RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C MRL1Q06815 381 aa1.44□□□□□ -2.18
SEC1YDR164C RPL11AP0C0W9 174 aaKnown RBP1.44□□□□□ -2.18
SEC1YDR164C FLO10P36170 1169 aa1.44□□□□□ -2.18
SEC1YDR164C RPL11BQ3E757 174 aaPredicted RBP1.44□□□□□ -2.18
SEC1YDR164C HXK1P04806 485 aaKnown RBP1.43□□□□□ -2.18
SEC1YDR164C MET3P08536 511 aa1.43□□□□□ -2.18
SEC1YDR164C DBP2P24783 546 aaKnown RBP1.43□□□□□ -2.18
SEC1YDR164C SED4P25365 1065 aa1.43□□□□□ -2.18
SEC1YDR164C SLA2P33338 968 aa1.43□□□□□ -2.18
SEC1YDR164C PPS1P38148 807 aa1.43□□□□□ -2.18
SEC1YDR164C PPX1P38698 397 aa1.43□□□□□ -2.18
SEC1YDR164C YHL017WP38745 532 aa1.43□□□□□ -2.18
SEC1YDR164C STM1P39015 273 aaKnown RBP1.43□□□□□ -2.18
SEC1YDR164C YLL058WQ12198 575 aa1.43□□□□□ -2.18
SEC1YDR164C RPC82P32349 654 aa1.42□□□□□ -2.18
SEC1YDR164C RPT1P33299 467 aaKnown RBP1.42□□□□□ -2.18
SEC1YDR164C URM1P40554 99 aaPredicted RBP1.42□□□□□ -2.18
SEC1YDR164C MPH1P40562 993 aa1.42□□□□□ -2.18
SEC1YDR164C TMA46Q12000 345 aaKnown RBP1.42□□□□□ -2.18
SEC1YDR164C TAH11P47112 604 aa1.42□□□□□ -2.18
SEC1YDR164C YGR122WP53272 402 aa1.42□□□□□ -2.18
SEC1YDR164C MET6P05694 767 aaKnown RBP1.41□□□□□ -2.18
SEC1YDR164C FUN30P31380 1131 aa1.41□□□□□ -2.18
SEC1YDR164C ECM21P38167 1117 aaKnown RBP1.41□□□□□ -2.18
SEC1YDR164C KRI1P42846 591 aaKnown RBP1.41□□□□□ -2.18
SEC1YDR164C MTC3P53077 123 aa1.41□□□□□ -2.18
SEC1YDR164C VPS30Q02948 557 aa1.41□□□□□ -2.18
SEC1YDR164C SEC20P28791 383 aa1.41□□□□□ -2.18
SEC1YDR164C PNT1P38969 423 aa1.41□□□□□ -2.18
SEC1YDR164C HXT13P39924 564 aa1.41□□□□□ -2.18
SEC1YDR164C YIL166CP40445 542 aa1.41□□□□□ -2.18
SEC1YDR164C GAT1P43574 510 aa1.41□□□□□ -2.18
SEC1YDR164C VPS73P53142 486 aaKnown RBP1.41□□□□□ -2.18
SEC1YDR164C HXT17P53631 564 aa1.41□□□□□ -2.18
SEC1YDR164C HXT15P54854 567 aa1.41□□□□□ -2.18
SEC1YDR164C DLT1Q04216 342 aa1.41□□□□□ -2.18
SEC1YDR164C ARO10Q06408 635 aa1.41□□□□□ -2.18
SEC1YDR164C FRE5Q08908 694 aa1.41□□□□□ -2.18
SEC1YDR164C RAD2P07276 1031 aa1.4□□□□□ -2.19
SEC1YDR164C DMC1P25453 334 aa1.4□□□□□ -2.19
SEC1YDR164C MET4P32389 672 aa1.4□□□□□ -2.19
SEC1YDR164C SRP1Q02821 542 aaKnown RBP1.4□□□□□ -2.19
SEC1YDR164C TIF35Q04067 274 aaKnown RBP1.4□□□□□ -2.19
SEC1YDR164C MSC6Q08818 692 aaKnown RBP1.4□□□□□ -2.19
SEC1YDR164C KIN3P22209 435 aa1.4□□□□□ -2.19
SEC1YDR164C SAH1P39954 449 aaKnown RBP1.4□□□□□ -2.19
SEC1YDR164C SRT1Q03175 343 aa1.4□□□□□ -2.19
SEC1YDR164C YPR196WQ06595 470 aa1.4□□□□□ -2.19
SEC1YDR164C MDM38Q08179 573 aa1.4□□□□□ -2.19
SEC1YDR164C RTT10Q08924 1013 aa1.4□□□□□ -2.19
SEC1YDR164C UPC2Q12151 913 aa1.4□□□□□ -2.19
SEC1YDR164C CAF20P12962 161 aaKnown RBP1.39□□□□□ -2.19
SEC1YDR164C YUR1P26725 428 aa1.39□□□□□ -2.19
SEC1YDR164C SCT1P32784 759 aa1.39□□□□□ -2.19
SEC1YDR164C SLD2P34252 453 aa1.39□□□□□ -2.19
SEC1YDR164C MGE1P38523 228 aa1.39□□□□□ -2.19
SEC1YDR164C DAM1P53267 343 aa1.39□□□□□ -2.19
SEC1YDR164C CRR1Q05790 422 aa1.39□□□□□ -2.19
SEC1YDR164C PEX19Q07418 342 aa1.39□□□□□ -2.19
SEC1YDR164C RKM4Q12504 494 aa1.39□□□□□ -2.19
SEC1YDR164C GCR1P07261 785 aa1.38□□□□□ -2.19
SEC1YDR164C ADY2P25613 283 aa1.38□□□□□ -2.19
SEC1YDR164C ORC2P32833 620 aa1.38□□□□□ -2.19
SEC1YDR164C RGT1P32862 1170 aa1.38□□□□□ -2.19
SEC1YDR164C YKL107WP34251 309 aa1.38□□□□□ -2.19
SEC1YDR164C RER2P35196 286 aa1.38□□□□□ -2.19
SEC1YDR164C PCL5P38794 229 aa1.38□□□□□ -2.19
SEC1YDR164C GNP1P48813 663 aa1.38□□□□□ -2.19
SEC1YDR164C APM1Q00776 475 aaPredicted RBP1.38□□□□□ -2.19
SEC1YDR164C SWM1Q12379 170 aa1.38□□□□□ -2.19
SEC1YDR164C SPO11P23179 398 aa1.38□□□□□ -2.19
SEC1YDR164C ELO3P40319 345 aa1.38□□□□□ -2.19
SEC1YDR164C RAI1P53063 387 aaKnown RBP1.38□□□□□ -2.19
SEC1YDR164C RIA1P53893 1110 aa1.38□□□□□ -2.19
SEC1YDR164C ERG5P54781 538 aa1.38□□□□□ -2.19
SEC1YDR164C SLU7Q02775 382 aaKnown RBP1.38□□□□□ -2.19
SEC1YDR164C SPO20Q04359 397 aa1.38□□□□□ -2.19
SEC1YDR164C TRM11Q12463 433 aa1.38□□□□□ -2.19
SEC1YDR164C CYC8P14922 966 aa1.37□□□□□ -2.19
SEC1YDR164C LYP1P32487 611 aa1.37□□□□□ -2.19
SEC1YDR164C NGG1P32494 702 aa1.37□□□□□ -2.19
SEC1YDR164C RPS26AP39938 119 aaKnown RBP1.37□□□□□ -2.19
SEC1YDR164C RPS26BP39939 119 aaKnown RBP1.37□□□□□ -2.19
SEC1YDR164C PUS2P53167 370 aa1.37□□□□□ -2.19
SEC1YDR164C INO1P11986 533 aa1.37□□□□□ -2.19
SEC1YDR164C STE14P32584 239 aa1.37□□□□□ -2.19
SEC1YDR164C GIC1P38785 314 aa1.37□□□□□ -2.19
SEC1YDR164C STB2P46679 850 aa1.37□□□□□ -2.19
SEC1YDR164C AMA1P50082 593 aa1.37□□□□□ -2.19
SEC1YDR164C HRQ1Q05549 1077 aa1.37□□□□□ -2.19
SEC1YDR164C ADY4Q05955 493 aa1.37□□□□□ -2.19
SEC1YDR164C ESF1Q06344 628 aaKnown RBP1.37□□□□□ -2.19
SEC1YDR164C RPN13O13563 156 aa1.36□□□□□ -2.19
SEC1YDR164C PIN4P34217 668 aaKnown RBP RIP-Chip data1.36□□□□□ -2.19not detected
SEC1YDR164C YKL151CP36059 337 aa1.36□□□□□ -2.19
SEC1YDR164C MRI1Q06489 411 aaKnown RBP1.36□□□□□ -2.19
SEC1YDR164C PTP1P25044 335 aa1.35□□□□□ -2.19
SEC1YDR164C CTF13P35203 478 aa1.35□□□□□ -2.19
SEC1YDR164C CBR1P38626 284 aaKnown RBP1.35□□□□□ -2.19
SEC1YDR164C YGL176CP46945 554 aa1.35□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 39 ms