RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C TCO89Q08921 799 aa11.89□□□□□ -0.51
SPC25YER018C MED1Q12321 566 aa11.89□□□□□ -0.51
SPC25YER018C TRK2P28584 889 aa11.88□□□□□ -0.51
SPC25YER018C RPC25P35718 212 aa11.88□□□□□ -0.51
SPC25YER018C MPE1P35728 441 aaKnown RBP11.88□□□□□ -0.51
SPC25YER018C CTM1P38818 585 aa11.88□□□□□ -0.51
SPC25YER018C AVT1P47082 602 aa11.88□□□□□ -0.51
SPC25YER018C ROD1Q02805 837 aa11.88□□□□□ -0.51
SPC25YER018C YOR131CQ12486 218 aa11.88□□□□□ -0.51
SPC25YER018C MAK16P10962 306 aaPredicted RBP11.87□□□□□ -0.51
SPC25YER018C PHO8P11491 566 aa11.87□□□□□ -0.51
SPC25YER018C SEC65P29478 273 aa11.87□□□□□ -0.51
SPC25YER018C YSC83P32792 385 aa11.87□□□□□ -0.51
SPC25YER018C VPS35P34110 944 aa11.87□□□□□ -0.51
SPC25YER018C YEL1P34225 687 aa11.87□□□□□ -0.51
SPC25YER018C KSP1P38691 1029 aaKnown RBP11.87□□□□□ -0.51
SPC25YER018C SKP2P42843 763 aa11.87□□□□□ -0.51
SPC25YER018C FYV8P46949 817 aaKnown RBP11.87□□□□□ -0.51
SPC25YER018C VID30P53076 958 aa11.87□□□□□ -0.51
SPC25YER018C COQ9Q05779 260 aa11.87□□□□□ -0.51
SPC25YER018C CUR1Q06469 252 aa11.87□□□□□ -0.51
SPC25YER018C SPO75Q07798 868 aa11.87□□□□□ -0.51
SPC25YER018C SUT2Q12286 268 aa11.87□□□□□ -0.51
SPC25YER018C SCP160P06105 1222 aaKnown RBP RIP-Chip data11.86□□□□□ -0.51not detected
SPC25YER018C KIN82P25341 720 aa11.86□□□□□ -0.51
SPC25YER018C COT1P32798 439 aa11.86□□□□□ -0.51
SPC25YER018C BCS1P32839 456 aa11.86□□□□□ -0.51
SPC25YER018C LEO1P38439 464 aa11.86□□□□□ -0.51
SPC25YER018C ACF4P47129 309 aa11.86□□□□□ -0.51
SPC25YER018C ULP1Q02724 621 aa11.86□□□□□ -0.51
SPC25YER018C UBC1P21734 215 aaKnown RBP11.85□□□□□ -0.51
SPC25YER018C SSD1P24276 1250 aaKnown RBP RIP-Chip data11.85□□□□□ -0.51not detected
SPC25YER018C NAM7P30771 971 aaKnown RBP11.85□□□□□ -0.51
SPC25YER018C RME1P32338 300 aaKnown RBP11.85□□□□□ -0.51
SPC25YER018C EBP2P36049 427 aaKnown RBP11.85□□□□□ -0.51
SPC25YER018C MIP6P38760 659 aaKnown RBP11.85□□□□□ -0.51
SPC25YER018C CAF130P53280 1122 aaPredicted RBP11.85□□□□□ -0.51
SPC25YER018C RTT102P53330 157 aa11.85□□□□□ -0.51
SPC25YER018C VPS75P53853 264 aa11.85□□□□□ -0.51
SPC25YER018C DAK1P54838 584 aaKnown RBP11.85□□□□□ -0.51
SPC25YER018C COG4Q06096 861 aa11.85□□□□□ -0.51
SPC25YER018C OSW2Q12202 724 aa11.85□□□□□ -0.51
SPC25YER018C RPS6AP0CX37 236 aaKnown RBP11.84□□□□□ -0.51
SPC25YER018C RPS6BP0CX38 236 aaPredicted RBP11.84□□□□□ -0.51
SPC25YER018C EFT1P32324 842 aaKnown RBP11.84□□□□□ -0.51
SPC25YER018C SMY2P32909 740 aaKnown RBP11.84□□□□□ -0.51
SPC25YER018C MSC2Q03455 724 aa11.84□□□□□ -0.51
SPC25YER018C GIR2Q03768 265 aaPredicted RBP11.84□□□□□ -0.51
SPC25YER018C MAM3Q12296 706 aa11.84□□□□□ -0.51
SPC25YER018C PAH1P32567 862 aa11.83□□□□□ -0.52
SPC25YER018C UBP5P39944 805 aa11.83□□□□□ -0.52
SPC25YER018C PRY3P47033 881 aa11.83□□□□□ -0.52
SPC25YER018C TAM41P53230 385 aa11.83□□□□□ -0.52
SPC25YER018C TPO2P53283 614 aa11.83□□□□□ -0.52
SPC25YER018C MLH2Q07980 695 aa11.83□□□□□ -0.52
SPC25YER018C IES4Q08561 116 aa11.83□□□□□ -0.52
SPC25YER018C ATG11Q12527 1178 aa11.83□□□□□ -0.52
SPC25YER018C RTP1Q12751 981 aa11.83□□□□□ -0.52
SPC25YER018C SWI6P09959 803 aa11.82□□□□□ -0.52
SPC25YER018C SNA3P14359 133 aa11.82□□□□□ -0.52
SPC25YER018C CYC8P14922 966 aa11.82□□□□□ -0.52
SPC25YER018C MNN4P36044 1178 aa11.82□□□□□ -0.52
SPC25YER018C SHM1P37292 490 aaPredicted RBP11.82□□□□□ -0.52
SPC25YER018C GUA1P38625 525 aaKnown RBP11.82□□□□□ -0.52
SPC25YER018C RTT107P38850 1070 aa11.82□□□□□ -0.52
SPC25YER018C HIF1Q12373 385 aa11.82□□□□□ -0.52
SPC25YER018C CHS2P14180 963 aa11.81□□□□□ -0.52
SPC25YER018C PHO13P19881 312 aa11.81□□□□□ -0.52
SPC25YER018C SPO11P23179 398 aa11.81□□□□□ -0.52
SPC25YER018C APL1P27351 700 aa11.81□□□□□ -0.52
SPC25YER018C AFG3P39925 761 aa11.81□□□□□ -0.52
SPC25YER018C YNL146WP53906 100 aa11.81□□□□□ -0.52
SPC25YER018C VTC3Q02725 835 aa11.81□□□□□ -0.52
SPC25YER018C YDR090CQ03193 310 aa11.81□□□□□ -0.52
SPC25YER018C CWC2Q12046 339 aaPredicted RBP11.81□□□□□ -0.52
SPC25YER018C SSB1P11484 613 aaKnown RBP11.8□□□□□ -0.52
SPC25YER018C SSB2P40150 613 aaKnown RBP11.8□□□□□ -0.52
SPC25YER018C LCB2P40970 561 aa11.8□□□□□ -0.52
SPC25YER018C VPS62P53285 467 aa11.8□□□□□ -0.52
SPC25YER018C YML020WQ03722 664 aa11.8□□□□□ -0.52
SPC25YER018C YLR287CQ05881 355 aa11.8□□□□□ -0.52
SPC25YER018C HFI1Q12060 488 aa11.8□□□□□ -0.52
SPC25YER018C MDM20Q12387 796 aaKnown RBP11.8□□□□□ -0.52
SPC25YER018C AFT1P22149 690 aa11.79□□□□□ -0.52
SPC25YER018C MUD1P32605 298 aaKnown RBP11.79□□□□□ -0.52
SPC25YER018C MFT1P33441 392 aaKnown RBP11.79□□□□□ -0.52
SPC25YER018C SAD1P43589 448 aa11.79□□□□□ -0.52
SPC25YER018C CUL3P53202 744 aa11.79□□□□□ -0.52
SPC25YER018C TIM8P57744 87 aa11.79□□□□□ -0.52
SPC25YER018C VPS72Q03388 795 aa11.79□□□□□ -0.52
SPC25YER018C UTP14Q04500 899 aaKnown RBP11.79□□□□□ -0.52
SPC25YER018C RLP24Q07915 199 aaKnown RBP11.79□□□□□ -0.52
SPC25YER018C FAL1Q12099 399 aaKnown RBP11.79□□□□□ -0.52
SPC25YER018C RRP6Q12149 733 aaKnown RBP11.79□□□□□ -0.52
SPC25YER018C JJJ3P47138 172 aa11.78□□□□□ -0.52
SPC25YER018C STR2P47164 639 aa11.78□□□□□ -0.52
SPC25YER018C ATG9Q12142 997 aa11.78□□□□□ -0.52
SPC25YER018C XRS2P33301 854 aa11.77□□□□□ -0.53
SPC25YER018C KTR2P33550 425 aa11.77□□□□□ -0.53
SPC25YER018C MNR2P35724 969 aa11.77□□□□□ -0.53
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms