RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeastyeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PWP1YLR196W YKL063CP35725 167 aa5.6□□□□□ -1.51
PWP1YLR196W YKL222CP35995 705 aa5.6□□□□□ -1.51
PWP1YLR196W MAK5P38112 773 aaPredicted RBP5.6□□□□□ -1.51
PWP1YLR196W YBL028CP38202 106 aa5.6□□□□□ -1.51
PWP1YLR196W SMC2P38989 1170 aaKnown RBP5.6□□□□□ -1.51
PWP1YLR196W MPT5P39016 859 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
PWP1YLR196W RVS167P39743 482 aaKnown RBP5.6□□□□□ -1.51
PWP1YLR196W FYV8P46949 817 aaKnown RBP5.6□□□□□ -1.51
PWP1YLR196W SGM1P47166 707 aa5.6□□□□□ -1.51
PWP1YLR196W TRF5P48561 642 aaKnown RBP5.6□□□□□ -1.51
PWP1YLR196W UBA2P52488 636 aa5.6□□□□□ -1.51
PWP1YLR196W IPI3P53877 555 aa5.6□□□□□ -1.51
PWP1YLR196W LAP3Q01532 483 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
PWP1YLR196W DCS1Q06151 350 aa5.6□□□□□ -1.51
PWP1YLR196W MAG2Q06436 670 aaKnown RBP5.6□□□□□ -1.51
PWP1YLR196W SUB2Q07478 446 aaKnown RBP5.6□□□□□ -1.51
PWP1YLR196W YOR238WQ08634 303 aa5.6□□□□□ -1.51
PWP1YLR196W MET7Q08645 548 aa5.6□□□□□ -1.51
PWP1YLR196W YOR289WQ12012 251 aaPredicted RBP5.6□□□□□ -1.51
PWP1YLR196W GAL1P04385 528 aa5.6□□□□□ -1.51
PWP1YLR196W PGI1P12709 554 aaKnown RBP5.6□□□□□ -1.51
PWP1YLR196W VPS1P21576 704 aaKnown RBP5.6□□□□□ -1.51
PWP1YLR196W DAL80P26343 269 aa5.6□□□□□ -1.51
PWP1YLR196W BAP2P38084 609 aa5.6□□□□□ -1.51
PWP1YLR196W PBY1P38254 753 aa5.6□□□□□ -1.51
PWP1YLR196W YHR020WP38708 688 aaKnown RBP5.6□□□□□ -1.51
PWP1YLR196W YHL012WP38709 493 aa5.6□□□□□ -1.51
PWP1YLR196W SBE2P42223 864 aaKnown RBP5.6□□□□□ -1.51
PWP1YLR196W NUP85P46673 744 aa5.6□□□□□ -1.51
PWP1YLR196W YGR122WP53272 402 aa5.6□□□□□ -1.51
PWP1YLR196W YGR266WP53326 701 aa5.6□□□□□ -1.51
PWP1YLR196W HOL1P53389 586 aa5.6□□□□□ -1.51
PWP1YLR196W BET4Q00618 327 aa5.6□□□□□ -1.51
PWP1YLR196W RRP17Q04031 235 aaPredicted RBP5.6□□□□□ -1.51
PWP1YLR196W POB3Q04636 552 aaKnown RBP5.6□□□□□ -1.51
PWP1YLR196W MMR1Q06324 491 aa5.6□□□□□ -1.51
PWP1YLR196W TLG2Q08144 397 aa5.6□□□□□ -1.51
PWP1YLR196W YPL191CQ08930 360 aa5.6□□□□□ -1.51
PWP1YLR196W MED4Q12343 284 aa5.6□□□□□ -1.51
PWP1YLR196W HTZ1Q12692 134 aaKnown RBP5.6□□□□□ -1.51
PWP1YLR196W GLK1P17709 500 aaKnown RBP5.59□□□□□ -1.51
PWP1YLR196W YAP1P19880 650 aaKnown RBP5.59□□□□□ -1.51
PWP1YLR196W MEF1P25039 761 aa5.59□□□□□ -1.51
PWP1YLR196W POL4P25615 582 aa5.59□□□□□ -1.51
PWP1YLR196W EUG1P32474 517 aa5.59□□□□□ -1.51
PWP1YLR196W KRE6P32486 720 aa5.59□□□□□ -1.51
PWP1YLR196W DUR3P33413 735 aa5.59□□□□□ -1.51
PWP1YLR196W YKR018CP36114 725 aa5.59□□□□□ -1.51
PWP1YLR196W YAP1801P38856 637 aa5.59□□□□□ -1.51
PWP1YLR196W CCT3P39077 534 aaKnown RBP5.59□□□□□ -1.51
PWP1YLR196W ATP22P50273 684 aaPredicted RBP5.59□□□□□ -1.51
PWP1YLR196W MIG2P53035 382 aa5.59□□□□□ -1.51
PWP1YLR196W MPS2P53159 387 aa5.59□□□□□ -1.51
PWP1YLR196W MDR1P53258 950 aa5.59□□□□□ -1.51
PWP1YLR196W SSL2Q00578 843 aa5.59□□□□□ -1.51
PWP1YLR196W CUS1Q02554 436 aaPredicted RBP5.59□□□□□ -1.51
PWP1YLR196W HRQ1Q05549 1077 aa5.59□□□□□ -1.51
PWP1YLR196W CRN1Q06440 651 aa5.59□□□□□ -1.51
PWP1YLR196W YLR352WQ06479 807 aa5.59□□□□□ -1.51
PWP1YLR196W CMS1Q07897 291 aaKnown RBP5.59□□□□□ -1.51
PWP1YLR196W MRN1Q08925 612 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
PWP1YLR196W YKL068W-AQ3E826 78 aa5.59□□□□□ -1.51
PWP1YLR196W RNR2P09938 399 aaKnown RBP5.58□□□□□ -1.52
PWP1YLR196W RAD24P32641 659 aa5.58□□□□□ -1.52
PWP1YLR196W NTH2P35172 780 aa5.58□□□□□ -1.52
PWP1YLR196W YSW1P38280 609 aa5.58□□□□□ -1.52
PWP1YLR196W MBP1P39678 833 aa5.58□□□□□ -1.52
PWP1YLR196W XKS1P42826 600 aa5.58□□□□□ -1.52
PWP1YLR196W HGH1P48362 394 aaKnown RBP5.58□□□□□ -1.52
PWP1YLR196W ATG1P53104 897 aa5.58□□□□□ -1.52
PWP1YLR196W HST1P53685 503 aa5.58□□□□□ -1.52
PWP1YLR196W ALF1P53904 254 aa5.58□□□□□ -1.52
PWP1YLR196W UBP2Q01476 1272 aa5.58□□□□□ -1.52
PWP1YLR196W CWC15Q03772 175 aaKnown RBP5.58□□□□□ -1.52
PWP1YLR196W TAF11Q04226 346 aa5.58□□□□□ -1.52
PWP1YLR196W DON1Q05610 365 aa5.58□□□□□ -1.52
PWP1YLR196W SYO1Q07395 620 aa5.58□□□□□ -1.52
PWP1YLR196W TRM8Q12009 286 aa5.58□□□□□ -1.52
PWP1YLR196W RTP1Q12751 981 aa5.58□□□□□ -1.52
PWP1YLR196W LYS2P07702 1392 aa5.58□□□□□ -1.52
PWP1YLR196W ADE6P38972 1358 aaKnown RBP5.58□□□□□ -1.52
PWP1YLR196W MST1P07236 462 aa5.57□□□□□ -1.52
PWP1YLR196W RPS19AP07280 144 aaKnown RBP5.57□□□□□ -1.52
PWP1YLR196W RPS19BP07281 144 aaPredicted RBP5.57□□□□□ -1.52
PWP1YLR196W ILS1P09436 1072 aaKnown RBP5.57□□□□□ -1.52
PWP1YLR196W TRL1P09880 827 aaKnown RBP5.57□□□□□ -1.52
PWP1YLR196W YML002WP0CF17 737 aa5.57□□□□□ -1.52
PWP1YLR196W DSF1P0CX08 502 aa5.57□□□□□ -1.52
PWP1YLR196W YNR073CP0CX09 502 aa5.57□□□□□ -1.52
PWP1YLR196W PWP1P21304 576 aaKnown RBP5.57□□□□□ -1.52
PWP1YLR196W RSC6P25632 483 aa5.57□□□□□ -1.52
PWP1YLR196W HEM3P28789 327 aa5.57□□□□□ -1.52
PWP1YLR196W AFR1P33304 620 aa5.57□□□□□ -1.52
PWP1YLR196W STO1P34160 861 aaKnown RBP5.57□□□□□ -1.52
PWP1YLR196W DID4P36108 232 aa5.57□□□□□ -1.52
PWP1YLR196W ECM4P36156 370 aa5.57□□□□□ -1.52
PWP1YLR196W REI1P38344 393 aaPredicted RBP5.57□□□□□ -1.52
PWP1YLR196W SIP3P38717 1229 aa5.57□□□□□ -1.52
PWP1YLR196W PIH1P38768 344 aa5.57□□□□□ -1.52
PWP1YLR196W NUP60P39705 539 aa5.57□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms