RNA–Protein interactions for RNA: YDR339C

FCF1, Transcript of Putative PINc domain nuclease, yeast

Gene FCF1, Length 570 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FCF1	YDR339C	IOC3	P43596	787 aa		4.96	□□□□□ -1.62
FCF1	YDR339C	ADY3	Q07732	790 aa		4.96	□□□□□ -1.62
FCF1	YDR339C	MET12	P46151	657 aa		4.95	□□□□□ -1.62
FCF1	YDR339C	ALG12	P53730	551 aa		4.95	□□□□□ -1.62
FCF1	YDR339C	YPL066W	Q12194	479 aa		4.95	□□□□□ -1.62
FCF1	YDR339C	HIS5	P07172	385 aa		4.94	□□□□□ -1.62
FCF1	YDR339C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
FCF1	YDR339C	BDF2	Q07442	638 aa		4.94	□□□□□ -1.62
FCF1	YDR339C	TRP2	P00899	507 aa	Known RBP	4.93	□□□□□ -1.62
FCF1	YDR339C	CIT2	P08679	460 aa		4.93	□□□□□ -1.62
FCF1	YDR339C	CDC34	P14682	295 aa		4.93	□□□□□ -1.62
FCF1	YDR339C	SCT1	P32784	759 aa		4.93	□□□□□ -1.62
FCF1	YDR339C	DUT1	P33317	147 aa		4.93	□□□□□ -1.62
FCF1	YDR339C	YKL151C	P36059	337 aa		4.93	□□□□□ -1.62
FCF1	YDR339C	CHA4	P43634	648 aa		4.93	□□□□□ -1.62
FCF1	YDR339C	NAN1	Q02931	896 aa	Known RBP	4.93	□□□□□ -1.62
FCF1	YDR339C	INO1	P11986	533 aa		4.92	□□□□□ -1.62
FCF1	YDR339C	RAD53	P22216	821 aa		4.92	□□□□□ -1.62
FCF1	YDR339C	LYP1	P32487	611 aa		4.92	□□□□□ -1.62
FCF1	YDR339C	YPT53	P36019	220 aa		4.92	□□□□□ -1.62
FCF1	YDR339C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
FCF1	YDR339C	BUD6	P41697	788 aa		4.92	□□□□□ -1.62
FCF1	YDR339C	YGL176C	P46945	554 aa		4.92	□□□□□ -1.62
FCF1	YDR339C	EEB1	Q02891	456 aa		4.92	□□□□□ -1.62
FCF1	YDR339C	GDE1	Q02979	1223 aa		4.92	□□□□□ -1.62
FCF1	YDR339C	TMA46	Q12000	345 aa	Known RBP	4.92	□□□□□ -1.62
FCF1	YDR339C	THS1	P04801	734 aa	Known RBP	4.91	□□□□□ -1.62
FCF1	YDR339C	YAP1801	P38856	637 aa		4.91	□□□□□ -1.62
FCF1	YDR339C	CHZ1	P40019	153 aa	Predicted RBP	4.91	□□□□□ -1.62
FCF1	YDR339C	OSW2	Q12202	724 aa		4.91	□□□□□ -1.62
FCF1	YDR339C	KCS1	Q12494	1050 aa		4.91	□□□□□ -1.62
FCF1	YDR339C	MET6	P05694	767 aa	Known RBP	4.9	□□□□□ -1.63
FCF1	YDR339C	PFK1	P16861	987 aa	Known RBP	4.9	□□□□□ -1.63
FCF1	YDR339C	GRX1	P25373	110 aa	Known RBP	4.9	□□□□□ -1.63
FCF1	YDR339C	EXG2	P52911	562 aa		4.9	□□□□□ -1.63
FCF1	YDR339C	TYW3	P53177	273 aa		4.9	□□□□□ -1.63
FCF1	YDR339C	HRQ1	Q05549	1077 aa		4.9	□□□□□ -1.63
FCF1	YDR339C	YLR225C	Q05948	407 aa	Known RBP	4.9	□□□□□ -1.63
FCF1	YDR339C	TDA5	Q06417	326 aa	Known RBP	4.9	□□□□□ -1.63
FCF1	YDR339C	YGR161W-C	Q3E744	92 aa		4.9	□□□□□ -1.63
FCF1	YDR339C	HRR25	P29295	494 aa	Known RBP	4.89	□□□□□ -1.63
FCF1	YDR339C	SRP101	P32916	621 aa		4.89	□□□□□ -1.63
FCF1	YDR339C	NOP2	P40991	618 aa	Known RBP	4.89	□□□□□ -1.63
FCF1	YDR339C	YGR012W	P53206	393 aa		4.89	□□□□□ -1.63
FCF1	YDR339C	YGR053C	P53234	283 aa		4.89	□□□□□ -1.63
FCF1	YDR339C	CDA1	Q06702	301 aa		4.89	□□□□□ -1.63
FCF1	YDR339C	OPI10	Q08202	246 aa		4.89	□□□□□ -1.63
FCF1	YDR339C	AIM39	Q08223	395 aa		4.89	□□□□□ -1.63
FCF1	YDR339C	YLR125W	Q12138	136 aa		4.89	□□□□□ -1.63
FCF1	YDR339C	TOM20	P35180	183 aa		4.88	□□□□□ -1.63
FCF1	YDR339C	GGA2	P38817	585 aa	Known RBP	4.88	□□□□□ -1.63
FCF1	YDR339C	SPF1	P39986	1215 aa	Known RBP	4.88	□□□□□ -1.63
FCF1	YDR339C	MDM38	Q08179	573 aa		4.88	□□□□□ -1.63
FCF1	YDR339C	LAS17	Q12446	633 aa		4.88	□□□□□ -1.63
FCF1	YDR339C	SSB1	P11484	613 aa	Known RBP	4.87	□□□□□ -1.63
FCF1	YDR339C	RAD4	P14736	754 aa		4.87	□□□□□ -1.63
FCF1	YDR339C	TSR4	P25040	408 aa		4.87	□□□□□ -1.63
FCF1	YDR339C	SNF7	P39929	240 aa	Known RBP	4.87	□□□□□ -1.63
FCF1	YDR339C	SSB2	P40150	613 aa	Known RBP	4.87	□□□□□ -1.63
FCF1	YDR339C	TIM54	P47045	478 aa		4.87	□□□□□ -1.63
FCF1	YDR339C	FAA4	P47912	694 aa	Known RBP	4.87	□□□□□ -1.63
FCF1	YDR339C	HUL5	P53119	910 aa		4.87	□□□□□ -1.63
FCF1	YDR339C	RTS3	P53289	263 aa		4.87	□□□□□ -1.63
FCF1	YDR339C	ESC2	Q06340	456 aa		4.87	□□□□□ -1.63
FCF1	YDR339C	URN1	Q06525	465 aa	Known RBP	4.87	□□□□□ -1.63
FCF1	YDR339C	WHI4	Q07655	649 aa	Known RBP	4.87	□□□□□ -1.63
FCF1	YDR339C	SPO75	Q07798	868 aa		4.87	□□□□□ -1.63
FCF1	YDR339C	PPM2	Q08282	695 aa		4.87	□□□□□ -1.63
FCF1	YDR339C	FAL1	Q12099	399 aa	Known RBP	4.87	□□□□□ -1.63
FCF1	YDR339C	OSH2	Q12451	1283 aa		4.87	□□□□□ -1.63
FCF1	YDR339C	SPE1	P08432	466 aa		4.86	□□□□□ -1.63
FCF1	YDR339C	PHO8	P11491	566 aa		4.86	□□□□□ -1.63
FCF1	YDR339C	YKL107W	P34251	309 aa		4.86	□□□□□ -1.63
FCF1	YDR339C	ECM21	P38167	1117 aa	Known RBP	4.86	□□□□□ -1.63
FCF1	YDR339C	MNN1	P39106	762 aa		4.86	□□□□□ -1.63
FCF1	YDR339C	YML122C	Q03207	126 aa		4.86	□□□□□ -1.63
FCF1	YDR339C	RKM4	Q12504	494 aa		4.86	□□□□□ -1.63
FCF1	YDR339C	GAL11	P19659	1081 aa		4.85	□□□□□ -1.63
FCF1	YDR339C	MOH1	P38191	138 aa		4.85	□□□□□ -1.63
FCF1	YDR339C	GIC1	P38785	314 aa		4.85	□□□□□ -1.63
FCF1	YDR339C	NPP2	P39997	493 aa		4.85	□□□□□ -1.63
FCF1	YDR339C	NUP82	P40368	713 aa		4.85	□□□□□ -1.63
FCF1	YDR339C	SRT1	Q03175	343 aa		4.85	□□□□□ -1.63
FCF1	YDR339C	SPO20	Q04359	397 aa		4.85	□□□□□ -1.63
FCF1	YDR339C	NPC2	Q12408	173 aa		4.85	□□□□□ -1.63
FCF1	YDR339C	MRP8	P35719	219 aa		4.84	□□□□□ -1.63
FCF1	YDR339C	UBX5	Q06682	500 aa		4.84	□□□□□ -1.63
FCF1	YDR339C	PRI2	P20457	528 aa		4.83	□□□□□ -1.64
FCF1	YDR339C	AGP1	P25376	633 aa		4.83	□□□□□ -1.64
FCF1	YDR339C	CCC2	P38995	1004 aa		4.83	□□□□□ -1.64
FCF1	YDR339C	SAH1	P39954	449 aa	Known RBP	4.83	□□□□□ -1.64
FCF1	YDR339C	NUG1	P40010	520 aa	Known RBP	4.83	□□□□□ -1.64
FCF1	YDR339C	NCS6	P53088	359 aa		4.83	□□□□□ -1.64
FCF1	YDR339C	SFB2	P53953	876 aa		4.83	□□□□□ -1.64
FCF1	YDR339C	SHE9	Q04172	456 aa		4.83	□□□□□ -1.64
FCF1	YDR339C	FLC1	Q08967	793 aa		4.83	□□□□□ -1.64
FCF1	YDR339C	HSP60	P19882	572 aa	Known RBP	4.82	□□□□□ -1.64
FCF1	YDR339C	KAR4	P25583	335 aa		4.82	□□□□□ -1.64
FCF1	YDR339C	SBA1	P28707	216 aa	Known RBP	4.82	□□□□□ -1.64
FCF1	YDR339C	OAR1	P35731	278 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms