RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W ESC2Q06340 456 aa5.51□□□□□ -1.53
RPN9YDR427W ENB1Q08299 606 aa5.51□□□□□ -1.53
RPN9YDR427W KCS1Q12494 1050 aa5.51□□□□□ -1.53
RPN9YDR427W ABD1P32783 436 aaPredicted RBP5.5□□□□□ -1.53
RPN9YDR427W KRI1P42846 591 aaKnown RBP5.5□□□□□ -1.53
RPN9YDR427W SPP382Q06411 708 aaPredicted RBP5.5□□□□□ -1.53
RPN9YDR427W SSF2Q12153 453 aaPredicted RBP5.5□□□□□ -1.53
RPN9YDR427W PRI2P20457 528 aa5.49□□□□□ -1.53
RPN9YDR427W PIN4P34217 668 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
RPN9YDR427W YKL107WP34251 309 aa5.49□□□□□ -1.53
RPN9YDR427W SPF1P39986 1215 aaKnown RBP5.49□□□□□ -1.53
RPN9YDR427W STU2P46675 888 aa5.49□□□□□ -1.53
RPN9YDR427W YGL176CP46945 554 aa5.49□□□□□ -1.53
RPN9YDR427W SHE9Q04172 456 aa5.49□□□□□ -1.53
RPN9YDR427W OSW2Q12202 724 aa5.49□□□□□ -1.53
RPN9YDR427W EFT1P32324 842 aaKnown RBP5.47□□□□□ -1.53
RPN9YDR427W VBA5P36172 582 aa5.47□□□□□ -1.53
RPN9YDR427W ATF1P40353 525 aa5.47□□□□□ -1.53
RPN9YDR427W PSP2P50109 593 aaKnown RBP5.47□□□□□ -1.53
RPN9YDR427W MTC3P53077 123 aa5.47□□□□□ -1.53
RPN9YDR427W YGR012WP53206 393 aa5.47□□□□□ -1.53
RPN9YDR427W BDF2Q07442 638 aa5.47□□□□□ -1.53
RPN9YDR427W SNF7P39929 240 aaKnown RBP5.46□□□□□ -1.54
RPN9YDR427W TDA5Q06417 326 aaKnown RBP5.46□□□□□ -1.54
RPN9YDR427W XYL2Q07993 356 aa5.46□□□□□ -1.54
RPN9YDR427W WRS1Q12109 432 aaKnown RBP5.46□□□□□ -1.54
RPN9YDR427W NPC2Q12408 173 aa5.46□□□□□ -1.54
RPN9YDR427W SPE1P08432 466 aa5.45□□□□□ -1.54
RPN9YDR427W MRP8P35719 219 aa5.45□□□□□ -1.54
RPN9YDR427W YAP1801P38856 637 aa5.45□□□□□ -1.54
RPN9YDR427W CCC2P38995 1004 aa5.45□□□□□ -1.54
RPN9YDR427W SNM1P40993 198 aa5.45□□□□□ -1.54
RPN9YDR427W YOL073CQ08232 322 aa5.45□□□□□ -1.54
RPN9YDR427W MCH5Q08777 521 aa5.45□□□□□ -1.54
RPN9YDR427W GRX1P25373 110 aaKnown RBP5.44□□□□□ -1.54
RPN9YDR427W STE5P32917 917 aa5.44□□□□□ -1.54
RPN9YDR427W ATG19P35193 415 aa5.44□□□□□ -1.54
RPN9YDR427W YKL151CP36059 337 aa5.44□□□□□ -1.54
RPN9YDR427W SUL1P38359 859 aa5.44□□□□□ -1.54
RPN9YDR427W MBP1P39678 833 aa5.44□□□□□ -1.54
RPN9YDR427W QRI1P43123 477 aaKnown RBP5.44□□□□□ -1.54
RPN9YDR427W KTR4P38131 464 aa5.43□□□□□ -1.54
RPN9YDR427W NNF1P47149 201 aa5.43□□□□□ -1.54
RPN9YDR427W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
RPN9YDR427W TIM44Q01852 431 aa5.43□□□□□ -1.54
RPN9YDR427W OMS1Q06668 471 aa5.43□□□□□ -1.54
RPN9YDR427W CDA1Q06702 301 aa5.43□□□□□ -1.54
RPN9YDR427W YLR040CQ07988 224 aa5.43□□□□□ -1.54
RPN9YDR427W GUP2Q08929 609 aa5.43□□□□□ -1.54
RPN9YDR427W HSF1P10961 833 aa5.42□□□□□ -1.54
RPN9YDR427W PBY1P38254 753 aa5.42□□□□□ -1.54
RPN9YDR427W IRR1P40541 1150 aa5.42□□□□□ -1.54
RPN9YDR427W YJL049WP47048 450 aa5.42□□□□□ -1.54
RPN9YDR427W TMN2Q04562 672 aa5.42□□□□□ -1.54
RPN9YDR427W SRP101P32916 621 aa5.41□□□□□ -1.54
RPN9YDR427W YBR184WP38299 523 aa5.41□□□□□ -1.54
RPN9YDR427W OCA5P38738 679 aa5.41□□□□□ -1.54
RPN9YDR427W NCS6P53088 359 aa5.41□□□□□ -1.54
RPN9YDR427W NAN1Q02931 896 aaKnown RBP5.41□□□□□ -1.54
RPN9YDR427W HRQ1Q05549 1077 aa5.41□□□□□ -1.54
RPN9YDR427W YLL058WQ12198 575 aa5.41□□□□□ -1.54
RPN9YDR427W CUE2P36075 443 aaKnown RBP5.4□□□□□ -1.54
RPN9YDR427W URM1P40554 99 aaPredicted RBP5.4□□□□□ -1.54
RPN9YDR427W PFD1P46988 109 aa5.4□□□□□ -1.54
RPN9YDR427W FMP25Q08023 583 aa5.4□□□□□ -1.54
RPN9YDR427W MDM38Q08179 573 aa5.4□□□□□ -1.54
RPN9YDR427W ACF2Q12168 779 aa5.4□□□□□ -1.54
RPN9YDR427W LAS17Q12446 633 aa5.4□□□□□ -1.54
RPN9YDR427W CAD1P24813 409 aaKnown RBP5.39□□□□□ -1.55
RPN9YDR427W KAR4P25583 335 aa5.39□□□□□ -1.55
RPN9YDR427W GUS1P46655 708 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
RPN9YDR427W LGE1Q02796 332 aaKnown RBP5.39□□□□□ -1.55
RPN9YDR427W CDC12P32468 407 aaKnown RBP5.38□□□□□ -1.55
RPN9YDR427W ECM21P38167 1117 aaKnown RBP5.38□□□□□ -1.55
RPN9YDR427W STB4P50104 949 aa5.38□□□□□ -1.55
RPN9YDR427W IRC10Q08118 586 aa5.38□□□□□ -1.55
RPN9YDR427W RAD4P14736 754 aa5.37□□□□□ -1.55
RPN9YDR427W RPL8BP29453 256 aaKnown RBP5.37□□□□□ -1.55
RPN9YDR427W BUL1P48524 976 aa5.37□□□□□ -1.55
RPN9YDR427W UTP8P53276 713 aaKnown RBP5.37□□□□□ -1.55
RPN9YDR427W SRT1Q03175 343 aa5.37□□□□□ -1.55
RPN9YDR427W ERG4P25340 473 aa5.36□□□□□ -1.55
RPN9YDR427W GIC1P38785 314 aa5.36□□□□□ -1.55
RPN9YDR427W FUN30P31380 1131 aa5.35□□□□□ -1.55
RPN9YDR427W HBS1P32769 611 aaKnown RBP5.35□□□□□ -1.55
RPN9YDR427W SAH1P39954 449 aaKnown RBP5.35□□□□□ -1.55
RPN9YDR427W RNT1Q02555 471 aa5.35□□□□□ -1.55
RPN9YDR427W SRP1Q02821 542 aaKnown RBP5.35□□□□□ -1.55
RPN9YDR427W NSE3Q05541 303 aa5.35□□□□□ -1.55
RPN9YDR427W DUS3Q06053 668 aaKnown RBP5.35□□□□□ -1.55
RPN9YDR427W SPO75Q07798 868 aa5.35□□□□□ -1.55
RPN9YDR427W YOL098CQ12496 1037 aa5.35□□□□□ -1.55
RPN9YDR427W PRP9P19736 530 aaKnown RBP5.34□□□□□ -1.55
RPN9YDR427W YHR020WP38708 688 aaKnown RBP5.34□□□□□ -1.55
RPN9YDR427W SIT1P39980 628 aa5.34□□□□□ -1.55
RPN9YDR427W NPP2P39997 493 aa5.34□□□□□ -1.55
RPN9YDR427W YMR206WQ03695 313 aa5.34□□□□□ -1.55
RPN9YDR427W TRP4P07285 380 aaPredicted RBP5.33□□□□□ -1.56
RPN9YDR427W HUL5P53119 910 aa5.33□□□□□ -1.56
RPN9YDR427W YDR306CQ06640 478 aa5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms