RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W SUM1P46676 1062 aa2.55□□□□□ -2
SPF1YEL031W ENT3P47160 408 aa2.55□□□□□ -2
SPF1YEL031W COS6P53344 381 aa2.55□□□□□ -2
SPF1YEL031W NAF1P53919 492 aaKnown RBP2.55□□□□□ -2
SPF1YEL031W RCF1Q03713 159 aa2.55□□□□□ -2
SPF1YEL031W SHE9Q04172 456 aa2.55□□□□□ -2
SPF1YEL031W CSR1Q06705 408 aaKnown RBP2.55□□□□□ -2
SPF1YEL031W TIP41Q12199 356 aa2.55□□□□□ -2
SPF1YEL031W YRF1-3P0CX14 1859 aa2.55□□□□□ -2
SPF1YEL031W YRF1-7P0CX15 1859 aa2.55□□□□□ -2
SPF1YEL031W YRF1-6P53819 1859 aa2.55□□□□□ -2
SPF1YEL031W IME1P21190 360 aa2.55□□□□□ -2
SPF1YEL031W GSY1P23337 708 aa2.55□□□□□ -2
SPF1YEL031W VAN1P23642 535 aa2.55□□□□□ -2
SPF1YEL031W PKC1P24583 1151 aa2.55□□□□□ -2
SPF1YEL031W PTC3P34221 468 aaKnown RBP2.55□□□□□ -2
SPF1YEL031W COY1P34237 679 aa2.55□□□□□ -2
SPF1YEL031W EDS1P38073 919 aa2.55□□□□□ -2
SPF1YEL031W SPC72P39723 622 aa2.55□□□□□ -2
SPF1YEL031W AXL1P40851 1208 aa2.55□□□□□ -2
SPF1YEL031W YGL176CP46945 554 aa2.55□□□□□ -2
SPF1YEL031W POL31P46957 487 aa2.55□□□□□ -2
SPF1YEL031W TOF1P53840 1238 aa2.55□□□□□ -2
SPF1YEL031W SHR3Q02774 210 aa2.55□□□□□ -2
SPF1YEL031W TMA64Q04600 565 aaKnown RBP2.55□□□□□ -2
SPF1YEL031W EST2Q06163 884 aa2.55□□□□□ -2
SPF1YEL031W YLR177WQ06251 628 aa2.55□□□□□ -2
SPF1YEL031W FRA1Q07825 749 aa2.55□□□□□ -2
SPF1YEL031W POM152P39685 1337 aa2.55□□□□□ -2
SPF1YEL031W SSA1P10591 642 aaKnown RBP2.54□□□□□ -2
SPF1YEL031W REC107P21651 314 aa2.54□□□□□ -2
SPF1YEL031W DAL7P21826 554 aa2.54□□□□□ -2
SPF1YEL031W YCR016WP25617 290 aaKnown RBP2.54□□□□□ -2
SPF1YEL031W IMP2'P32351 346 aa2.54□□□□□ -2
SPF1YEL031W SPT16P32558 1035 aaKnown RBP2.54□□□□□ -2
SPF1YEL031W YET1P35723 206 aa2.54□□□□□ -2
SPF1YEL031W PTC4P38089 393 aa2.54□□□□□ -2
SPF1YEL031W CCT2P39076 527 aaKnown RBP2.54□□□□□ -2
SPF1YEL031W TDA10P42938 290 aa2.54□□□□□ -2
SPF1YEL031W ESF2P53743 316 aaKnown RBP2.54□□□□□ -2
SPF1YEL031W ALO1P54783 526 aaKnown RBP2.54□□□□□ -2
SPF1YEL031W MEC3Q02574 474 aa2.54□□□□□ -2
SPF1YEL031W ECM23Q02710 187 aa2.54□□□□□ -2
SPF1YEL031W YPL109CQ02981 657 aa2.54□□□□□ -2
SPF1YEL031W YMR114CQ04471 368 aaKnown RBP2.54□□□□□ -2
SPF1YEL031W ECI1Q05871 280 aa2.54□□□□□ -2
SPF1YEL031W VIP1Q06685 1146 aaKnown RBP2.54□□□□□ -2
SPF1YEL031W MET7Q08645 548 aa2.54□□□□□ -2
SPF1YEL031W RKM1Q08961 583 aaPredicted RBP2.54□□□□□ -2
SPF1YEL031W GET3Q12154 354 aaKnown RBP2.54□□□□□ -2
SPF1YEL031W YOR111WQ99210 232 aa2.54□□□□□ -2
SPF1YEL031W STE6P12866 1290 aa2.54□□□□□ -2
SPF1YEL031W GCN3P14741 305 aa2.54□□□□□ -2
SPF1YEL031W KIP1P28742 1111 aa2.54□□□□□ -2
SPF1YEL031W MVD1P32377 396 aaKnown RBP2.54□□□□□ -2
SPF1YEL031W YRO2P38079 344 aa2.54□□□□□ -2
SPF1YEL031W ATG14P38270 344 aa2.54□□□□□ -2
SPF1YEL031W MIP6P38760 659 aaKnown RBP2.54□□□□□ -2
SPF1YEL031W RPN10P38886 268 aaKnown RBP2.54□□□□□ -2
SPF1YEL031W ALG5P40350 334 aa2.54□□□□□ -2
SPF1YEL031W STB1P42845 420 aa2.54□□□□□ -2
SPF1YEL031W TAF1P46677 1066 aa2.54□□□□□ -2
SPF1YEL031W MCM6P53091 1017 aaKnown RBP2.54□□□□□ -2
SPF1YEL031W PCL10P53124 433 aa2.54□□□□□ -2
SPF1YEL031W ORM1P53224 222 aa2.54□□□□□ -2
SPF1YEL031W COP1P53622 1201 aaKnown RBP2.54□□□□□ -2
SPF1YEL031W CSC1Q06538 782 aa2.54□□□□□ -2
SPF1YEL031W ALR1Q08269 859 aa2.54□□□□□ -2
SPF1YEL031W GET4Q12125 312 aa2.54□□□□□ -2
SPF1YEL031W ADR1P07248 1323 aa2.54□□□□□ -2
SPF1YEL031W TUS1Q06412 1307 aa2.54□□□□□ -2
SPF1YEL031W OM45P16547 393 aa2.54□□□□□ -2
SPF1YEL031W SPO16P17122 198 aa2.54□□□□□ -2
SPF1YEL031W SRV2P17555 526 aaKnown RBP2.54□□□□□ -2
SPF1YEL031W VPS1P21576 704 aaKnown RBP2.54□□□□□ -2
SPF1YEL031W PHO87P25360 923 aa2.54□□□□□ -2
SPF1YEL031W GLN1P32288 370 aaKnown RBP2.54□□□□□ -2
SPF1YEL031W HIR1P32479 840 aa2.54□□□□□ -2
SPF1YEL031W BCK2P33306 851 aa2.54□□□□□ -2
SPF1YEL031W SLA2P33338 968 aa2.54□□□□□ -2
SPF1YEL031W UTP11P34247 250 aaPredicted RBP2.54□□□□□ -2
SPF1YEL031W ERC1P38767 581 aa2.54□□□□□ -2
SPF1YEL031W SIT1P39980 628 aa2.54□□□□□ -2
SPF1YEL031W CAB2P40506 365 aa2.54□□□□□ -2
SPF1YEL031W DIM1P41819 318 aaKnown RBP2.54□□□□□ -2
SPF1YEL031W FMP33P46998 180 aa2.54□□□□□ -2
SPF1YEL031W GLG2P47011 380 aa2.54□□□□□ -2
SPF1YEL031W TY4A-JP47023 414 aa2.54□□□□□ -2
SPF1YEL031W RBL2P48606 106 aaKnown RBP2.54□□□□□ -2
SPF1YEL031W SQS1P53866 767 aaKnown RBP2.54□□□□□ -2
SPF1YEL031W UBP3Q01477 912 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
SPF1YEL031W SWP1Q02795 286 aa2.54□□□□□ -2
SPF1YEL031W DON1Q05610 365 aa2.54□□□□□ -2
SPF1YEL031W YPR078CQ06813 372 aa2.54□□□□□ -2
SPF1YEL031W YPR097WQ06839 1073 aa2.54□□□□□ -2
SPF1YEL031W BDF2Q07442 638 aa2.54□□□□□ -2
SPF1YEL031W RSA1Q08932 381 aa2.54□□□□□ -2
SPF1YEL031W TAH18Q12181 623 aa2.54□□□□□ -2
SPF1YEL031W RTP1Q12751 981 aa2.54□□□□□ -2
SPF1YEL031W LSO1Q3E827 93 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 39.5 ms