RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C CDC34P14682 295 aa3.48□□□□□ -1.85
SHE2YKL130C KAR4P25583 335 aa3.48□□□□□ -1.85
SHE2YKL130C ATG19P35193 415 aa3.48□□□□□ -1.85
SHE2YKL130C GIC1P38785 314 aa3.48□□□□□ -1.85
SHE2YKL130C SNF7P39929 240 aaKnown RBP3.48□□□□□ -1.85
SHE2YKL130C NCS6P53088 359 aa3.48□□□□□ -1.85
SHE2YKL130C RRP15Q06511 250 aaPredicted RBP3.48□□□□□ -1.85
SHE2YKL130C WHI4Q07655 649 aaKnown RBP3.48□□□□□ -1.85
SHE2YKL130C YLR040CQ07988 224 aa3.48□□□□□ -1.85
SHE2YKL130C YOL073CQ08232 322 aa3.48□□□□□ -1.85
SHE2YKL130C URM1P40554 99 aaPredicted RBP3.47□□□□□ -1.85
SHE2YKL130C OYE2Q03558 400 aaKnown RBP3.47□□□□□ -1.85
SHE2YKL130C LAS17Q12446 633 aa3.47□□□□□ -1.85
SHE2YKL130C YMR206WQ03695 313 aa3.46□□□□□ -1.86
SHE2YKL130C GUP2Q08929 609 aa3.46□□□□□ -1.86
SHE2YKL130C PIN4P34217 668 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
SHE2YKL130C KTR4P38131 464 aa3.45□□□□□ -1.86
SHE2YKL130C MET10P39692 1035 aa3.45□□□□□ -1.86
SHE2YKL130C STU2P46675 888 aa3.45□□□□□ -1.86
SHE2YKL130C SFB2P53953 876 aa3.45□□□□□ -1.86
SHE2YKL130C SRP1Q02821 542 aaKnown RBP3.45□□□□□ -1.86
SHE2YKL130C YPR196WQ06595 470 aa3.45□□□□□ -1.86
SHE2YKL130C MCH5Q08777 521 aa3.45□□□□□ -1.86
SHE2YKL130C ERG4P25340 473 aa3.44□□□□□ -1.86
SHE2YKL130C HEM3P28789 327 aa3.44□□□□□ -1.86
SHE2YKL130C BUL1P48524 976 aa3.44□□□□□ -1.86
SHE2YKL130C STB4P50104 949 aa3.44□□□□□ -1.86
SHE2YKL130C NPL3Q01560 414 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
SHE2YKL130C ESC2Q06340 456 aa3.44□□□□□ -1.86
SHE2YKL130C AIM44Q99299 758 aa3.44□□□□□ -1.86
SHE2YKL130C SED4P25365 1065 aa3.43□□□□□ -1.86
SHE2YKL130C ASF1P32447 279 aa3.43□□□□□ -1.86
SHE2YKL130C MNR2P35724 969 aa3.43□□□□□ -1.86
SHE2YKL130C NPP2P39997 493 aa3.43□□□□□ -1.86
SHE2YKL130C NOP7P53261 605 aaKnown RBP3.43□□□□□ -1.86
SHE2YKL130C TIM44Q01852 431 aa3.43□□□□□ -1.86
SHE2YKL130C TMN2Q04562 672 aa3.43□□□□□ -1.86
SHE2YKL130C OMS1Q06668 471 aa3.43□□□□□ -1.86
SHE2YKL130C UPC2Q12151 913 aa3.43□□□□□ -1.86
SHE2YKL130C RPC82P32349 654 aa3.42□□□□□ -1.86
SHE2YKL130C ABD1P32783 436 aaPredicted RBP3.42□□□□□ -1.86
SHE2YKL130C SNU71P53207 620 aaKnown RBP3.42□□□□□ -1.86
SHE2YKL130C RNT1Q02555 471 aa3.42□□□□□ -1.86
SHE2YKL130C DUS3Q06053 668 aaKnown RBP3.42□□□□□ -1.86
SHE2YKL130C ACF2Q12168 779 aa3.42□□□□□ -1.86
SHE2YKL130C TRP4P07285 380 aaPredicted RBP3.41□□□□□ -1.86
SHE2YKL130C CDC12P32468 407 aaKnown RBP3.41□□□□□ -1.86
SHE2YKL130C ATF1P40353 525 aa3.41□□□□□ -1.86
SHE2YKL130C KRI1P42846 591 aaKnown RBP3.41□□□□□ -1.86
SHE2YKL130C QRI1P43123 477 aaKnown RBP3.41□□□□□ -1.86
SHE2YKL130C RAI1P53063 387 aaKnown RBP3.41□□□□□ -1.86
SHE2YKL130C MBP1P39678 833 aa3.4□□□□□ -1.87
SHE2YKL130C YER158CP40095 573 aa3.4□□□□□ -1.87
SHE2YKL130C FAA4P47912 694 aaKnown RBP3.4□□□□□ -1.87
SHE2YKL130C YGR053CP53234 283 aa3.4□□□□□ -1.87
SHE2YKL130C LGE1Q02796 332 aaKnown RBP3.4□□□□□ -1.87
SHE2YKL130C GDE1Q02979 1223 aa3.4□□□□□ -1.87
SHE2YKL130C IRC10Q08118 586 aa3.4□□□□□ -1.87
SHE2YKL130C ALG7P07286 448 aa3.39□□□□□ -1.87
SHE2YKL130C GYP7P48365 746 aa3.39□□□□□ -1.87
SHE2YKL130C MUK1Q02866 612 aa3.39□□□□□ -1.87
SHE2YKL130C BDF2Q07442 638 aa3.39□□□□□ -1.87
SHE2YKL130C PPR1P07272 904 aaPredicted RBP3.38□□□□□ -1.87
SHE2YKL130C STE14P32584 239 aa3.38□□□□□ -1.87
SHE2YKL130C GND2P53319 492 aa3.38□□□□□ -1.87
SHE2YKL130C FAL1Q12099 399 aaKnown RBP3.38□□□□□ -1.87
SHE2YKL130C TRM13Q12383 476 aa3.38□□□□□ -1.87
SHE2YKL130C NOT3P06102 836 aaKnown RBP3.37□□□□□ -1.87
SHE2YKL130C CDC48P25694 835 aaKnown RBP3.37□□□□□ -1.87
SHE2YKL130C SBA1P28707 216 aaKnown RBP3.37□□□□□ -1.87
SHE2YKL130C PPH3P32345 308 aa3.37□□□□□ -1.87
SHE2YKL130C MTH1P35198 433 aa3.37□□□□□ -1.87
SHE2YKL130C CUE2P36075 443 aaKnown RBP3.37□□□□□ -1.87
SHE2YKL130C SPC42P36094 363 aa3.37□□□□□ -1.87
SHE2YKL130C VPS30Q02948 557 aa3.37□□□□□ -1.87
SHE2YKL130C YDR306CQ06640 478 aa3.37□□□□□ -1.87
SHE2YKL130C PEX19Q07418 342 aa3.37□□□□□ -1.87
SHE2YKL130C AGP1P25376 633 aa3.36□□□□□ -1.87
SHE2YKL130C YKR078WP36158 585 aaKnown RBP3.36□□□□□ -1.87
SHE2YKL130C TSL1P38427 1098 aaKnown RBP3.36□□□□□ -1.87
SHE2YKL130C CWC24P53769 259 aa3.36□□□□□ -1.87
SHE2YKL130C SLU7Q02775 382 aaKnown RBP3.36□□□□□ -1.87
SHE2YKL130C SSL1Q04673 461 aaPredicted RBP3.36□□□□□ -1.87
SHE2YKL130C HBT1Q07653 1046 aaKnown RBP3.36□□□□□ -1.87
SHE2YKL130C MET3P08536 511 aa3.34□□□□□ -1.87
SHE2YKL130C NPP1P25353 742 aa3.34□□□□□ -1.87
SHE2YKL130C SEC21P32074 935 aaKnown RBP3.34□□□□□ -1.87
SHE2YKL130C AAR2P32357 355 aaPredicted RBP3.34□□□□□ -1.87
SHE2YKL130C STE13P33894 931 aa3.34□□□□□ -1.87
SHE2YKL130C PAM1P37304 830 aaKnown RBP3.34□□□□□ -1.87
SHE2YKL130C GUS1P46655 708 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87not detected
SHE2YKL130C FRE5Q08908 694 aa3.34□□□□□ -1.87
SHE2YKL130C ADE8P04161 214 aa3.33□□□□□ -1.88
SHE2YKL130C CLN2P20438 545 aa3.33□□□□□ -1.88
SHE2YKL130C RFA1P22336 621 aaKnown RBP3.33□□□□□ -1.88
SHE2YKL130C RPD3P32561 433 aa3.33□□□□□ -1.88
SHE2YKL130C VBA5P36172 582 aa3.33□□□□□ -1.88
SHE2YKL130C PPS1P38148 807 aa3.33□□□□□ -1.88
SHE2YKL130C YIL108WP40483 696 aaKnown RBP3.33□□□□□ -1.88
SHE2YKL130C SNM1P40993 198 aa3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms