RNA–Protein interactions for RNA: YDR280W

RRP45, Transcript of Exosome non-catalytic core component, yeast

Gene RRP45, Length 918 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP45	YDR280W	RPL8B	P29453	256 aa	Known RBP	5.88	□□□□□ -1.47
RRP45	YDR280W	YHL026C	P38740	315 aa		5.88	□□□□□ -1.47
RRP45	YDR280W	YNG2	P38806	282 aa	Known RBP	5.88	□□□□□ -1.47
RRP45	YDR280W	NMD3	P38861	518 aa	Known RBP	5.88	□□□□□ -1.47
RRP45	YDR280W	FMO1	P38866	432 aa		5.88	□□□□□ -1.47
RRP45	YDR280W	YHR202W	P38887	602 aa		5.88	□□□□□ -1.47
RRP45	YDR280W	YEL025C	P39991	1188 aa		5.88	□□□□□ -1.47
RRP45	YDR280W	NNF1	P47149	201 aa		5.88	□□□□□ -1.47
RRP45	YDR280W	RTS3	P53289	263 aa		5.88	□□□□□ -1.47
RRP45	YDR280W	SPO1	P53541	631 aa		5.88	□□□□□ -1.47
RRP45	YDR280W	RPS15	Q01855	142 aa	Known RBP	5.88	□□□□□ -1.47
RRP45	YDR280W	GYL1	Q04322	720 aa		5.88	□□□□□ -1.47
RRP45	YDR280W	GPI13	Q07830	1017 aa		5.88	□□□□□ -1.47
RRP45	YDR280W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	5.88	□□□□□ -1.47	not detected
RRP45	YDR280W	NOT3	P06102	836 aa	Known RBP	5.87	□□□□□ -1.47
RRP45	YDR280W	PDR3	P33200	976 aa		5.87	□□□□□ -1.47
RRP45	YDR280W	RFC1	P38630	861 aa	Known RBP	5.87	□□□□□ -1.47
RRP45	YDR280W	OSH3	P38713	996 aa	Known RBP	5.87	□□□□□ -1.47
RRP45	YDR280W	ZAP1	P47043	880 aa		5.87	□□□□□ -1.47
RRP45	YDR280W	FAA4	P47912	694 aa	Known RBP	5.87	□□□□□ -1.47
RRP45	YDR280W	RPT6	Q01939	405 aa	Known RBP	5.87	□□□□□ -1.47
RRP45	YDR280W	EAF1	Q06337	982 aa		5.87	□□□□□ -1.47
RRP45	YDR280W	SGF29	P25554	259 aa		5.86	□□□□□ -1.47
RRP45	YDR280W	CLB5	P30283	435 aa		5.86	□□□□□ -1.47
RRP45	YDR280W	ECM32	P32644	1121 aa	Known RBP	5.86	□□□□□ -1.47
RRP45	YDR280W	GCS1	P35197	352 aa		5.86	□□□□□ -1.47
RRP45	YDR280W	DID4	P36108	232 aa		5.86	□□□□□ -1.47
RRP45	YDR280W	UBX7	P38349	436 aa		5.86	□□□□□ -1.47
RRP45	YDR280W	YAP1801	P38856	637 aa		5.86	□□□□□ -1.47
RRP45	YDR280W	FAA3	P39002	694 aa		5.86	□□□□□ -1.47
RRP45	YDR280W	LSB6	P42951	607 aa		5.86	□□□□□ -1.47
RRP45	YDR280W	BDP1	P46678	594 aa		5.86	□□□□□ -1.47
RRP45	YDR280W	YNL134C	P53912	376 aa	Known RBP	5.86	□□□□□ -1.47
RRP45	YDR280W	UFD2	P54860	961 aa		5.86	□□□□□ -1.47
RRP45	YDR280W	YPL062W	Q02781	134 aa		5.86	□□□□□ -1.47
RRP45	YDR280W	MRI1	Q06489	411 aa	Known RBP	5.86	□□□□□ -1.47
RRP45	YDR280W	BUD20	Q08004	166 aa	Predicted RBP	5.86	□□□□□ -1.47
RRP45	YDR280W	YRR1	Q12172	810 aa		5.86	□□□□□ -1.47
RRP45	YDR280W	PCD1	Q12524	340 aa		5.86	□□□□□ -1.47
RRP45	YDR280W	CSF1	Q12150	2958 aa		5.86	□□□□□ -1.47
RRP45	YDR280W	HMG2	P12684	1045 aa		5.85	□□□□□ -1.47
RRP45	YDR280W	SRP54	P20424	541 aa	Known RBP	5.85	□□□□□ -1.47
RRP45	YDR280W	ALT2	P52892	507 aa		5.85	□□□□□ -1.47
RRP45	YDR280W	HUL5	P53119	910 aa		5.85	□□□□□ -1.47
RRP45	YDR280W	PIB2	P53191	635 aa		5.85	□□□□□ -1.47
RRP45	YDR280W	NOB1	Q08444	459 aa	Known RBP	5.85	□□□□□ -1.47
RRP45	YDR280W	PDR18	P53756	1333 aa		5.84	□□□□□ -1.47
RRP45	YDR280W	RPS14A	P06367	137 aa	Known RBP	5.84	□□□□□ -1.47
RRP45	YDR280W	PCK1	P10963	549 aa		5.84	□□□□□ -1.47
RRP45	YDR280W	ANP1	P32629	500 aa		5.84	□□□□□ -1.47
RRP45	YDR280W	SWE1	P32944	819 aa		5.84	□□□□□ -1.47
RRP45	YDR280W	YPT35	P38815	214 aa	Known RBP	5.84	□□□□□ -1.47
RRP45	YDR280W	RPS14B	P39516	138 aa	Known RBP	5.84	□□□□□ -1.47
RRP45	YDR280W	LSB3	P43603	459 aa	Known RBP	5.84	□□□□□ -1.47
RRP45	YDR280W	OSW7	P43611	510 aa		5.84	□□□□□ -1.47
RRP45	YDR280W	TAM41	P53230	385 aa		5.84	□□□□□ -1.47
RRP45	YDR280W	SFB2	P53953	876 aa		5.84	□□□□□ -1.47
RRP45	YDR280W	LEE1	Q02799	301 aa	Known RBP	5.84	□□□□□ -1.47
RRP45	YDR280W	MEC1	P38111	2368 aa		5.83	□□□□□ -1.48
RRP45	YDR280W	SPE1	P08432	466 aa		5.83	□□□□□ -1.48
RRP45	YDR280W	RPL8A	P17076	256 aa	Known RBP	5.83	□□□□□ -1.48
RRP45	YDR280W	PSE1	P32337	1089 aa	Known RBP	5.83	□□□□□ -1.48
RRP45	YDR280W	BIO2	P32451	375 aa		5.83	□□□□□ -1.48
RRP45	YDR280W	MET1	P36150	593 aa		5.83	□□□□□ -1.48
RRP45	YDR280W	CCL1	P37366	393 aa		5.83	□□□□□ -1.48
RRP45	YDR280W	ECM21	P38167	1117 aa	Known RBP	5.83	□□□□□ -1.48
RRP45	YDR280W	YBL036C	P38197	257 aa		5.83	□□□□□ -1.48
RRP45	YDR280W	NIS1	P53939	407 aa		5.83	□□□□□ -1.48
RRP45	YDR280W	YDR090C	Q03193	310 aa		5.83	□□□□□ -1.48
RRP45	YDR280W	MYO5	Q04439	1219 aa	Known RBP	5.83	□□□□□ -1.48
RRP45	YDR280W	WHI4	Q07655	649 aa	Known RBP	5.83	□□□□□ -1.48
RRP45	YDR280W	SES1	P07284	462 aa	Known RBP	5.82	□□□□□ -1.48
RRP45	YDR280W	FUS1	P11710	512 aa		5.82	□□□□□ -1.48
RRP45	YDR280W	ADE2	P21264	571 aa	Known RBP	5.82	□□□□□ -1.48
RRP45	YDR280W	PWP2	P25635	923 aa	Known RBP	5.82	□□□□□ -1.48
RRP45	YDR280W	RAD27	P26793	382 aa		5.82	□□□□□ -1.48
RRP45	YDR280W	PAN5	P38787	379 aa		5.82	□□□□□ -1.48
RRP45	YDR280W	BRE2	P43132	505 aa		5.82	□□□□□ -1.48
RRP45	YDR280W	ATG36	P46983	293 aa		5.82	□□□□□ -1.48
RRP45	YDR280W	MDM1	Q01846	1127 aa		5.82	□□□□□ -1.48
RRP45	YDR280W	OPI1	P21957	404 aa		5.81	□□□□□ -1.48
RRP45	YDR280W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	5.81	□□□□□ -1.48	RIP-Chip
RRP45	YDR280W	TPM2	P40414	161 aa		5.81	□□□□□ -1.48
RRP45	YDR280W	GDE1	Q02979	1223 aa		5.81	□□□□□ -1.48
RRP45	YDR280W	NSE5	Q03718	556 aa		5.81	□□□□□ -1.48
RRP45	YDR280W	ARP6	Q12509	438 aa		5.81	□□□□□ -1.48
RRP45	YDR280W	MAK31	P23059	88 aa		5.8	□□□□□ -1.48
RRP45	YDR280W	EFT1	P32324	842 aa	Known RBP	5.8	□□□□□ -1.48
RRP45	YDR280W	CSE2	P33308	149 aa		5.8	□□□□□ -1.48
RRP45	YDR280W	YHM2	Q04013	314 aa		5.8	□□□□□ -1.48
RRP45	YDR280W	HIF1	Q12373	385 aa		5.8	□□□□□ -1.48
RRP45	YDR280W	BRR2	P32639	2163 aa	Known RBP	5.79	□□□□□ -1.48
RRP45	YDR280W	MAK16	P10962	306 aa	Predicted RBP	5.79	□□□□□ -1.48
RRP45	YDR280W	WHI2	P12611	486 aa		5.79	□□□□□ -1.48
RRP45	YDR280W	PAT1	P25644	796 aa	Known RBP	5.79	□□□□□ -1.48
RRP45	YDR280W	NUD1	P32336	851 aa		5.79	□□□□□ -1.48
RRP45	YDR280W	SPT16	P32558	1035 aa	Known RBP	5.79	□□□□□ -1.48
RRP45	YDR280W	UBP11	P36026	717 aa		5.79	□□□□□ -1.48
RRP45	YDR280W	VID28	P40547	921 aa		5.79	□□□□□ -1.48
RRP45	YDR280W	ACF4	P47129	309 aa		5.79	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms