RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W UGA2P38067 497 aa4.54□□□□□ -1.68
SEC4YFL005W CCZ1P38273 704 aa4.54□□□□□ -1.68
SEC4YFL005W LAM1P38851 1228 aa4.54□□□□□ -1.68
SEC4YFL005W CCC2P38995 1004 aa4.54□□□□□ -1.68
SEC4YFL005W SIT1P39980 628 aa4.54□□□□□ -1.68
SEC4YFL005W SPT20P50875 604 aa4.54□□□□□ -1.68
SEC4YFL005W NPL3Q01560 414 aaKnown RBP RIP-Chip data4.54□□□□□ -1.68not detected
SEC4YFL005W DUS3Q06053 668 aaKnown RBP4.54□□□□□ -1.68
SEC4YFL005W SGD1Q06132 899 aa4.54□□□□□ -1.68
SEC4YFL005W PUS9Q12069 462 aa4.54□□□□□ -1.68
SEC4YFL005W HBN1Q96VH4 193 aa4.54□□□□□ -1.68
SEC4YFL005W ADE8P04161 214 aa4.53□□□□□ -1.68
SEC4YFL005W MEF2P39677 819 aa4.53□□□□□ -1.68
SEC4YFL005W RTA1P53047 317 aa4.53□□□□□ -1.68
SEC4YFL005W NBA1Q08229 501 aaKnown RBP4.53□□□□□ -1.68
SEC4YFL005W SPS1P08458 490 aa4.52□□□□□ -1.69
SEC4YFL005W ERR1P0CX10 437 aa4.52□□□□□ -1.69
SEC4YFL005W ERR2P0CX11 437 aa4.52□□□□□ -1.69
SEC4YFL005W THI4P32318 326 aa4.52□□□□□ -1.69
SEC4YFL005W PPH3P32345 308 aa4.52□□□□□ -1.69
SEC4YFL005W CDC12P32468 407 aaKnown RBP4.52□□□□□ -1.69
SEC4YFL005W YKL151CP36059 337 aa4.52□□□□□ -1.69
SEC4YFL005W BET3P36149 193 aa4.52□□□□□ -1.69
SEC4YFL005W FPR3P38911 411 aaKnown RBP4.52□□□□□ -1.69
SEC4YFL005W SAH1P39954 449 aaKnown RBP4.52□□□□□ -1.69
SEC4YFL005W GCN5Q03330 439 aa4.52□□□□□ -1.69
SEC4YFL005W HRQ1Q05549 1077 aa4.52□□□□□ -1.69
SEC4YFL005W YLL058WQ12198 575 aa4.52□□□□□ -1.69
SEC4YFL005W DOM34P33309 386 aa4.51□□□□□ -1.69
SEC4YFL005W YBR284WP38150 797 aa4.51□□□□□ -1.69
SEC4YFL005W POB3Q04636 552 aaKnown RBP4.51□□□□□ -1.69
SEC4YFL005W ATG13Q06628 738 aa4.51□□□□□ -1.69
SEC4YFL005W RSB1Q08417 382 aa4.51□□□□□ -1.69
SEC4YFL005W BI4P03879 638 aa4.5□□□□□ -1.69
SEC4YFL005W PET10P36139 283 aa4.5□□□□□ -1.69
SEC4YFL005W YRO2P38079 344 aa4.5□□□□□ -1.69
SEC4YFL005W RRT14P40470 206 aa4.5□□□□□ -1.69
SEC4YFL005W UBP6P43593 499 aaKnown RBP4.5□□□□□ -1.69
SEC4YFL005W MTC3P53077 123 aa4.5□□□□□ -1.69
SEC4YFL005W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
SEC4YFL005W LCD1Q04377 747 aa4.5□□□□□ -1.69
SEC4YFL005W YPR071WQ12346 211 aa4.5□□□□□ -1.69
SEC4YFL005W TOP3P13099 656 aa4.49□□□□□ -1.69
SEC4YFL005W MNN1P39106 762 aa4.49□□□□□ -1.69
SEC4YFL005W MSE1P48525 536 aa4.49□□□□□ -1.69
SEC4YFL005W UTP14Q04500 899 aaKnown RBP4.49□□□□□ -1.69
SEC4YFL005W MDM38Q08179 573 aa4.49□□□□□ -1.69
SEC4YFL005W RIB2Q12362 591 aaKnown RBP4.49□□□□□ -1.69
SEC4YFL005W TOM70P07213 617 aaKnown RBP4.48□□□□□ -1.69
SEC4YFL005W MSD1P15179 658 aaKnown RBP4.48□□□□□ -1.69
SEC4YFL005W ACE2P21192 770 aa4.48□□□□□ -1.69
SEC4YFL005W MSH2P25847 964 aa4.48□□□□□ -1.69
SEC4YFL005W YKR078WP36158 585 aaKnown RBP4.48□□□□□ -1.69
SEC4YFL005W GDH3P39708 457 aa4.48□□□□□ -1.69
SEC4YFL005W GYP7P48365 746 aa4.48□□□□□ -1.69
SEC4YFL005W HSV2P50079 448 aaPredicted RBP4.48□□□□□ -1.69
SEC4YFL005W SLI1P53304 468 aa4.48□□□□□ -1.69
SEC4YFL005W BUL2Q03758 920 aaKnown RBP4.48□□□□□ -1.69
SEC4YFL005W SVS1Q12254 260 aa4.48□□□□□ -1.69
SEC4YFL005W AFR1P33304 620 aa4.47□□□□□ -1.69
SEC4YFL005W CCM1P48237 864 aaPredicted RBP4.47□□□□□ -1.69
SEC4YFL005W SRT1Q03175 343 aa4.47□□□□□ -1.69
SEC4YFL005W UGO1Q03327 502 aa4.47□□□□□ -1.69
SEC4YFL005W URN1Q06525 465 aaKnown RBP4.47□□□□□ -1.69
SEC4YFL005W CYC1P00044 109 aaPredicted RBP4.46□□□□□ -1.7
SEC4YFL005W SRM1P21827 482 aa4.46□□□□□ -1.7
SEC4YFL005W NPP1P25353 742 aa4.46□□□□□ -1.7
SEC4YFL005W FUN30P31380 1131 aa4.46□□□□□ -1.7
SEC4YFL005W REC104P33323 182 aa4.46□□□□□ -1.7
SEC4YFL005W RFC5P38251 354 aa4.46□□□□□ -1.7
SEC4YFL005W TSL1P38427 1098 aaKnown RBP4.46□□□□□ -1.7
SEC4YFL005W NPP2P39997 493 aa4.46□□□□□ -1.7
SEC4YFL005W TOK1P40310 691 aa4.46□□□□□ -1.7
SEC4YFL005W SEC26P41810 973 aaKnown RBP4.46□□□□□ -1.7
SEC4YFL005W HFM1P51979 1187 aa4.46□□□□□ -1.7
SEC4YFL005W XYL2Q07993 356 aa4.46□□□□□ -1.7
SEC4YFL005W HCM1P25364 564 aa4.45□□□□□ -1.7
SEC4YFL005W RPC82P32349 654 aa4.45□□□□□ -1.7
SEC4YFL005W ERT1P38140 529 aa4.45□□□□□ -1.7
SEC4YFL005W YBR238CP38330 731 aaKnown RBP4.45□□□□□ -1.7
SEC4YFL005W GIC1P38785 314 aa4.45□□□□□ -1.7
SEC4YFL005W ALG2P43636 503 aa4.45□□□□□ -1.7
SEC4YFL005W YKE2P52553 114 aa4.45□□□□□ -1.7
SEC4YFL005W MAL11P53048 616 aa4.45□□□□□ -1.7
SEC4YFL005W DUS4Q06063 367 aa4.45□□□□□ -1.7
SEC4YFL005W OSW2Q12202 724 aa4.45□□□□□ -1.7
SEC4YFL005W CDC48P25694 835 aaKnown RBP4.44□□□□□ -1.7
SEC4YFL005W PEX6P33760 1030 aa4.44□□□□□ -1.7
SEC4YFL005W YER158CP40095 573 aa4.44□□□□□ -1.7
SEC4YFL005W CTF4Q01454 927 aa4.44□□□□□ -1.7
SEC4YFL005W YML122CQ03207 126 aa4.44□□□□□ -1.7
SEC4YFL005W ROT1Q03691 256 aa4.44□□□□□ -1.7
SEC4YFL005W NTG2Q08214 380 aa4.44□□□□□ -1.7
SEC4YFL005W MDM12Q92328 271 aa4.44□□□□□ -1.7
SEC4YFL005W NOP14Q99207 810 aaKnown RBP4.44□□□□□ -1.7
SEC4YFL005W PHR1P05066 565 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
SEC4YFL005W KIN2P13186 1147 aaKnown RBP4.43□□□□□ -1.7
SEC4YFL005W CMP2P14747 604 aa4.43□□□□□ -1.7
SEC4YFL005W RAD53P22216 821 aa4.43□□□□□ -1.7
SEC4YFL005W APL1P27351 700 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms