YLR276C	PRE3	P38624	215 aa		6.26	□□□□□ -1.41
DBP9	YLR276C	RSM25	P40496	264 aa		6.26	□□□□□ -1.41
DBP9	YLR276C	SEC26	P41810	973 aa	Known RBP	6.26	□□□□□ -1.41
DBP9	YLR276C	YGR021W	P53212	290 aa		6.26	□□□□□ -1.41
DBP9	YLR276C	ATG16	Q03818	150 aa		6.26	□□□□□ -1.41
DBP9	YLR276C	PSR1	Q07800	427 aa		6.26	□□□□□ -1.41
DBP9	YLR276C	HBN1	Q96VH4	193 aa		6.26	□□□□□ -1.41
DBP9	YLR276C	DLD1	P32891	587 aa		6.26	□□□□□ -1.41
DBP9	YLR276C	YBR071W	P38243	211 aa		6.26	□□□□□ -1.41
DBP9	YLR276C	RGD1	P38339	666 aa		6.26	□□□□□ -1.41
DBP9	YLR276C	MBP1	P39678	833 aa		6.26	□□□□□ -1.41
DBP9	YLR276C	HYR1	P40581	163 aa	Known RBP	6.26	□□□□□ -1.41
DBP9	YLR276C	DAS1	P47005	663 aa		6.26	□□□□□ -1.41
DBP9	YLR276C	VMS1	Q04311	632 aa	Known RBP	6.26	□□□□□ -1.41
DBP9	YLR276C	BMT6	Q12291	365 aa		6.26	□□□□□ -1.41
DBP9	YLR276C	TY2B-LR1	P0C2J3	1770 aa		6.25	□□□□□ -1.41
DBP9	YLR276C	TY2B-F	P0CX63	1770 aa		6.25	□□□□□ -1.41
DBP9	YLR276C	TY2B-GR2	P0CX64	1770 aa		6.25	□□□□□ -1.41
DBP9	YLR276C	TY2B-C	P25384	1770 aa		6.25	□□□□□ -1.41
DBP9	YLR276C	TY2B-DR2	Q03494	1770 aa		6.25	□□□□□ -1.41
DBP9	YLR276C	TY1B-DR1	Q03855	1755 aa		6.25	□□□□□ -1.41
DBP9	YLR276C	TY2B-DR3	Q07791	1770 aa	Known RBP	6.25	□□□□□ -1.41
DBP9	YLR276C	TY2B-OR1	Q12113	1770 aa		6.25	□□□□□ -1.41
DBP9	YLR276C	TY2B-DR1	Q12472	1770 aa		6.25	□□□□□ -1.41
DBP9	YLR276C	TY2B-OR2	Q12501	1770 aa		6.25	□□□□□ -1.41
DBP9	YLR276C	TOP3	P13099	656 aa		6.25	□□□□□ -1.41
DBP9	YLR276C	YEF3	P16521	1044 aa	Known RBP	6.25	□□□□□ -1.41
DBP9	YLR276C	MRPS28	P21771	286 aa		6.25	□□□□□ -1.41
DBP9	YLR276C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	6.25	□□□□□ -1.41	not detected
DBP9	YLR276C	LAM1	P38851	1228 aa		6.25	□□□□□ -1.41
DBP9	YLR276C	RGA1	P39083	1007 aa		6.25	□□□□□ -1.41
DBP9	YLR276C	ERP2	P39704	215 aa		6.25	□□□□□ -1.41
DBP9	YLR276C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	6.25	□□□□□ -1.41	not detected
DBP9	YLR276C	RKM4	Q12504	494 aa		6.25	□□□□□ -1.41
DBP9	YLR276C	PDR12	Q02785	1511 aa		6.25	□□□□□ -1.41
DBP9	YLR276C	DPB3	P27344	201 aa		6.24	□□□□□ -1.41
DBP9	YLR276C	EUG1	P32474	517 aa		6.24	□□□□□ -1.41
DBP9	YLR276C	ELM1	P32801	640 aa		6.24	□□□□□ -1.41
DBP9	YLR276C	EXO5	P38289	585 aa		6.24	□□□□□ -1.41
DBP9	YLR276C	TOM71	P38825	639 aa	Known RBP	6.24	□□□□□ -1.41
DBP9	YLR276C	COG4	Q06096	861 aa		6.24	□□□□□ -1.41
DBP9	YLR276C	SES1	P07284	462 aa	Known RBP	6.23	□□□□□ -1.41
DBP9	YLR276C	HEL1	P36113	551 aa		6.23	□□□□□ -1.41
DBP9	YLR276C	PIM1	P36775	1133 aa		6.23	□□□□□ -1.41
DBP9	YLR276C	GPP1	P41277	250 aa	Known RBP	6.23	□□□□□ -1.41
DBP9	YLR276C	YNR040W	P53736	256 aa		6.23	□□□□□ -1.41
DBP9	YLR276C	INP2	Q03824	705 aa		6.23	□□□□□ -1.41
DBP9	YLR276C	YDR338C	Q05497	695 aa		6.23	□□□□□ -1.41
DBP9	YLR276C	CFT2	Q12102	859 aa	Predicted RBP	6.23	□□□□□ -1.41
DBP9	YLR276C	TY2B-B	Q12491	1770 aa		6.23	□□□□□ -1.41
DBP9	YLR276C	CCC2	P38995	1004 aa		6.23	□□□□□ -1.41
DBP9	YLR276C	MGS1	P40151	587 aa		6.23	□□□□□ -1.41
DBP9	YLR276C	YRB1	P41920	201 aa	Known RBP	6.23	□□□□□ -1.41
DBP9	YLR276C	YGL176C	P46945	554 aa		6.23	□□□□□ -1.41
DBP9	YLR276C	YNL034W	P53963	612 aa		6.23	□□□□□ -1.41
DBP9	YLR276C	YNL018C	P53976	612 aa		6.23	□□□□□ -1.41
DBP9	YLR276C	FAP7	Q12055	197 aa	Predicted RBP	6.23	□□□□□ -1.41
DBP9	YLR276C	VPS5	Q92331	675 aa		6.23	□□□□□ -1.41
DBP9	YLR276C	DOP1	Q03921	1698 aa		6.22	□□□□□ -1.41
DBP9	YLR276C	RTC1	Q08281	1341 aa		6.22	□□□□□ -1.41
DBP9	YLR276C	BRF1	P29056	596 aa		6.22	□□□□□ -1.41
DBP9	YLR276C	BEM4	P39011	633 aa		6.22	□□□□□ -1.41
DBP9	YLR276C	SDA1	P53313	767 aa	Known RBP	6.22	□□□□□ -1.41
DBP9	YLR276C	JJJ1	P53863	590 aa		6.22	□□□□□ -1.41
DBP9	YLR276C	TIM11	P81449	96 aa	Predicted RBP	6.22	□□□□□ -1.41
DBP9	YLR276C	NYV1	Q12255	253 aa		6.22	□□□□□ -1.41
DBP9	YLR276C	GLO4	Q12320	285 aa		6.22	□□□□□ -1.41
DBP9	YLR276C	MLP1	Q02455	1875 aa	Known RBP	6.22	□□□□□ -1.41
DBP9	YLR276C	HVG1	P0CE11	249 aa		6.21	□□□□□ -1.41
DBP9	YLR276C	BIK1	P11709	440 aa		6.21	□□□□□ -1.41
DBP9	YLR276C	RGP1	P16664	663 aa		6.21	□□□□□ -1.41
DBP9	YLR276C	SYP1	P25623	870 aa	Known RBP	6.21	□□□□□ -1.41
DBP9	YLR276C	YKL107W	P34251	309 aa		6.21	□□□□□ -1.41
DBP9	YLR276C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	6.21	□□□□□ -1.41	not detected
DBP9	YLR276C	AHP1	P38013	176 aa	Known RBP	6.21	□□□□□ -1.41
DBP9	YLR276C	TY4A-J	P47023	414 aa		6.21	□□□□□ -1.41
DBP9	YLR276C	RRP46	P53256	223 aa	Predicted RBP	6.21	□□□□□ -1.41
DBP9	YLR276C	RAT1	Q02792	1006 aa	Known RBP	6.21	□□□□□ -1.41
DBP9	YLR276C	HED1	Q03937	162 aa		6.21	□□□□□ -1.41
DBP9	YLR276C	CMS1	Q07897	291 aa	Known RBP	6.21	□□□□□ -1.41
DBP9	YLR276C	MPD2	Q99316	277 aa		6.21	□□□□□ -1.41
DBP9	YLR276C	LYS2	P07702	1392 aa		6.21	□□□□□ -1.42
DBP9	YLR276C	YML133C	Q03099	1374 aa		6.21	□□□□□ -1.42
DBP9	YLR276C	YLL067C	Q07888	1374 aa		6.21	□□□□□ -1.42
DBP9	YLR276C	YLL066C	Q99208	1374 aa		6.21	□□□□□ -1.42
DBP9	YLR276C	SST2	P11972	698 aa	Known RBP	6.21	□□□□□ -1.42
DBP9	YLR276C	PET123	P17558	318 aa		6.21	□□□□□ -1.42
DBP9	YLR276C	RME1	P32338	300 aa	Known RBP	6.21	□□□□□ -1.42
DBP9	YLR276C	PLC1	P32383	869 aa		6.21	□□□□□ -1.42
DBP9	YLR276C	TYS1	P36421	394 aa	Known RBP	6.21	□□□□□ -1.42
DBP9	YLR276C	BAP2	P38084	609 aa		6.21	□□□□□ -1.42
DBP9	YLR276C	EXO84	P38261	753 aa		6.21	□□□□□ -1.42
DBP9	YLR276C	PAN5	P38787	379 aa		6.21	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 1029.9 ms